RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 DCTN3O75935 186 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 HLA-EP13747 358 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 UGT1A6P19224 532 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 UGT1A1P22309 533 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 UGT1A4P22310 534 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 UGT1A3P35503 534 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 UGT1A5P35504 534 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 ITPRIPL2Q3MIP1 535 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 DPPA4Q7L190 304 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 NXPE1Q8N323 547 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 RHEBL1Q8TAI7 183 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 FAM81AQ8TBF8 368 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 PTERQ96BW5 349 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 CCDC126Q96EE4 140 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 TSC22D3Q99576 134 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 DERL2Q9GZP9 239 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 DRC3Q9H069 523 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 TFB2MQ9H5Q4 396 aaKnown RBP15.41■□□□□ 0.06
LSM6-201ENST00000296581 PKD2L2Q9NZM6 624 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 THAP10Q9P2Z0 257 aaPredicted RBP15.41■□□□□ 0.06
LSM6-201ENST00000296581 GALPQ9UBC7 116 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 CRLS1Q9UJA2 301 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 HCN2Q9UL51 889 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 PLXNA2O75051 1894 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 H3BMM5 538 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 KAT7O95251 611 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 SKIV2L2P42285 1042 aaKnown RBP15.41■□□□□ 0.06
LSM6-201ENST00000296581 RALGDSQ12967 914 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 RIPK1Q13546 671 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 ELAVL3Q14576 367 aaKnown RBP15.41■□□□□ 0.06
LSM6-201ENST00000296581 GALNTL6Q49A17 601 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 RFLNAQ6ZTI6 216 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 MTSS1LQ765P7 747 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 ARHGAP22Q7Z5H3 698 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 NKAPQ8N5F7 415 aaKnown RBP15.41■□□□□ 0.06
LSM6-201ENST00000296581 GBP7Q8N8V2 638 aaPredicted RBP15.41■□□□□ 0.06
LSM6-201ENST00000296581 CD200R1Q8TD46 325 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 DTX3LQ8TDB6 740 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 OR8D1Q8WZ84 308 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 FAM136AQ96C01 138 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 SGF29Q96ES7 293 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 CCDC97Q96F63 343 aaPredicted RBP15.41■□□□□ 0.06
LSM6-201ENST00000296581 SLC30A3Q99726 388 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 CLPBQ9H078 707 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 ALG9Q9H6U8 611 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 NFKBIL1Q9UBC1 381 aaPredicted RBP15.41■□□□□ 0.06
LSM6-201ENST00000296581 EPS15L1Q9UBC2 864 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 TRMT6Q9UJA5 497 aaKnown RBP15.41■□□□□ 0.06
LSM6-201ENST00000296581 PPM1HQ9ULR3 514 aa15.41■□□□□ 0.06
LSM6-201ENST00000296581 REV3LO60673 3130 aa15.4■□□□□ 0.06
LSM6-201ENST00000296581 A8MT66 165 aa15.4■□□□□ 0.06
LSM6-201ENST00000296581 POU3F3P20264 500 aaPredicted RBP15.4■□□□□ 0.06
LSM6-201ENST00000296581 GRIA2P42262 883 aa15.4■□□□□ 0.06
LSM6-201ENST00000296581 KCNC1P48547 511 aa15.4■□□□□ 0.06
LSM6-201ENST00000296581 NAGLUP54802 743 aa15.4■□□□□ 0.06
LSM6-201ENST00000296581 DCDC1P59894 354 aa15.4■□□□□ 0.06
LSM6-201ENST00000296581 ATP6V0D1P61421 351 aa15.4■□□□□ 0.06
LSM6-201ENST00000296581 RCN2Q14257 317 aa15.4■□□□□ 0.06
LSM6-201ENST00000296581 HSF5Q4G112 596 aaPredicted RBP15.4■□□□□ 0.06
LSM6-201ENST00000296581 UGT3A1Q6NUS8 523 aa15.4■□□□□ 0.06
LSM6-201ENST00000296581 CHRDL2Q6WN34 429 aa15.4■□□□□ 0.06
LSM6-201ENST00000296581 PARS2Q7L3T8 475 aaKnown RBP15.4■□□□□ 0.06
LSM6-201ENST00000296581 TTC7BQ86TV6 843 aa15.4■□□□□ 0.06
LSM6-201ENST00000296581 NECTIN4Q96NY8 510 aa15.4■□□□□ 0.06
LSM6-201ENST00000296581 BOCQ9BWV1 1114 aa15.4■□□□□ 0.06
LSM6-201ENST00000296581 NOP53Q9NZM5 478 aaKnown RBP15.4■□□□□ 0.06
LSM6-201ENST00000296581 MARCOQ9UEW3 520 aaPredicted RBP15.4■□□□□ 0.06
LSM6-201ENST00000296581 GNPTGQ9UJJ9 305 aa15.4■□□□□ 0.06
LSM6-201ENST00000296581 SARDHQ9UL12 918 aa15.4■□□□□ 0.06
LSM6-201ENST00000296581 L3MBTL1Q9Y468 752 aa15.4■□□□□ 0.06
LSM6-201ENST00000296581 NEMP2A6NFY4 417 aa15.4■□□□□ 0.06
LSM6-201ENST00000296581 F8W8V4 182 aa15.4■□□□□ 0.06
LSM6-201ENST00000296581 ZSCAN9O15535 394 aaPredicted RBP15.4■□□□□ 0.06
LSM6-201ENST00000296581 HSPA4LO95757 839 aa15.4■□□□□ 0.06
LSM6-201ENST00000296581 TSPAN12O95859 305 aa15.4■□□□□ 0.06
LSM6-201ENST00000296581 ALOX15P16050 662 aaPredicted RBP15.4■□□□□ 0.06
LSM6-201ENST00000296581 XPAP23025 273 aaPredicted RBP15.4■□□□□ 0.06
LSM6-201ENST00000296581 ITGB7P26010 798 aa15.4■□□□□ 0.06
LSM6-201ENST00000296581 MMP12P39900 470 aa15.4■□□□□ 0.06
LSM6-201ENST00000296581 CLCN7P51798 805 aa15.4■□□□□ 0.06
LSM6-201ENST00000296581 NFKB2Q00653 900 aa15.4■□□□□ 0.06
LSM6-201ENST00000296581 SERPINA13PQ6UXR4 307 aa15.4■□□□□ 0.06
LSM6-201ENST00000296581 SLC22A9Q8IVM8 553 aa15.4■□□□□ 0.06
LSM6-201ENST00000296581 WDR75Q8IWA0 830 aaKnown RBP15.4■□□□□ 0.06
LSM6-201ENST00000296581 SIDT2Q8NBJ9 832 aaKnown RBP15.4■□□□□ 0.06
LSM6-201ENST00000296581 SMRP1Q8NCR6 262 aa15.4■□□□□ 0.06
LSM6-201ENST00000296581 ZFAND2BQ8WV99 257 aa15.4■□□□□ 0.06
LSM6-201ENST00000296581 KIAA1191Q96A73 305 aa15.4■□□□□ 0.06
LSM6-201ENST00000296581 ULK4Q96C45 1275 aa15.4■□□□□ 0.06
LSM6-201ENST00000296581 FAM129BQ96TA1 746 aa15.4■□□□□ 0.06
LSM6-201ENST00000296581 HAO1Q9UJM8 370 aa15.4■□□□□ 0.06
LSM6-201ENST00000296581 ZNF232Q9UNY5 417 aa15.4■□□□□ 0.06
LSM6-201ENST00000296581 GOLGA8CPA6NN73 597 aa15.39■□□□□ 0.05
LSM6-201ENST00000296581 KPNA3O00505 521 aaPredicted RBP15.39■□□□□ 0.05
LSM6-201ENST00000296581 NPHS1O60500 1241 aa15.39■□□□□ 0.05
LSM6-201ENST00000296581 IPO13O94829 963 aaKnown RBP15.39■□□□□ 0.05
LSM6-201ENST00000296581 UBOX5O94941 541 aa15.39■□□□□ 0.05
LSM6-201ENST00000296581 KITP10721 976 aa15.39■□□□□ 0.05
LSM6-201ENST00000296581 CHRM3P20309 590 aa15.39■□□□□ 0.05
LSM6-201ENST00000296581 KCNA5P22460 613 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms