RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 HK3P52790 923 aa25.41■■□□□ 1.66
SDCCAG3-201ENST00000298537 ADARP55265 1226 aaKnown RBP25.41■■□□□ 1.66
SDCCAG3-201ENST00000298537 LSM12Q3MHD2 195 aaKnown RBP25.41■■□□□ 1.66
SDCCAG3-201ENST00000298537 MARK4Q96L34 752 aa25.41■■□□□ 1.66
SDCCAG3-201ENST00000298537 STN1Q9H668 368 aaKnown RBP25.41■■□□□ 1.66
SDCCAG3-201ENST00000298537 APPL1Q9UKG1 709 aa25.41■■□□□ 1.66
SDCCAG3-201ENST00000298537 PAPLNO95428 1278 aa25.4■■□□□ 1.66
SDCCAG3-201ENST00000298537 PTPN4P29074 926 aa25.4■■□□□ 1.66
SDCCAG3-201ENST00000298537 CLEC6AQ6EIG7 209 aa25.4■■□□□ 1.66
SDCCAG3-201ENST00000298537 PTRHD1Q6GMV3 140 aaKnown RBP25.4■■□□□ 1.66
SDCCAG3-201ENST00000298537 GRAMD4Q6IC98 578 aa25.4■■□□□ 1.66
SDCCAG3-201ENST00000298537 VITQ6UXI7 678 aa25.4■■□□□ 1.66
SDCCAG3-201ENST00000298537 GPR149Q86SP6 731 aa25.4■■□□□ 1.66
SDCCAG3-201ENST00000298537 ZNF557Q8N988 423 aaPredicted RBP25.4■■□□□ 1.66
SDCCAG3-201ENST00000298537 RHEBL1Q8TAI7 183 aa25.4■■□□□ 1.66
SDCCAG3-201ENST00000298537 SCAMP4Q969E2 229 aa25.4■■□□□ 1.66
SDCCAG3-201ENST00000298537 CLPBQ9H078 707 aa25.4■■□□□ 1.66
SDCCAG3-201ENST00000298537 TCF7L2Q9NQB0 619 aa25.4■■□□□ 1.66
SDCCAG3-201ENST00000298537 ELOVL2Q9NXB9 296 aa25.4■■□□□ 1.66
SDCCAG3-201ENST00000298537 UTP6Q9NYH9 597 aaKnown RBP25.4■■□□□ 1.66
SDCCAG3-201ENST00000298537 TAS2R1Q9NYW7 299 aa25.4■■□□□ 1.66
SDCCAG3-201ENST00000298537 MSRAQ9UJ68 235 aa25.4■■□□□ 1.66
SDCCAG3-201ENST00000298537 ASB1Q9Y576 335 aa25.4■■□□□ 1.66
SDCCAG3-201ENST00000298537 PRUNE2Q8WUY3 3088 aa25.4■■□□□ 1.66
SDCCAG3-201ENST00000298537 ZNF106Q9H2Y7 1883 aaKnown RBP25.4■■□□□ 1.66
SDCCAG3-201ENST00000298537 PFDN6O15212 129 aa25.4■■□□□ 1.66
SDCCAG3-201ENST00000298537 DCXO43602 365 aa25.4■■□□□ 1.66
SDCCAG3-201ENST00000298537 TRIM16O95361 564 aa25.4■■□□□ 1.66
SDCCAG3-201ENST00000298537 TIMP2P16035 220 aa25.4■■□□□ 1.66
SDCCAG3-201ENST00000298537 AGTR2P50052 363 aa25.4■■□□□ 1.66
SDCCAG3-201ENST00000298537 ASPHQ12797 758 aa25.4■■□□□ 1.66
SDCCAG3-201ENST00000298537 CERS6Q6ZMG9 384 aa25.4■■□□□ 1.66
SDCCAG3-201ENST00000298537 HSD11B1LQ7Z5J1 315 aa25.4■■□□□ 1.66
SDCCAG3-201ENST00000298537 LONP2Q86WA8 852 aa25.4■■□□□ 1.66
SDCCAG3-201ENST00000298537 SLC22A9Q8IVM8 553 aa25.4■■□□□ 1.66
SDCCAG3-201ENST00000298537 INPP5DQ92835 1189 aa25.4■■□□□ 1.66
SDCCAG3-201ENST00000298537 TBRG4Q969Z0 631 aaKnown RBP eCLIP25.4■■□□□ 1.661e-7■■■■■ 35.3
SDCCAG3-201ENST00000298537 CADM1Q9BY67 442 aaKnown RBP25.4■■□□□ 1.66
SDCCAG3-201ENST00000298537 PCDH12Q9NPG4 1184 aa25.4■■□□□ 1.66
SDCCAG3-201ENST00000298537 KLC4Q9NSK0 619 aa25.4■■□□□ 1.66
SDCCAG3-201ENST00000298537 MEI4A8MW99 385 aa25.39■■□□□ 1.66
SDCCAG3-201ENST00000298537 F8W8V4 182 aa25.39■■□□□ 1.66
SDCCAG3-201ENST00000298537 KERAO60938 352 aa25.39■■□□□ 1.66
SDCCAG3-201ENST00000298537 SMIM24O75264 130 aa25.39■■□□□ 1.66
SDCCAG3-201ENST00000298537 TPBGLP0DKB5 382 aa25.39■■□□□ 1.66
SDCCAG3-201ENST00000298537 GFAPP14136 432 aa25.39■■□□□ 1.66
SDCCAG3-201ENST00000298537 CALB2P22676 271 aa25.39■■□□□ 1.66
SDCCAG3-201ENST00000298537 NNMTP40261 264 aa25.39■■□□□ 1.66
SDCCAG3-201ENST00000298537 HERVK_113P63132 956 aa25.39■■□□□ 1.66
SDCCAG3-201ENST00000298537 B4GALNT1Q00973 533 aa25.39■■□□□ 1.66
SDCCAG3-201ENST00000298537 NXPE1Q8N323 547 aa25.39■■□□□ 1.66
SDCCAG3-201ENST00000298537 CBARPQ8N350 705 aaPredicted RBP25.39■■□□□ 1.66
SDCCAG3-201ENST00000298537 CCDC126Q96EE4 140 aa25.39■■□□□ 1.66
SDCCAG3-201ENST00000298537 L3HYPDHQ96EM0 354 aa25.39■■□□□ 1.66
SDCCAG3-201ENST00000298537 ERVK-6Q9BXR3 956 aa25.39■■□□□ 1.66
SDCCAG3-201ENST00000298537 IL36AQ9UHA7 158 aa25.39■■□□□ 1.66
SDCCAG3-201ENST00000298537 ITM2BQ9Y287 266 aa25.39■■□□□ 1.66
SDCCAG3-201ENST00000298537 ZNF7P17097 686 aaPredicted RBP25.38■■□□□ 1.65
SDCCAG3-201ENST00000298537 IL2P60568 153 aa25.38■■□□□ 1.65
SDCCAG3-201ENST00000298537 NFKB2Q00653 900 aa25.38■■□□□ 1.65
SDCCAG3-201ENST00000298537 STK40Q8N2I9 435 aa25.38■■□□□ 1.65
SDCCAG3-201ENST00000298537 STAG3L4Q8TBR4 150 aa25.38■■□□□ 1.65
SDCCAG3-201ENST00000298537 DOCK8Q8NF50 2099 aa25.38■■□□□ 1.65
SDCCAG3-201ENST00000298537 MTX2O75431 263 aa25.38■■□□□ 1.65
SDCCAG3-201ENST00000298537 SLC25A14O95258 325 aaPredicted RBP25.38■■□□□ 1.65
SDCCAG3-201ENST00000298537 SPINT3P49223 89 aa25.38■■□□□ 1.65
SDCCAG3-201ENST00000298537 RBFAQ8N0V3 343 aa25.38■■□□□ 1.65
SDCCAG3-201ENST00000298537 NKAPQ8N5F7 415 aaKnown RBP25.38■■□□□ 1.65
SDCCAG3-201ENST00000298537 PLK4O00444 970 aa25.37■■□□□ 1.65
SDCCAG3-201ENST00000298537 ATP5BP06576 529 aaKnown RBP25.37■■□□□ 1.65
SDCCAG3-201ENST00000298537 SH3BP2P78314 561 aa25.37■■□□□ 1.65
SDCCAG3-201ENST00000298537 SLC27A6Q9Y2P4 619 aa25.37■■□□□ 1.65
SDCCAG3-201ENST00000298537 DHRS7Q9Y394 339 aa25.37■■□□□ 1.65
SDCCAG3-201ENST00000298537 TCF20Q9UGU0 1960 aaKnown RBP25.37■■□□□ 1.65
SDCCAG3-201ENST00000298537 PIKFYVEQ9Y2I7 2098 aa25.37■■□□□ 1.65
SDCCAG3-201ENST00000298537 NFATC1O95644 943 aa25.37■■□□□ 1.65
SDCCAG3-201ENST00000298537 EEF1DP29692 281 aaKnown RBP25.37■■□□□ 1.65
SDCCAG3-201ENST00000298537 ETV3P41162 512 aa25.37■■□□□ 1.65
SDCCAG3-201ENST00000298537 C18orf21Q32NC0 220 aaPredicted RBP25.37■■□□□ 1.65
SDCCAG3-201ENST00000298537 Q6ZVL8 140 aa25.37■■□□□ 1.65
SDCCAG3-201ENST00000298537 MYADMQ96S97 322 aa25.37■■□□□ 1.65
SDCCAG3-201ENST00000298537 BTBD10Q9BSF8 475 aa25.37■■□□□ 1.65
SDCCAG3-201ENST00000298537 LMAN2LQ9H0V9 348 aa25.37■■□□□ 1.65
SDCCAG3-201ENST00000298537 PLXNB3Q9ULL4 1909 aa25.36■■□□□ 1.65
SDCCAG3-201ENST00000298537 COL4A3Q01955 1670 aa25.36■■□□□ 1.65
SDCCAG3-201ENST00000298537 AGAP14A8MT82 685 aa25.36■■□□□ 1.65
SDCCAG3-201ENST00000298537 B2RBV5 119 aa25.36■■□□□ 1.65
SDCCAG3-201ENST00000298537 MGRN1O60291 552 aa25.36■■□□□ 1.65
SDCCAG3-201ENST00000298537 FOXA1P55317 472 aa25.36■■□□□ 1.65
SDCCAG3-201ENST00000298537 ATP6V0D1P61421 351 aa25.36■■□□□ 1.65
SDCCAG3-201ENST00000298537 BTKQ06187 659 aa25.36■■□□□ 1.65
SDCCAG3-201ENST00000298537 DLX2Q07687 328 aaPredicted RBP25.36■■□□□ 1.65
SDCCAG3-201ENST00000298537 ILF2Q12905 390 aaKnown RBP25.36■■□□□ 1.65
SDCCAG3-201ENST00000298537 NXNQ6DKJ4 435 aa25.36■■□□□ 1.65
SDCCAG3-201ENST00000298537 PLPP6Q8IY26 295 aa25.36■■□□□ 1.65
SDCCAG3-201ENST00000298537 CHFRQ96EP1 664 aa25.36■■□□□ 1.65
SDCCAG3-201ENST00000298537 KXD1Q9BQD3 176 aa25.36■■□□□ 1.65
SDCCAG3-201ENST00000298537 RPP25Q9BUL9 199 aaKnown RBP25.36■■□□□ 1.65
SDCCAG3-201ENST00000298537 TAGLN3Q9UI15 199 aa25.36■■□□□ 1.65
SDCCAG3-201ENST00000298537 HNRNPH1P31943 449 aaKnown RBP25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms