RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 MARK2Q7KZI7 788 aaKnown RBP24.23■■□□□ 1.47
HOXC9-201ENST00000303450 SERPINA9Q86WD7 417 aa24.23■■□□□ 1.47
HOXC9-201ENST00000303450 PIANPQ8IYJ0 282 aa24.23■■□□□ 1.47
HOXC9-201ENST00000303450 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.23■■□□□ 1.47
HOXC9-201ENST00000303450 CFAP36Q96G28 342 aa24.23■■□□□ 1.47
HOXC9-201ENST00000303450 PDXPQ96GD0 296 aa24.23■■□□□ 1.47
HOXC9-201ENST00000303450 WDR83Q9BRX9 315 aaKnown RBP24.23■■□□□ 1.47
HOXC9-201ENST00000303450 SLC13A1Q9BZW2 595 aa24.23■■□□□ 1.47
HOXC9-201ENST00000303450 ZCCHC2Q9C0B9 1178 aaKnown RBP24.23■■□□□ 1.47
HOXC9-201ENST00000303450 PHACTR1Q9C0D0 580 aa24.23■■□□□ 1.47
HOXC9-201ENST00000303450 ATXN10Q9UBB4 475 aa24.23■■□□□ 1.47
HOXC9-201ENST00000303450 PNMA8BQ9ULN7 279 aaPredicted RBP24.23■■□□□ 1.47
HOXC9-201ENST00000303450 FAM169AQ9Y6X4 670 aa24.23■■□□□ 1.47
HOXC9-201ENST00000303450 CABIN1Q9Y6J0 2220 aa24.22■■□□□ 1.47
HOXC9-201ENST00000303450 TRBV5-4A0A0C4DH59 114 aa24.22■■□□□ 1.47
HOXC9-201ENST00000303450 ZCWPW2A0A1B0GU75 182 aa24.22■■□□□ 1.47
HOXC9-201ENST00000303450 H3BM21 787 aa24.22■■□□□ 1.47
HOXC9-201ENST00000303450 VEGFDO43915 354 aa24.22■■□□□ 1.47
HOXC9-201ENST00000303450 TNFP01375 233 aa24.22■■□□□ 1.47
HOXC9-201ENST00000303450 ARNTP27540 789 aa24.22■■□□□ 1.47
HOXC9-201ENST00000303450 RXRGP48443 463 aa24.22■■□□□ 1.47
HOXC9-201ENST00000303450 HK3P52790 923 aa24.22■■□□□ 1.47
HOXC9-201ENST00000303450 HNRNPKP61978 463 aaKnown RBP eCLIP24.22■■□□□ 1.47
HOXC9-201ENST00000303450 TMEM115Q12893 351 aaPredicted RBP24.22■■□□□ 1.47
HOXC9-201ENST00000303450 CRYMQ14894 314 aa24.22■■□□□ 1.47
HOXC9-201ENST00000303450 SPANXN3Q5MJ09 141 aa24.22■■□□□ 1.47
HOXC9-201ENST00000303450 ADGRG6Q86SQ4 1221 aa24.22■■□□□ 1.47
HOXC9-201ENST00000303450 PHACTR4Q8IZ21 702 aa24.22■■□□□ 1.47
HOXC9-201ENST00000303450 OTUD6BQ8N6M0 293 aa24.22■■□□□ 1.47
HOXC9-201ENST00000303450 PYROXD1Q8WU10 500 aa24.22■■□□□ 1.47
HOXC9-201ENST00000303450 TTC1Q99614 292 aa24.22■■□□□ 1.47
HOXC9-201ENST00000303450 COPS8Q99627 209 aa24.22■■□□□ 1.47
HOXC9-201ENST00000303450 CARS2Q9HA77 564 aaKnown RBP24.22■■□□□ 1.47
HOXC9-201ENST00000303450 RXFP3Q9NSD7 469 aa24.22■■□□□ 1.47
HOXC9-201ENST00000303450 KLF15Q9UIH9 416 aa24.22■■□□□ 1.47
HOXC9-201ENST00000303450 DGKBQ9Y6T7 804 aa24.22■■□□□ 1.47
HOXC9-201ENST00000303450 BPTFQ12830 3046 aa24.22■■□□□ 1.47
HOXC9-201ENST00000303450 A0A1B0GTQ1 180 aa24.21■■□□□ 1.47
HOXC9-201ENST00000303450 GOLGA8KD6RF30 607 aa24.21■■□□□ 1.47
HOXC9-201ENST00000303450 GOLGA8TH3BQL2 631 aa24.21■■□□□ 1.47
HOXC9-201ENST00000303450 CD3EAPO15446 510 aaKnown RBP24.21■■□□□ 1.47
HOXC9-201ENST00000303450 CDK14O94921 469 aa24.21■■□□□ 1.47
HOXC9-201ENST00000303450 MSH3P20585 1137 aa24.21■■□□□ 1.47
HOXC9-201ENST00000303450 ACRV1P26436 265 aa24.21■■□□□ 1.47
HOXC9-201ENST00000303450 ARCN1P48444 511 aaKnown RBP24.21■■□□□ 1.47
HOXC9-201ENST00000303450 GTF2H3Q13889 308 aa24.21■■□□□ 1.47
HOXC9-201ENST00000303450 SMAD1Q15797 465 aaKnown RBP24.21■■□□□ 1.47
HOXC9-201ENST00000303450 LONRF1Q17RB8 773 aa24.21■■□□□ 1.47
HOXC9-201ENST00000303450 KHDC1Q4VXA5 237 aaKnown RBP24.21■■□□□ 1.47
HOXC9-201ENST00000303450 KCTD16Q68DU8 428 aa24.21■■□□□ 1.47
HOXC9-201ENST00000303450 FAM122AQ96E09 287 aa24.21■■□□□ 1.47
HOXC9-201ENST00000303450 DCUN1D1Q96GG9 259 aa24.21■■□□□ 1.47
HOXC9-201ENST00000303450 FMO2Q99518 471 aa24.21■■□□□ 1.47
HOXC9-201ENST00000303450 TSPYL1Q9H0U9 437 aa24.21■■□□□ 1.47
HOXC9-201ENST00000303450 TMEM9BQ9NQ34 198 aa24.21■■□□□ 1.47
HOXC9-201ENST00000303450 C20orf96Q9NUD7 363 aaPredicted RBP24.21■■□□□ 1.47
HOXC9-201ENST00000303450 ZDHHC3Q9NYG2 299 aa24.21■■□□□ 1.47
HOXC9-201ENST00000303450 APOBEC3BQ9UH17 382 aaKnown RBP24.21■■□□□ 1.47
HOXC9-201ENST00000303450 SUFUQ9UMX1 484 aa24.21■■□□□ 1.47
HOXC9-201ENST00000303450 GPR89AB7ZAQ6 455 aa24.2■■□□□ 1.47
HOXC9-201ENST00000303450 YKT6O15498 198 aa24.2■■□□□ 1.47
HOXC9-201ENST00000303450 IVLP07476 585 aa24.2■■□□□ 1.47
HOXC9-201ENST00000303450 GPR89BP0CG08 455 aa24.2■■□□□ 1.47
HOXC9-201ENST00000303450 RALBP11234 206 aa24.2■■□□□ 1.47
HOXC9-201ENST00000303450 ZNF8P17098 575 aaPredicted RBP24.2■■□□□ 1.47
HOXC9-201ENST00000303450 PPARGP37231 505 aaPredicted RBP24.2■■□□□ 1.47
HOXC9-201ENST00000303450 GNPDA1P46926 289 aa24.2■■□□□ 1.47
HOXC9-201ENST00000303450 CCT8P50990 548 aa24.2■■□□□ 1.47
HOXC9-201ENST00000303450 IL9RQ01113 521 aa24.2■■□□□ 1.47
HOXC9-201ENST00000303450 THOC5Q13769 683 aaKnown RBP24.2■■□□□ 1.47
HOXC9-201ENST00000303450 AARS2Q5JTZ9 985 aaKnown RBP24.2■■□□□ 1.47
HOXC9-201ENST00000303450 LYPLAL1Q5VWZ2 237 aa24.2■■□□□ 1.47
HOXC9-201ENST00000303450 CERS6Q6ZMG9 384 aa24.2■■□□□ 1.47
HOXC9-201ENST00000303450 UNC5AQ6ZN44 842 aa24.2■■□□□ 1.47
HOXC9-201ENST00000303450 CEP128Q6ZU80 1094 aa24.2■■□□□ 1.47
HOXC9-201ENST00000303450 RBFAQ8N0V3 343 aa24.2■■□□□ 1.47
HOXC9-201ENST00000303450 HEXDCQ8WVB3 486 aa24.2■■□□□ 1.47
HOXC9-201ENST00000303450 SCARF2Q96GP6 870 aaPredicted RBP24.2■■□□□ 1.47
HOXC9-201ENST00000303450 RMI1Q9H9A7 625 aa24.2■■□□□ 1.47
HOXC9-201ENST00000303450 IL1RAPL1Q9NZN1 696 aa24.2■■□□□ 1.47
HOXC9-201ENST00000303450 ZNHIT2Q9UHR6 403 aa24.2■■□□□ 1.47
HOXC9-201ENST00000303450 PTPRZ1P23471 2315 aaPredicted RBP24.2■■□□□ 1.46
HOXC9-201ENST00000303450 CFAP99D6REC4 459 aa24.2■■□□□ 1.46
HOXC9-201ENST00000303450 NUAK1O60285 661 aa24.2■■□□□ 1.46
HOXC9-201ENST00000303450 FUCA1P04066 466 aa24.2■■□□□ 1.46
HOXC9-201ENST00000303450 CTSEP14091 401 aa24.2■■□□□ 1.46
HOXC9-201ENST00000303450 DBN1Q16643 649 aa24.2■■□□□ 1.46
HOXC9-201ENST00000303450 MRNIPQ6NTE8 343 aa24.2■■□□□ 1.46
HOXC9-201ENST00000303450 NEPROQ6NW34 567 aa24.2■■□□□ 1.46
HOXC9-201ENST00000303450 GALNT13Q8IUC8 556 aa24.2■■□□□ 1.46
HOXC9-201ENST00000303450 PALM2Q8IXS6 379 aa24.2■■□□□ 1.46
HOXC9-201ENST00000303450 TCEAL2Q9H3H9 227 aaPredicted RBP24.2■■□□□ 1.46
HOXC9-201ENST00000303450 MARCH4Q9P2E8 410 aaPredicted RBP24.2■■□□□ 1.46
HOXC9-201ENST00000303450 NFU1Q9UMS0 254 aa24.2■■□□□ 1.46
HOXC9-201ENST00000303450 LRP4O75096 1905 aa24.19■■□□□ 1.46
HOXC9-201ENST00000303450 CDX4O14627 284 aaPredicted RBP24.19■■□□□ 1.46
HOXC9-201ENST00000303450 SCAMP1O15126 338 aa24.19■■□□□ 1.46
HOXC9-201ENST00000303450 SDC3O75056 442 aa24.19■■□□□ 1.46
HOXC9-201ENST00000303450 DNAJC6O75061 913 aa24.19■■□□□ 1.46
HOXC9-201ENST00000303450 PMLP29590 882 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms