RNA–Protein interactions for RNA: ENST00000295550.8

COL6A3-201, Transcript of collagen type VI alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A3, Length 10,749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-201ENST00000295550 NMUR2Q9GZQ4 415 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.81□□□□□ -0.84
COL6A3-201ENST00000295550 C4BPAP04003 597 aaKnown RBP9.81□□□□□ -0.84
COL6A3-201ENST00000295550 GOT1P17174 413 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 CCR3P51677 355 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 SLC7A2P52569 658 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 BLMHQ13867 455 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 NEPROQ6NW34 567 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 SLC4A11Q8NBS3 891 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 ZNF548Q8NEK5 533 aaPredicted RBP9.81□□□□□ -0.84
COL6A3-201ENST00000295550 STAG3L4Q8TBR4 150 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 AJAP1Q9UKB5 411 aaPredicted RBP9.81□□□□□ -0.84
COL6A3-201ENST00000295550 POLR3HQ9Y535 204 aaPredicted RBP9.81□□□□□ -0.84
COL6A3-201ENST00000295550 ULK1O75385 1050 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 CLCN5P51795 746 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 STXBP1P61764 594 aaKnown RBP9.81□□□□□ -0.84
COL6A3-201ENST00000295550 EML3Q32P44 896 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 C4orf46Q504U0 113 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 JAZF1Q86VZ6 243 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 SHISA4Q96DD7 197 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 NIFKQ9BYG3 293 aaKnown RBP9.81□□□□□ -0.84
COL6A3-201ENST00000295550 PCDH18Q9HCL0 1135 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 S100A14Q9HCY8 104 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 PRKAB1Q9Y478 270 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 SATL1Q86VE3 508 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 POF1BQ8WVV4 589 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 MECRQ9BV79 373 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 INTS7Q9NVH2 962 aaKnown RBP9.81□□□□□ -0.84
COL6A3-201ENST00000295550 PACSIN3Q9UKS6 424 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 SAMD4AQ9UPU9 718 aaKnown RBP9.81□□□□□ -0.84
COL6A3-201ENST00000295550 PTPN20Q4JDL3 420 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 CTXN3Q4LDR2 81 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 ZC3H12AQ5D1E8 599 aaKnown RBP9.81□□□□□ -0.84
COL6A3-201ENST00000295550 ZNF280DQ6N043 979 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.81□□□□□ -0.84
COL6A3-201ENST00000295550 TMCO6Q96DC7 493 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 LGMNQ99538 433 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 FAIM2Q9BWQ8 316 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 TMEM168Q9H0V1 697 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 DPPA5A6NC42 116 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 ACADMP11310 421 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 HECTD3Q5T447 861 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 ANKRD26P1Q6NSI1 321 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 LCLAT1Q6UWP7 414 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 RGS17Q9UGC6 210 aaPredicted RBP9.81□□□□□ -0.84
COL6A3-201ENST00000295550 PSME2Q9UL46 239 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 BMP7P18075 431 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 PRKAG1P54619 331 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 RPL6Q02878 288 aaKnown RBP9.81□□□□□ -0.84
COL6A3-201ENST00000295550 AHCYL2Q96HN2 611 aaKnown RBP9.81□□□□□ -0.84
COL6A3-201ENST00000295550 ACAT2Q9BWD1 397 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 AASDHPPTQ9NRN7 309 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 DNAJC11Q9NVH1 559 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 CDH22Q9UJ99 828 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 NR2E1Q9Y466 385 aa9.81□□□□□ -0.84
COL6A3-201ENST00000295550 MARF1Q9Y4F3 1742 aaKnown RBP9.8□□□□□ -0.84
COL6A3-201ENST00000295550 ABHD14A-ACY1A0A1B0GW23 586 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 RIIAD1A6NNX1 92 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 SLC28A2O43868 658 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 GATBO75879 557 aaKnown RBP9.8□□□□□ -0.84
COL6A3-201ENST00000295550 UNGP13051 313 aaPredicted RBP9.8□□□□□ -0.84
COL6A3-201ENST00000295550 CD86P42081 329 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 SLC5A3P53794 718 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 FASTKD3Q14CZ7 662 aaKnown RBP9.8□□□□□ -0.84
COL6A3-201ENST00000295550 C6orf183Q5T699 404 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 P2RY8Q86VZ1 359 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 ELMO1Q92556 727 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 KLHL5Q96PQ7 755 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 NPAS2Q99743 824 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 EIF2B3Q9NR50 452 aaKnown RBP9.8□□□□□ -0.84
COL6A3-201ENST00000295550 EGFL7Q9UHF1 273 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 MAGEL2Q9UJ55 1249 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 MAU2Q9Y6X3 613 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 A0A075B6Q4 140 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 SH3D21A4FU49 640 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 NOTOA8MTQ0 251 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 H0Y858 1186 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 SLC30A4O14863 429 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 TCEAL1Q15170 157 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 IQSEC1Q6DN90 963 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 THAP5Q7Z6K1 395 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 TMEM110Q86TL2 294 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 PPP1R13LQ8WUF5 828 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 ERLEC1Q96DZ1 483 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 MGME1Q9BQP7 344 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 TKTL2Q9H0I9 626 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 PTTG2Q9NZH5 202 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 SNCAIPQ9Y6H5 919 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 ARL2P36404 184 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 KCTD19Q17RG1 926 aaPredicted RBP9.8□□□□□ -0.84
COL6A3-201ENST00000295550 PRR23CQ6ZRP0 262 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 ING5Q8WYH8 240 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 CPXM1Q96SM3 734 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 GPER1Q99527 375 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 SDCBP2Q9H190 292 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 NECTIN3Q9NQS3 549 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 EIF3KQ9UBQ5 218 aaKnown RBP9.8□□□□□ -0.84
COL6A3-201ENST00000295550 LAMB2P55268 1798 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 FAM86C2PA6NEL3 165 aa9.8□□□□□ -0.84
COL6A3-201ENST00000295550 CAPN8A6NHC0 703 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms