RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 PRDM8Q9NQV8 689 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 HMGXB4Q9UGU5 601 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 CDH22Q9UJ99 828 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 FCF1Q9Y324 198 aaKnown RBP15.84■□□□□ 0.13
USP42-201ENST00000306177 CCL22O00626 93 aa15.83■□□□□ 0.13
USP42-201ENST00000306177 ATXN1P54253 815 aaKnown RBP15.83■□□□□ 0.13
USP42-201ENST00000306177 ERICH5Q6P6B1 374 aa15.83■□□□□ 0.13
USP42-201ENST00000306177 IFNL1Q8IU54 200 aa15.83■□□□□ 0.13
USP42-201ENST00000306177 CROCCP3Q8IVE0 287 aa15.83■□□□□ 0.13
USP42-201ENST00000306177 ADCY4Q8NFM4 1077 aa15.83■□□□□ 0.13
USP42-201ENST00000306177 CLIC5Q9NZA1 410 aa15.83■□□□□ 0.13
USP42-201ENST00000306177 ZNF624Q9P2J8 865 aaPredicted RBP15.83■□□□□ 0.13
USP42-201ENST00000306177 IL6P05231 212 aa15.83■□□□□ 0.13
USP42-201ENST00000306177 UROSP10746 265 aa15.83■□□□□ 0.13
USP42-201ENST00000306177 PRG2P13727 222 aa15.83■□□□□ 0.13
USP42-201ENST00000306177 RPL4P36578 427 aaKnown RBP15.83■□□□□ 0.13
USP42-201ENST00000306177 PSMD8P48556 350 aa15.83■□□□□ 0.13
USP42-201ENST00000306177 NRG1Q02297 640 aaPredicted RBP15.83■□□□□ 0.13
USP42-201ENST00000306177 HPS6Q86YV9 775 aa15.83■□□□□ 0.13
USP42-201ENST00000306177 ARL14EPQ8N8R7 260 aaPredicted RBP15.83■□□□□ 0.13
USP42-201ENST00000306177 HAPLN3Q96S86 360 aa15.83■□□□□ 0.13
USP42-201ENST00000306177 GMLQ99445 158 aa15.83■□□□□ 0.13
USP42-201ENST00000306177 C8orf4Q9NR00 106 aa15.83■□□□□ 0.13
USP42-201ENST00000306177 ACSS2Q9NR19 701 aa15.83■□□□□ 0.13
USP42-201ENST00000306177 SESN1Q9Y6P5 492 aa15.83■□□□□ 0.13
USP42-201ENST00000306177 FOXO6A8MYZ6 492 aa15.83■□□□□ 0.12
USP42-201ENST00000306177 GSTT1P30711 240 aa15.83■□□□□ 0.12
USP42-201ENST00000306177 RABGGTBP53611 331 aa15.83■□□□□ 0.12
USP42-201ENST00000306177 HIPK1Q86Z02 1210 aa15.83■□□□□ 0.12
USP42-201ENST00000306177 PGAM4Q8N0Y7 254 aa15.83■□□□□ 0.12
USP42-201ENST00000306177 ST13P5Q8NFI4 369 aaPredicted RBP15.83■□□□□ 0.12
USP42-201ENST00000306177 KBTBD8Q8NFY9 601 aa15.83■□□□□ 0.12
USP42-201ENST00000306177 TEX47Q8TBZ9 253 aa15.83■□□□□ 0.12
USP42-201ENST00000306177 FBXL18Q96ME1 805 aa15.83■□□□□ 0.12
USP42-201ENST00000306177 MINDY3Q9H8M7 445 aa15.83■□□□□ 0.12
USP42-201ENST00000306177 EPHX1P07099 455 aa15.83■□□□□ 0.12
USP42-201ENST00000306177 OGNP20774 298 aaKnown RBP15.83■□□□□ 0.12
USP42-201ENST00000306177 IDSP22304 550 aa15.83■□□□□ 0.12
USP42-201ENST00000306177 SCNN1AP37088 669 aa15.83■□□□□ 0.12
USP42-201ENST00000306177 PPIGQ13427 754 aaKnown RBP eCLIP15.83■□□□□ 0.12
USP42-201ENST00000306177 TAB1Q15750 504 aa15.83■□□□□ 0.12
USP42-201ENST00000306177 RFTN2Q52LD8 501 aaPredicted RBP15.83■□□□□ 0.12
USP42-201ENST00000306177 SH3PXD2AQ5TCZ1 1133 aa15.83■□□□□ 0.12
USP42-201ENST00000306177 GLYATQ6IB77 296 aa15.83■□□□□ 0.12
USP42-201ENST00000306177 CLEC20AQ6ZU45 233 aa15.83■□□□□ 0.12
USP42-201ENST00000306177 SERPINA9Q86WD7 417 aa15.83■□□□□ 0.12
USP42-201ENST00000306177 AGAP2Q99490 1192 aa15.83■□□□□ 0.12
USP42-201ENST00000306177 EPB41L1Q9H4G0 881 aa15.83■□□□□ 0.12
USP42-201ENST00000306177 EHD3Q9NZN3 535 aa15.83■□□□□ 0.12
USP42-201ENST00000306177 ZNF142P52746 1687 aaPredicted RBP15.83■□□□□ 0.12
USP42-201ENST00000306177 LTBP3Q9NS15 1303 aa15.83■□□□□ 0.12
USP42-201ENST00000306177 SHOX2O60902 331 aaPredicted RBP15.82■□□□□ 0.12
USP42-201ENST00000306177 TSC22D2O75157 780 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 ESR1P03372 595 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 PAX7P23759 505 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 PRDX6P30041 224 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 ATP12AP54707 1039 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 CCNYL2Q5T2Q4 361 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 CLEC6AQ6EIG7 209 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 RINLQ6ZS11 566 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 ZNF572Q7Z3I7 529 aaPredicted RBP15.82■□□□□ 0.12
USP42-201ENST00000306177 FITM2Q8N6M3 262 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 PPM1MQ96MI6 270 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 SLC28A3Q9HAS3 691 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 EXD2Q9NVH0 621 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 PCDHGA4Q9Y5G9 962 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 N6AMT1Q9Y5N5 214 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 TIPRLO75663 272 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 PTPN2P17706 415 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 TPP2P29144 1249 aaPredicted RBP15.82■□□□□ 0.12
USP42-201ENST00000306177 MSX2P35548 267 aaPredicted RBP15.82■□□□□ 0.12
USP42-201ENST00000306177 HSPA7P48741 367 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 NAE1Q13564 534 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 TOMM20Q15388 145 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 MTX3Q5HYI7 312 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 VWA5B1Q5TIE3 1220 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 KIAA0930Q6ICG6 404 aaPredicted RBP15.82■□□□□ 0.12
USP42-201ENST00000306177 PSRC1Q6PGN9 363 aaPredicted RBP15.82■□□□□ 0.12
USP42-201ENST00000306177 SMYD1Q8NB12 490 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 MCMBPQ9BTE3 642 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 INTS7Q9NVH2 962 aaKnown RBP15.82■□□□□ 0.12
USP42-201ENST00000306177 SLC45A1Q9Y2W3 748 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 PTGER3P43115 390 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 ACLYP53396 1101 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 PRMT2P55345 433 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 GTF2H2Q13888 395 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 TAF1AQ15573 450 aaPredicted RBP15.82■□□□□ 0.12
USP42-201ENST00000306177 IL23RQ5VWK5 629 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 GTF2H2CQ6P1K8 395 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 PRSS55Q6UWB4 352 aaPredicted RBP15.82■□□□□ 0.12
USP42-201ENST00000306177 OR2T34Q8NGX1 318 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 OR2T3Q8NH03 318 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 LPIN3Q9BQK8 851 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 LMAN2LQ9H0V9 348 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 CYP4F2P78329 520 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 SF1Q15637 639 aaKnown RBP15.82■□□□□ 0.12
USP42-201ENST00000306177 BANPQ8N9N5 519 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 S100A13Q99584 98 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 HEPHQ9BQS7 1158 aa15.82■□□□□ 0.12
USP42-201ENST00000306177 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms