RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 TRPV3Q8NET8 790 aa24.2■■□□□ 1.46
SPTSSA-201ENST00000298130 CCDC97Q96F63 343 aaPredicted RBP24.2■■□□□ 1.46
SPTSSA-201ENST00000298130 TRIM15Q9C019 465 aa24.2■■□□□ 1.46
SPTSSA-201ENST00000298130 Q9Y3F1 56 aa24.2■■□□□ 1.46
SPTSSA-201ENST00000298130 IGLV3-10A0A075B6K4 115 aa24.19■■□□□ 1.46
SPTSSA-201ENST00000298130 PRAMEF11O60813 436 aa24.19■■□□□ 1.46
SPTSSA-201ENST00000298130 KATNA1O75449 491 aa24.19■■□□□ 1.46
SPTSSA-201ENST00000298130 HLA-DPA1P20036 260 aa24.19■■□□□ 1.46
SPTSSA-201ENST00000298130 ACVR1Q04771 509 aa24.19■■□□□ 1.46
SPTSSA-201ENST00000298130 ATP6AP1Q15904 470 aa24.19■■□□□ 1.46
SPTSSA-201ENST00000298130 SLC36A3Q495N2 470 aa24.19■■□□□ 1.46
SPTSSA-201ENST00000298130 CTXN3Q4LDR2 81 aa24.19■■□□□ 1.46
SPTSSA-201ENST00000298130 NANOGP8Q6NSW7 305 aa24.19■■□□□ 1.46
SPTSSA-201ENST00000298130 GALNT7Q86SF2 657 aa24.19■■□□□ 1.46
SPTSSA-201ENST00000298130 LPCAT1Q8NF37 534 aa24.19■■□□□ 1.46
SPTSSA-201ENST00000298130 FEM1CQ96JP0 617 aa24.19■■□□□ 1.46
SPTSSA-201ENST00000298130 NANOGQ9H9S0 305 aa24.19■■□□□ 1.46
SPTSSA-201ENST00000298130 TYMPP19971 482 aa24.19■■□□□ 1.46
SPTSSA-201ENST00000298130 SLC6A4P31645 630 aa24.19■■□□□ 1.46
SPTSSA-201ENST00000298130 HTR6P50406 440 aa24.19■■□□□ 1.46
SPTSSA-201ENST00000298130 RAD51Q06609 339 aa24.19■■□□□ 1.46
SPTSSA-201ENST00000298130 MYBPC3Q14896 1274 aa24.19■■□□□ 1.46
SPTSSA-201ENST00000298130 CLLU1OSQ5K130 101 aa24.19■■□□□ 1.46
SPTSSA-201ENST00000298130 RHEBL1Q8TAI7 183 aa24.19■■□□□ 1.46
SPTSSA-201ENST00000298130 FBXO44Q9H4M3 255 aa24.19■■□□□ 1.46
SPTSSA-201ENST00000298130 FKBPLQ9UIM3 349 aa24.19■■□□□ 1.46
SPTSSA-201ENST00000298130 SLC22A3O75751 556 aa24.18■■□□□ 1.46
SPTSSA-201ENST00000298130 ATE1O95260 518 aa24.18■■□□□ 1.46
SPTSSA-201ENST00000298130 TFPTP0C1Z6 253 aa24.18■■□□□ 1.46
SPTSSA-201ENST00000298130 SUOXP51687 545 aa24.18■■□□□ 1.46
SPTSSA-201ENST00000298130 DGKQP52824 942 aa24.18■■□□□ 1.46
SPTSSA-201ENST00000298130 PPP1R8Q12972 351 aaKnown RBP24.18■■□□□ 1.46
SPTSSA-201ENST00000298130 ANKDD1AQ495B1 522 aa24.18■■□□□ 1.46
SPTSSA-201ENST00000298130 NAT16Q8N8M0 369 aa24.18■■□□□ 1.46
SPTSSA-201ENST00000298130 TIMMDC1Q9NPL8 285 aa24.18■■□□□ 1.46
SPTSSA-201ENST00000298130 CD274Q9NZQ7 290 aa24.18■■□□□ 1.46
SPTSSA-201ENST00000298130 TDRKHQ9Y2W6 561 aaKnown RBP24.18■■□□□ 1.46
SPTSSA-201ENST00000298130 SYNCRIPO60506 623 aaKnown RBP24.18■■□□□ 1.46
SPTSSA-201ENST00000298130 MYF6P23409 242 aa24.18■■□□□ 1.46
SPTSSA-201ENST00000298130 PIK3CGP48736 1102 aa24.18■■□□□ 1.46
SPTSSA-201ENST00000298130 TNK2Q07912 1038 aa24.18■■□□□ 1.46
SPTSSA-201ENST00000298130 FAM171A1Q5VUB5 890 aa24.18■■□□□ 1.46
SPTSSA-201ENST00000298130 KLHL35Q6PF15 583 aa24.18■■□□□ 1.46
SPTSSA-201ENST00000298130 HM13Q8TCT9 377 aa24.18■■□□□ 1.46
SPTSSA-201ENST00000298130 BIRC7Q96CA5 298 aa24.18■■□□□ 1.46
SPTSSA-201ENST00000298130 POLR1BQ9H9Y6 1135 aa24.18■■□□□ 1.46
SPTSSA-201ENST00000298130 ZFYVE28Q9HCC9 887 aa24.18■■□□□ 1.46
SPTSSA-201ENST00000298130 SQORQ9Y6N5 450 aa24.18■■□□□ 1.46
SPTSSA-201ENST00000298130 TRPM7Q96QT4 1865 aa24.17■■□□□ 1.46
SPTSSA-201ENST00000298130 A0A087WXM4 84 aa24.17■■□□□ 1.46
SPTSSA-201ENST00000298130 SNX2O60749 519 aa24.17■■□□□ 1.46
SPTSSA-201ENST00000298130 MATN4O95460 622 aa24.17■■□□□ 1.46
SPTSSA-201ENST00000298130 HRH2P25021 359 aa24.17■■□□□ 1.46
SPTSSA-201ENST00000298130 POLR2JP52435 117 aaKnown RBP24.17■■□□□ 1.46
SPTSSA-201ENST00000298130 HUNKP57058 714 aa24.17■■□□□ 1.46
SPTSSA-201ENST00000298130 BNIP2Q12982 314 aa24.17■■□□□ 1.46
SPTSSA-201ENST00000298130 TRIP4Q15650 581 aaPredicted RBP24.17■■□□□ 1.46
SPTSSA-201ENST00000298130 INTS11Q5TA45 600 aaKnown RBP24.17■■□□□ 1.46
SPTSSA-201ENST00000298130 TMEM26Q6ZUK4 368 aa24.17■■□□□ 1.46
SPTSSA-201ENST00000298130 MFSD2AQ8NA29 543 aa24.17■■□□□ 1.46
SPTSSA-201ENST00000298130 C9orf16Q9BUW7 83 aa24.17■■□□□ 1.46
SPTSSA-201ENST00000298130 PCTPQ9UKL6 214 aa24.17■■□□□ 1.46
SPTSSA-201ENST00000298130 TCRBV5S2A0A599 114 aa24.17■■□□□ 1.46
SPTSSA-201ENST00000298130 NT5C1B-RDH14C9J2C7 533 aa24.17■■□□□ 1.46
SPTSSA-201ENST00000298130 ITGB6P18564 788 aa24.17■■□□□ 1.46
SPTSSA-201ENST00000298130 TACR2P21452 398 aa24.17■■□□□ 1.46
SPTSSA-201ENST00000298130 ELK4P28324 431 aa24.17■■□□□ 1.46
SPTSSA-201ENST00000298130 GGT5P36269 586 aa24.17■■□□□ 1.46
SPTSSA-201ENST00000298130 KCNA10Q16322 511 aa24.17■■□□□ 1.46
SPTSSA-201ENST00000298130 ZRANB3Q5FWF4 1079 aa24.17■■□□□ 1.46
SPTSSA-201ENST00000298130 PRMT9Q6P2P2 845 aa24.17■■□□□ 1.46
SPTSSA-201ENST00000298130 RSPO2Q6UXX9 243 aaPredicted RBP24.17■■□□□ 1.46
SPTSSA-201ENST00000298130 GPR150Q8NGU9 434 aa24.17■■□□□ 1.46
SPTSSA-201ENST00000298130 LINGO1Q96FE5 620 aa24.17■■□□□ 1.46
SPTSSA-201ENST00000298130 ZNF599Q96NL3 588 aa24.17■■□□□ 1.46
SPTSSA-201ENST00000298130 BIRC8Q96P09 236 aa24.17■■□□□ 1.46
SPTSSA-201ENST00000298130 PLEKHG4BQ96PX9 1271 aa24.17■■□□□ 1.46
SPTSSA-201ENST00000298130 NPLQ9BXD5 320 aaPredicted RBP24.17■■□□□ 1.46
SPTSSA-201ENST00000298130 AIG1Q9NVV5 245 aa24.17■■□□□ 1.46
SPTSSA-201ENST00000298130 FAF1Q9UNN5 650 aaPredicted RBP24.17■■□□□ 1.46
SPTSSA-201ENST00000298130 PCDHB5Q9Y5E4 795 aa24.17■■□□□ 1.46
SPTSSA-201ENST00000298130 TANC1Q9C0D5 1861 aa24.16■■□□□ 1.46
SPTSSA-201ENST00000298130 BMP10O95393 424 aa24.16■■□□□ 1.46
SPTSSA-201ENST00000298130 NDST3O95803 873 aa24.16■■□□□ 1.46
SPTSSA-201ENST00000298130 RFC2P35250 354 aa24.16■■□□□ 1.46
SPTSSA-201ENST00000298130 ESRRGP62508 458 aa24.16■■□□□ 1.46
SPTSSA-201ENST00000298130 RCAN2Q14206 197 aa24.16■■□□□ 1.46
SPTSSA-201ENST00000298130 C16orf72Q14CZ0 275 aa24.16■■□□□ 1.46
SPTSSA-201ENST00000298130 PARP15Q460N3 678 aa24.16■■□□□ 1.46
SPTSSA-201ENST00000298130 GLB1LQ6UWU2 654 aa24.16■■□□□ 1.46
SPTSSA-201ENST00000298130 LINGO4Q6UY18 593 aa24.16■■□□□ 1.46
SPTSSA-201ENST00000298130 ASB2Q96Q27 587 aa24.16■■□□□ 1.46
SPTSSA-201ENST00000298130 CHID1Q9BWS9 393 aa24.16■■□□□ 1.46
SPTSSA-201ENST00000298130 DERL2Q9GZP9 239 aa24.16■■□□□ 1.46
SPTSSA-201ENST00000298130 CXorf21Q9HAI6 301 aa24.16■■□□□ 1.46
SPTSSA-201ENST00000298130 SYTL2Q9HCH5 934 aa24.16■■□□□ 1.46
SPTSSA-201ENST00000298130 ANAPC2Q9UJX6 822 aa24.16■■□□□ 1.46
SPTSSA-201ENST00000298130 ZFP37Q9Y6Q3 630 aaPredicted RBP24.16■■□□□ 1.46
SPTSSA-201ENST00000298130 A0A1W2PPW3 197 aa24.16■■□□□ 1.46
SPTSSA-201ENST00000298130 IQCA1LA6NCM1 817 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms