RNA–Protein interactions for RNA: ENST00000290295.7

HOXB13-201, Transcript of homeobox B13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB13, Length 3,467 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB13-201ENST00000290295 PLCL1Q15111 1095 aa13.04□□□□□ -0.32
HOXB13-201ENST00000290295 OTUD1Q5VV17 481 aaPredicted RBP13.04□□□□□ -0.32
HOXB13-201ENST00000290295 PPP2R2DQ66LE6 453 aa13.04□□□□□ -0.32
HOXB13-201ENST00000290295 MRPL10Q7Z7H8 261 aaKnown RBP13.04□□□□□ -0.32
HOXB13-201ENST00000290295 ACVR1CQ8NER5 493 aa13.04□□□□□ -0.32
HOXB13-201ENST00000290295 PNPT1Q8TCS8 783 aaKnown RBP13.04□□□□□ -0.32
HOXB13-201ENST00000290295 SLC39A3Q9BRY0 314 aa13.04□□□□□ -0.32
HOXB13-201ENST00000290295 C11orf84Q9BUA3 381 aaPredicted RBP13.04□□□□□ -0.32
HOXB13-201ENST00000290295 OSBPL2Q9H1P3 480 aa13.04□□□□□ -0.32
HOXB13-201ENST00000290295 CCSER2Q9H7U1 834 aa13.04□□□□□ -0.32
HOXB13-201ENST00000290295 HMG20AQ9NP66 347 aa13.04□□□□□ -0.32
HOXB13-201ENST00000290295 MRGBPQ9NV56 204 aa13.04□□□□□ -0.32
HOXB13-201ENST00000290295 TRPM5Q9NZQ8 1165 aa13.04□□□□□ -0.32
HOXB13-201ENST00000290295 GMPR2Q9P2T1 348 aaKnown RBP13.04□□□□□ -0.32
HOXB13-201ENST00000290295 PCDHGA3Q9Y5H0 932 aa13.04□□□□□ -0.32
HOXB13-201ENST00000290295 H0Y626 953 aa13.04□□□□□ -0.32
HOXB13-201ENST00000290295 SERPINF2P08697 491 aa13.04□□□□□ -0.32
HOXB13-201ENST00000290295 ALOX5P09917 674 aa13.04□□□□□ -0.32
HOXB13-201ENST00000290295 IDUAP35475 653 aa13.04□□□□□ -0.32
HOXB13-201ENST00000290295 MLLT10P55197 1068 aa13.04□□□□□ -0.32
HOXB13-201ENST00000290295 ELAVL2Q12926 359 aaKnown RBP13.04□□□□□ -0.32
HOXB13-201ENST00000290295 ALFQ53S48 1182 aa13.04□□□□□ -0.32
HOXB13-201ENST00000290295 RAB44Q7Z6P3 723 aaPredicted RBP13.04□□□□□ -0.32
HOXB13-201ENST00000290295 CLIP4Q8N3C7 705 aa13.04□□□□□ -0.32
HOXB13-201ENST00000290295 RTP3Q9BQQ7 232 aa13.04□□□□□ -0.32
HOXB13-201ENST00000290295 TTPALQ9BTX7 342 aa13.04□□□□□ -0.32
HOXB13-201ENST00000290295 SLC25A23Q9BV35 468 aa13.04□□□□□ -0.32
HOXB13-201ENST00000290295 ATP13A1Q9HD20 1204 aa13.04□□□□□ -0.32
HOXB13-201ENST00000290295 POLE4Q9NR33 117 aa13.04□□□□□ -0.32
HOXB13-201ENST00000290295 A0A1W2PQ45 241 aaPredicted RBP13.03□□□□□ -0.32
HOXB13-201ENST00000290295 A0A1W2PQY0 241 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 I6L893 689 aaPredicted RBP13.03□□□□□ -0.32
HOXB13-201ENST00000290295 EI24O14681 340 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 ENO2P09104 434 aaPredicted RBP13.03□□□□□ -0.32
HOXB13-201ENST00000290295 TNK2Q07912 1038 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 PLD1Q13393 1074 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 ATP6AP1Q15904 470 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 HABP4Q5JVS0 413 aaKnown RBP13.03□□□□□ -0.32
HOXB13-201ENST00000290295 CLLU1OSQ5K130 101 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 CCNYL2Q5T2Q4 361 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 SMYD5Q6GMV2 418 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 FAM171BQ6P995 826 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 SNX31Q8N9S9 440 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 ABHD11Q8NFV4 315 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 SKA2Q8WVK7 121 aaPredicted RBP13.03□□□□□ -0.32
HOXB13-201ENST00000290295 NXNL1Q96CM4 212 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 CENPNQ96H22 339 aaPredicted RBP13.03□□□□□ -0.32
HOXB13-201ENST00000290295 BTN2A3PQ96KV6 586 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 PSD2Q9BQI7 771 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 YTHDF1Q9BYJ9 559 aaKnown RBP13.03□□□□□ -0.32
HOXB13-201ENST00000290295 AGPAT4Q9NRZ5 378 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 SMPD3Q9NY59 655 aaPredicted RBP13.03□□□□□ -0.32
HOXB13-201ENST00000290295 ANKRD6Q9Y2G4 727 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 A0A1W2PQ67 120 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 NRP2O60462 931 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 NDUFS3O75489 264 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 RHOCP08134 193 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 MBL2P11226 248 aaPredicted RBP13.03□□□□□ -0.32
HOXB13-201ENST00000290295 HPCAL1P37235 193 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 KCNQ1P51787 676 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 TMTC4Q5T4D3 741 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 FBXL22Q6P050 247 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 PRR23BQ6ZRT6 265 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 SPPL2CQ8IUH8 684 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 PELI3Q8N2H9 469 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 CARNMT1Q8N4J0 409 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 NAT16Q8N8M0 369 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 SNX19Q92543 992 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 NT5C3BQ969T7 300 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 MAELQ96JY0 434 aaKnown RBP13.03□□□□□ -0.32
HOXB13-201ENST00000290295 ZBED2Q9BTP6 218 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 RHOJQ9H4E5 214 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 TMEM161AQ9NX61 479 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 MOSPD1Q9UJG1 213 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 ERVK-11Q9UQG0 969 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 USP3Q9Y6I4 520 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 DLX3O60479 287 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 RASAL1O95294 804 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 CPNE6O95741 557 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 SBK3P0C264 359 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 HNRNPLP14866 589 aaKnown RBP eCLIP13.03□□□□□ -0.32
HOXB13-201ENST00000290295 SCAPQ12770 1279 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 CAMK2BQ13554 666 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 NDUFA5Q16718 116 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 AGAP9Q5VTM2 703 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 ZNF773Q6PK81 442 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 BTLAQ7Z6A9 289 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 SCD5Q86SK9 330 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 OR7D4Q8NG98 312 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 FEM1CQ96JP0 617 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 CEP295NLQ96MC4 621 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 ZNF641Q96N77 438 aaPredicted RBP13.03□□□□□ -0.32
HOXB13-201ENST00000290295 PPP1R2P1Q96PQ5 205 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 SEZ6LQ9BYH1 1024 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 RNF38Q9H0F5 515 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 SMOC2Q9H3U7 446 aa13.03□□□□□ -0.32
HOXB13-201ENST00000290295 SOX17Q9H6I2 414 aaPredicted RBP13.03□□□□□ -0.32
HOXB13-201ENST00000290295 OLA1Q9NTK5 396 aaKnown RBP13.03□□□□□ -0.32
HOXB13-201ENST00000290295 TANC1Q9C0D5 1861 aa13.02□□□□□ -0.32
HOXB13-201ENST00000290295 LCTP09848 1927 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms