RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 PTGER3P43115 390 aa13.5□□□□□ -0.25
CDH8-201ENST00000299345 ATN1P54259 1190 aaPredicted RBP13.5□□□□□ -0.25
CDH8-201ENST00000299345 BNIP2Q12982 314 aa13.5□□□□□ -0.25
CDH8-201ENST00000299345 ATXN7L2Q5T6C5 722 aaPredicted RBP13.5□□□□□ -0.25
CDH8-201ENST00000299345 MYO1HQ8N1T3 1032 aa13.5□□□□□ -0.25
CDH8-201ENST00000299345 ZFRQ96KR1 1074 aaKnown RBP13.5□□□□□ -0.25
CDH8-201ENST00000299345 HAUS8Q9BT25 410 aa13.5□□□□□ -0.25
CDH8-201ENST00000299345 APOL5Q9BWW9 433 aa13.5□□□□□ -0.25
CDH8-201ENST00000299345 OSBPL11Q9BXB4 747 aa13.5□□□□□ -0.25
CDH8-201ENST00000299345 IQCF5A8MTL0 148 aa13.49□□□□□ -0.25
CDH8-201ENST00000299345 VNN2O95498 520 aa13.49□□□□□ -0.25
CDH8-201ENST00000299345 GUCA1CO95843 209 aa13.49□□□□□ -0.25
CDH8-201ENST00000299345 CKMT2P17540 419 aa13.49□□□□□ -0.25
CDH8-201ENST00000299345 FASP25445 335 aa13.49□□□□□ -0.25
CDH8-201ENST00000299345 TRAF2Q12933 501 aa13.49□□□□□ -0.25
CDH8-201ENST00000299345 TIGD2Q4W5G0 525 aa13.49□□□□□ -0.25
CDH8-201ENST00000299345 LRRC58Q96CX6 371 aa13.49□□□□□ -0.25
CDH8-201ENST00000299345 CCT7Q99832 543 aa13.49□□□□□ -0.25
CDH8-201ENST00000299345 KCTD14Q9BQ13 255 aaPredicted RBP13.49□□□□□ -0.25
CDH8-201ENST00000299345 NUSAP1Q9BXS6 441 aaKnown RBP13.49□□□□□ -0.25
CDH8-201ENST00000299345 PIF1Q9H611 641 aa13.49□□□□□ -0.25
CDH8-201ENST00000299345 CNOT6Q9ULM6 557 aaKnown RBP13.49□□□□□ -0.25
CDH8-201ENST00000299345 TRPM7Q96QT4 1865 aa13.49□□□□□ -0.25
CDH8-201ENST00000299345 PABPN1LA6NDY0 278 aaKnown RBP13.49□□□□□ -0.25
CDH8-201ENST00000299345 STX16O14662 325 aa13.49□□□□□ -0.25
CDH8-201ENST00000299345 SGSHP51688 502 aa13.49□□□□□ -0.25
CDH8-201ENST00000299345 NR6A1Q15406 480 aa13.49□□□□□ -0.25
CDH8-201ENST00000299345 CYP51A1Q16850 503 aa13.49□□□□□ -0.25
CDH8-201ENST00000299345 PABPC1LQ4VXU2 614 aaKnown RBP13.49□□□□□ -0.25
CDH8-201ENST00000299345 ALG1LQ6GMV1 187 aa13.49□□□□□ -0.25
CDH8-201ENST00000299345 RETSATQ6NUM9 610 aa13.49□□□□□ -0.25
CDH8-201ENST00000299345 TMEM102Q8N9M5 508 aaPredicted RBP13.49□□□□□ -0.25
CDH8-201ENST00000299345 DDI1Q8WTU0 396 aa13.49□□□□□ -0.25
CDH8-201ENST00000299345 SDR39U1Q9NRG7 319 aaPredicted RBP13.49□□□□□ -0.25
CDH8-201ENST00000299345 MTRRQ9UBK8 725 aa13.49□□□□□ -0.25
CDH8-201ENST00000299345 SARDHQ9UL12 918 aa13.49□□□□□ -0.25
CDH8-201ENST00000299345 OAS3Q9Y6K5 1087 aaKnown RBP13.49□□□□□ -0.25
CDH8-201ENST00000299345 PRLP01236 227 aa13.49□□□□□ -0.25
CDH8-201ENST00000299345 PTPRRQ15256 657 aa13.49□□□□□ -0.25
CDH8-201ENST00000299345 IL27RAQ6UWB1 636 aa13.49□□□□□ -0.25
CDH8-201ENST00000299345 FAM151BQ6UXP7 276 aa13.49□□□□□ -0.25
CDH8-201ENST00000299345 SYVN1Q86TM6 617 aa13.49□□□□□ -0.25
CDH8-201ENST00000299345 AHI1Q8N157 1196 aa13.49□□□□□ -0.25
CDH8-201ENST00000299345 OVCA2Q8WZ82 227 aa13.49□□□□□ -0.25
CDH8-201ENST00000299345 LATS2Q9NRM7 1088 aa13.49□□□□□ -0.25
CDH8-201ENST00000299345 UBAP1Q9NZ09 502 aa13.49□□□□□ -0.25
CDH8-201ENST00000299345 CRLS1Q9UJA2 301 aa13.49□□□□□ -0.25
CDH8-201ENST00000299345 LEF1Q9UJU2 399 aaPredicted RBP13.49□□□□□ -0.25
CDH8-201ENST00000299345 TMCO1Q9UM00 188 aa13.49□□□□□ -0.25
CDH8-201ENST00000299345 V9GYQ6 96 aa13.49□□□□□ -0.25
CDH8-201ENST00000299345 NYNRINQ9P2P1 1898 aaKnown RBP13.49□□□□□ -0.25
CDH8-201ENST00000299345 CEP350Q5VT06 3117 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 MYO16Q9Y6X6 1858 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 C2orf78A6NCI8 922 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 ITGALP20701 1170 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 MZF1P28698 734 aaPredicted RBP13.48□□□□□ -0.25
CDH8-201ENST00000299345 PRDX3P30048 256 aaKnown RBP13.48□□□□□ -0.25
CDH8-201ENST00000299345 CDKL1Q00532 357 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 TIAL1Q01085 375 aaKnown RBP eCLIP13.48□□□□□ -0.25
CDH8-201ENST00000299345 CAP1Q01518 475 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 DYNC1I2Q13409 638 aaKnown RBP13.48□□□□□ -0.25
CDH8-201ENST00000299345 IKBKEQ14164 716 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 AASDHQ4L235 1098 aaPredicted RBP13.48□□□□□ -0.25
CDH8-201ENST00000299345 SLC8B1Q6J4K2 584 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 CYHR1Q6ZMK1 362 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 ADAMTSL2Q86TH1 951 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 SLC15A3Q8IY34 581 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 ZNF461Q8TAF7 563 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 NAT14Q8WUY8 206 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 KCNJ9Q92806 393 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 CDK15Q96Q40 435 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 HBEGFQ99075 208 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 MRPS26Q9BYN8 205 aaKnown RBP13.48□□□□□ -0.25
CDH8-201ENST00000299345 TUBB1Q9H4B7 451 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 ASB8Q9H765 288 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 GMPR2Q9P2T1 348 aaKnown RBP13.48□□□□□ -0.25
CDH8-201ENST00000299345 TNPO3Q9Y5L0 923 aaKnown RBP13.48□□□□□ -0.25
CDH8-201ENST00000299345 NME4O00746 187 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 RAD51BO15315 384 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 PABPC4LP0CB38 370 aaKnown RBP13.48□□□□□ -0.25
CDH8-201ENST00000299345 PSMD8P48556 350 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 PLIN5Q00G26 463 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 CACNG1Q06432 222 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 GRM2Q14416 872 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 SLC5A9Q2M3M2 681 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 KLHDC10Q6PID8 442 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 HJURPQ8NCD3 748 aaPredicted RBP13.48□□□□□ -0.25
CDH8-201ENST00000299345 ZBTB18Q99592 522 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 SLC30A3Q99726 388 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 ZBED2Q9BTP6 218 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 RNF38Q9H0F5 515 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 THEGQ9P2T0 379 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 CD300AQ9UGN4 299 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 LSM7Q9UK45 103 aaKnown RBP13.48□□□□□ -0.25
CDH8-201ENST00000299345 YIPF1Q9Y548 306 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 COMMD3-BMI1R4GMX3 469 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 ARHGAP10A1A4S6 786 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 HNRNPRO43390 633 aaKnown RBP13.48□□□□□ -0.25
CDH8-201ENST00000299345 RPS17P08708 135 aaKnown RBP13.48□□□□□ -0.25
CDH8-201ENST00000299345 NELFEP18615 380 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms