RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 PRMT6Q96LA8 375 aaPredicted RBP14.33□□□□□ -0.12
CDT1-201ENST00000301019 NSUN5Q96P11 429 aaKnown RBP14.33□□□□□ -0.12
CDT1-201ENST00000301019 AGAP4Q96P64 663 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 CSPG4P5Q96PW8 444 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 BDH2Q9BUT1 245 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 ALG9Q9H6U8 611 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 FAM118AQ9NWS6 357 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 RWDD3Q9Y3V2 267 aa14.33□□□□□ -0.12
CDT1-201ENST00000301019 G3V2T6 193 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 ANGPTL1O95841 491 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 MT-ND2P03891 347 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 ITGB3P05106 788 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 FHP07954 510 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 MSH3P20585 1137 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 RAPSNQ13702 412 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 FRG1Q14331 258 aaKnown RBP14.32□□□□□ -0.12
CDT1-201ENST00000301019 TPRG1LQ5T0D9 272 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 SULT1C3Q6IMI6 304 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 ENPP6Q6UWR7 440 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 AMIGO1Q86WK6 493 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 LRRC71Q8N4P6 559 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 OR52K2Q8NGK3 314 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 EHD3Q9NZN3 535 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 FAM198AQ9UFP1 575 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 TSPAN16Q9UKR8 245 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 KLHL20Q9Y2M5 609 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 NUP205Q92621 2012 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 E5RI56 91 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 CXCL8P10145 99 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 TPSB2P20231 275 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 RAB25P57735 213 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 PPIL2Q13356 520 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 TPSAB1Q15661 275 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 DUOXA2Q1HG44 320 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 ZNF667Q5HYK9 610 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 NOMO2Q5JPE7 1267 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 TWF2Q6IBS0 349 aaKnown RBP14.32□□□□□ -0.12
CDT1-201ENST00000301019 PELI3Q8N2H9 469 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 ESX1Q8N693 406 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 C7orf57Q8NEG2 295 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 KCTD15Q96SI1 283 aaPredicted RBP14.32□□□□□ -0.12
CDT1-201ENST00000301019 COPS4Q9BT78 406 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 UCK2Q9BZX2 261 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 SLIRPQ9GZT3 109 aaKnown RBP14.32□□□□□ -0.12
CDT1-201ENST00000301019 CLPBQ9H078 707 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 CDHR5Q9HBB8 845 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 CPNE5Q9HCH3 593 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 ZCWPW2A0A1B0GU75 182 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 TNFRSF21O75509 655 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 DAG1Q14118 895 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 ZMAT1Q5H9K5 638 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 ZNF648Q5T619 568 aaPredicted RBP14.32□□□□□ -0.12
CDT1-201ENST00000301019 C4orf19Q8IY42 314 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 IL17RDQ8NFM7 739 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 SPATA22Q8NHS9 363 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 MUL1Q969V5 352 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 CHCHD6Q9BRQ6 235 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 NTN4Q9HB63 628 aa14.32□□□□□ -0.12
CDT1-201ENST00000301019 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.32□□□□□ -0.12
CDT1-201ENST00000301019 XIRP2A4UGR9 3374 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 FAM95CA0A1B0GW59 222 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 CIB4A0PJX0 185 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 TRIM64BA6NI03 449 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 TBKBP1A7MCY6 615 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 FXYD1O00168 92 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 CTDSP2O14595 271 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 PRMT5O14744 637 aaPredicted RBP14.31□□□□□ -0.12
CDT1-201ENST00000301019 CST1P01037 141 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 MPOP05164 745 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 ENPP1P22413 925 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 EMC2Q15006 297 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 ARHGEF16Q5VV41 709 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 LAIR2Q6ISS4 152 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 NLRP8Q86W28 1048 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 DYNC2LI1Q8TCX1 351 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 SH3RF2Q8TEC5 729 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 STON2Q8WXE9 905 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 CELF6Q96J87 481 aaKnown RBP14.31□□□□□ -0.12
CDT1-201ENST00000301019 BTBD3Q9Y2F9 522 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 FER1L6Q2WGJ9 1857 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 A0A1B0GTL3 188 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 MYO1GB0I1T2 1018 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 PIP5K1BO14986 540 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 CHRM5P08912 532 aaPredicted RBP14.31□□□□□ -0.12
CDT1-201ENST00000301019 STMN1P16949 149 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 S100A5P33763 92 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 SELPLGQ14242 412 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 TAF12Q16514 161 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 NFE2Q16621 373 aaPredicted RBP14.31□□□□□ -0.12
CDT1-201ENST00000301019 SYPL2Q5VXT5 272 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 NCBP2-AS2Q69YL0 99 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 TFAP2DQ7Z6R9 452 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 CLEC14AQ86T13 490 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 ACOT1Q86TX2 421 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 PACRGLQ8N7B6 248 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 STYXQ8WUJ0 223 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 NSMCE2Q96MF7 247 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 PHOX2BQ99453 314 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 TAS2R9Q9NYW1 312 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 ACTR3BQ9P1U1 418 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms