RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 SYT12Q8IV01 421 aa13.21□□□□□ -0.3
CASC4-201ENST00000299957 PHACTR4Q8IZ21 702 aa13.21□□□□□ -0.3
CASC4-201ENST00000299957 STX19Q8N4C7 294 aa13.21□□□□□ -0.3
CASC4-201ENST00000299957 REXO5Q96IC2 774 aaKnown RBP13.21□□□□□ -0.3
CASC4-201ENST00000299957 FCRL5Q96RD9 977 aa13.21□□□□□ -0.3
CASC4-201ENST00000299957 UGT2B28Q9BY64 529 aa13.21□□□□□ -0.3
CASC4-201ENST00000299957 SAMHD1Q9Y3Z3 626 aaKnown RBP13.21□□□□□ -0.3
CASC4-201ENST00000299957 RAI2Q9Y5P3 530 aa13.21□□□□□ -0.3
CASC4-201ENST00000299957 GMPPBQ9Y5P6 360 aa13.21□□□□□ -0.3
CASC4-201ENST00000299957 SLC25A14O95258 325 aaPredicted RBP13.2□□□□□ -0.3
CASC4-201ENST00000299957 ALPIP09923 528 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 GKP32189 559 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 CDKN2DP55273 166 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 GALNT2Q10471 571 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 ABRQ12979 859 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 SYT16Q17RD7 645 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 LILRA2Q8N149 483 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 KDM1BQ8NB78 822 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 BRI3BPQ8WY22 251 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 HPS1Q92902 700 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 DNAJB4Q9UDY4 337 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 TMCO1Q9UM00 188 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 TMA7Q9Y2S6 64 aaKnown RBP13.2□□□□□ -0.3
CASC4-201ENST00000299957 FZD9O00144 591 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 KPNA5O15131 536 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 SNAP91O60641 907 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 RPP40O75818 363 aaKnown RBP13.2□□□□□ -0.3
CASC4-201ENST00000299957 C1RP00736 705 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 ITGB1P05556 798 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 PABPC4LP0CB38 370 aaKnown RBP13.2□□□□□ -0.3
CASC4-201ENST00000299957 FMO3P31513 532 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 SMAD3P84022 425 aaKnown RBP13.2□□□□□ -0.3
CASC4-201ENST00000299957 ZNF423Q2M1K9 1284 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 AARS2Q5JTZ9 985 aaKnown RBP13.2□□□□□ -0.3
CASC4-201ENST00000299957 TAPT1Q6NXT6 567 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 TMEM169Q96HH4 297 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 PANX1Q96RD7 426 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 RRAGCQ9HB90 399 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 ITM2CQ9NQX7 267 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 INTS7Q9NVH2 962 aaKnown RBP13.2□□□□□ -0.3
CASC4-201ENST00000299957 AASSQ9UDR5 926 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 VPS9D1Q9Y2B5 631 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 DERAQ9Y315 318 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 SCN9AQ15858 1988 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.2□□□□□ -0.3
CASC4-201ENST00000299957 PIRO00625 290 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 KPNA6O60684 536 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 TBL1XO60907 577 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 ECI2O75521 394 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 WARSP23381 471 aaKnown RBP13.2□□□□□ -0.3
CASC4-201ENST00000299957 PRDX6P30041 224 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 CRATP43155 626 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 IRF8Q02556 426 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 PTPRRQ15256 657 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 KIAA0930Q6ICG6 404 aaPredicted RBP13.2□□□□□ -0.3
CASC4-201ENST00000299957 PRSS55Q6UWB4 352 aaPredicted RBP13.2□□□□□ -0.3
CASC4-201ENST00000299957 RRM2BQ7LG56 351 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 NKAPQ8N5F7 415 aaKnown RBP13.2□□□□□ -0.3
CASC4-201ENST00000299957 POC5Q8NA72 575 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 TSEN34Q9BSV6 310 aaKnown RBP13.2□□□□□ -0.3
CASC4-201ENST00000299957 MARCH7Q9H992 704 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 TMLHEQ9NVH6 421 aa13.2□□□□□ -0.3
CASC4-201ENST00000299957 DNAAF2Q9NVR5 837 aaKnown RBP13.2□□□□□ -0.3
CASC4-201ENST00000299957 ZNF490Q9ULM2 529 aaPredicted RBP13.2□□□□□ -0.3
CASC4-201ENST00000299957 CYP7B1O75881 506 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 SEC24AO95486 1093 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 GSTM1P09488 218 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 COX7A2P14406 83 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 EPB42P16452 691 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 NNMTP40261 264 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 HNRNPDQ14103 355 aaKnown RBP13.19□□□□□ -0.3
CASC4-201ENST00000299957 TRIP4Q15650 581 aaPredicted RBP13.19□□□□□ -0.3
CASC4-201ENST00000299957 AHSA2Q719I0 299 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 AHI1Q8N157 1196 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 UBE2J2Q8N2K1 259 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 NUDT8Q8WV74 236 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 EEF1AKMT1Q8WVE0 214 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 CAPSLQ8WWF8 208 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 HOPXQ9BPY8 73 aaPredicted RBP13.19□□□□□ -0.3
CASC4-201ENST00000299957 IFT80Q9P2H3 777 aaPredicted RBP13.19□□□□□ -0.3
CASC4-201ENST00000299957 OGDHLQ9ULD0 1010 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 RP1L1Q8IWN7 2480 aaPredicted RBP13.19□□□□□ -0.3
CASC4-201ENST00000299957 TFECO14948 347 aaPredicted RBP13.19□□□□□ -0.3
CASC4-201ENST00000299957 GABBR2O75899 941 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 TYMPP19971 482 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 IMPDH1P20839 514 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 BCL2L1Q07817 233 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 DPYSQ14117 519 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 PTGR1Q14914 329 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 FGD3Q5JSP0 725 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 BRMS1LQ5PSV4 323 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 TTC9BQ8N6N2 239 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 PSD4Q8NDX1 1056 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 SEPT8Q92599 483 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 CDKN2AIPNLQ96HQ2 116 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 SLC9A7Q96T83 725 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 FAM126AQ9BYI3 521 aaPredicted RBP13.19□□□□□ -0.3
CASC4-201ENST00000299957 USP22Q9UPT9 525 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 ZFP37Q9Y6Q3 630 aaPredicted RBP13.19□□□□□ -0.3
CASC4-201ENST00000299957 CACNA1CQ13936 2221 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms