RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 BMP2P12643 396 aa13.37□□□□□ -0.27
SEC23A-201ENST00000307712 AXLP30530 894 aa13.37□□□□□ -0.27
SEC23A-201ENST00000307712 BRCC3P46736 316 aa13.37□□□□□ -0.27
SEC23A-201ENST00000307712 PRIM2P49643 509 aa13.37□□□□□ -0.27
SEC23A-201ENST00000307712 MAD2L1Q13257 205 aaPredicted RBP13.37□□□□□ -0.27
SEC23A-201ENST00000307712 RFX4Q33E94 735 aa13.37□□□□□ -0.27
SEC23A-201ENST00000307712 NPWQ8N729 165 aa13.37□□□□□ -0.27
SEC23A-201ENST00000307712 OR4K2Q8NGD2 314 aa13.37□□□□□ -0.27
SEC23A-201ENST00000307712 CDK15Q96Q40 435 aa13.37□□□□□ -0.27
SEC23A-201ENST00000307712 TRIM39Q9HCM9 518 aa13.37□□□□□ -0.27
SEC23A-201ENST00000307712 TRMT13Q9NUP7 481 aaKnown RBP13.37□□□□□ -0.27
SEC23A-201ENST00000307712 KCTD3Q9Y597 815 aa13.37□□□□□ -0.27
SEC23A-201ENST00000307712 NRCAMQ92823 1304 aa13.37□□□□□ -0.27
SEC23A-201ENST00000307712 ELOVL7A1L3X0 281 aa13.37□□□□□ -0.27
SEC23A-201ENST00000307712 ZNF99A8MXY4 864 aaPredicted RBP13.37□□□□□ -0.27
SEC23A-201ENST00000307712 GPR182O15218 404 aa13.37□□□□□ -0.27
SEC23A-201ENST00000307712 SLC7A4O43246 635 aa13.37□□□□□ -0.27
SEC23A-201ENST00000307712 TULP3O75386 442 aa13.37□□□□□ -0.27
SEC23A-201ENST00000307712 DARSP14868 501 aaKnown RBP13.37□□□□□ -0.27
SEC23A-201ENST00000307712 ARSFP54793 590 aa13.37□□□□□ -0.27
SEC23A-201ENST00000307712 CPSF6Q16630 551 aaKnown RBP eCLIP13.37□□□□□ -0.27
SEC23A-201ENST00000307712 TMEM53Q6P2H8 277 aa13.37□□□□□ -0.27
SEC23A-201ENST00000307712 MOB2Q70IA6 237 aa13.37□□□□□ -0.27
SEC23A-201ENST00000307712 OR10Q1Q8NGQ4 319 aa13.37□□□□□ -0.27
SEC23A-201ENST00000307712 NSUN5Q96P11 429 aaKnown RBP13.37□□□□□ -0.27
SEC23A-201ENST00000307712 ZYG11BQ9C0D3 744 aa13.37□□□□□ -0.27
SEC23A-201ENST00000307712 RPF2Q9H7B2 306 aaKnown RBP13.37□□□□□ -0.27
SEC23A-201ENST00000307712 A0A1W2PP18 115 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 ABCB7O75027 752 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 CAPN1P07384 714 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 ACADVLP49748 655 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 DNAJB13P59910 316 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 TECRLQ5HYJ1 363 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 GNASQ5JWF2 1037 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 PAQR3Q6TCH7 311 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 OSTM1Q86WC4 334 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 SLC44A2Q8IWA5 706 aaPredicted RBP13.36□□□□□ -0.27
SEC23A-201ENST00000307712 TRPM4Q8TD43 1214 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 UBASH3BQ8TF42 649 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 PPP3R2Q96LZ3 170 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 HERC2P3Q9BVR0 1158 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 TOR3AQ9H497 397 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 AMBNQ9NP70 447 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 POLE4Q9NR33 117 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 GALPQ9UBC7 116 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 PTCH2Q9Y6C5 1203 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.36□□□□□ -0.27
SEC23A-201ENST00000307712 TFECO14948 347 aaPredicted RBP13.36□□□□□ -0.27
SEC23A-201ENST00000307712 DCLK1O15075 740 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 RGS10O43665 173 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 BEST1O76090 585 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 PRKCGP05129 697 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 HLA-DPA1P20036 260 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 MYF6P23409 242 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 DPP6P42658 865 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 EEFSECP57772 596 aaKnown RBP13.36□□□□□ -0.27
SEC23A-201ENST00000307712 ZNF177Q13360 481 aaPredicted RBP13.36□□□□□ -0.27
SEC23A-201ENST00000307712 CRY1Q16526 586 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 FAM187BQ17R55 369 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 SYT16Q17RD7 645 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 MFSD4BQ5TF39 518 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 ZCCHC8Q6NZY4 707 aaKnown RBP13.36□□□□□ -0.27
SEC23A-201ENST00000307712 TSSK3Q96PN8 268 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 SMCHD1A6NHR9 2005 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 CROCCQ5TZA2 2017 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 C8BP07358 591 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 ABCB1P08183 1280 aaPredicted RBP13.36□□□□□ -0.27
SEC23A-201ENST00000307712 PWP1Q13610 501 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 SLC39A12Q504Y0 691 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 HID1Q8IV36 788 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 LGI2Q8N0V4 545 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 C12orf42Q96LP6 360 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 KRT84Q9NSB2 600 aa13.36□□□□□ -0.27
SEC23A-201ENST00000307712 TNPO3Q9Y5L0 923 aaKnown RBP13.36□□□□□ -0.27
SEC23A-201ENST00000307712 PSMD11O00231 422 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 XYLBO75191 536 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 RASAL1O95294 804 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 PGLSO95336 258 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 SMIM10L2AP0DMW4 78 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 SMIM10L2BP0DMW5 78 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 UROSP10746 265 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 KCNA5P22460 613 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 HLCSP50747 726 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 PTPRCAPQ14761 206 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 SKIV2LQ15477 1246 aaKnown RBP13.35□□□□□ -0.27
SEC23A-201ENST00000307712 TTLL9Q3SXZ7 439 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 ZNF678Q5SXM1 525 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 DLK2Q6UY11 383 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 DCDC5Q6ZRR9 648 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 ZNF605Q86T29 641 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 SLC22A16Q86VW1 577 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 GATAD2AQ86YP4 633 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 LRRC49Q8IUZ0 686 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 OR13C4Q8NGS5 318 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 SCAMP5Q8TAC9 235 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 E9PAM4 449 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 ENPP3O14638 875 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 ACOT8O14734 319 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 CDH1P12830 882 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 CD68P34810 354 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms