RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 SLC25A41Q8N5S1 370 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 DCBLD1Q8N8Z6 715 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 ATL2Q8NHH9 583 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 CCHCR1Q8TD31 782 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 GLYATL1Q969I3 302 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 MS4A14Q96JA4 679 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 ALS2CR12Q96Q35 445 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 APOL2Q9BQE5 337 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 ZSCAN5AQ9BUG6 496 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 FICDQ9BVA6 458 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 SLC13A1Q9BZW2 595 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 CYP4F12Q9HCS2 524 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 SMOXQ9NWM0 555 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 PKD2L2Q9NZM6 624 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 SLC23A2Q9UGH3 650 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 FEZ2Q9UHY8 353 aaPredicted RBP9.07□□□□□ -0.96
HMGN1-201ENST00000288344 APOBEC2Q9Y235 224 aaKnown RBP9.07□□□□□ -0.96
HMGN1-201ENST00000288344 ARL5AQ9Y689 179 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 ACACAQ13085 2346 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 TRBV5-4A0A0C4DH59 114 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 A0A1W2PNU3 283 aaPredicted RBP9.06□□□□□ -0.96
HMGN1-201ENST00000288344 FFAR2O15552 330 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 UGT1A9O60656 530 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 PPFIA2O75334 1257 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 RFPL3O75679 317 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 ZNF8P17098 575 aaPredicted RBP9.06□□□□□ -0.96
HMGN1-201ENST00000288344 UGT1A6P19224 532 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 UGT1A1P22309 533 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 UGT1A4P22310 534 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 AK4P27144 223 aaPredicted RBP9.06□□□□□ -0.96
HMGN1-201ENST00000288344 UGT1A3P35503 534 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 UGT1A5P35504 534 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 CLDN6P56747 220 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 B4GALNT1Q00973 533 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 ACVR1Q04771 509 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 SQSTM1Q13501 440 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 ELOCQ15369 112 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 CHRNA6Q15825 494 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 KCTD19Q17RG1 926 aaPredicted RBP9.06□□□□□ -0.96
HMGN1-201ENST00000288344 SWI5Q1ZZU3 235 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 KIF26BQ2KJY2 2108 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 PERM1Q5SV97 790 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 ZNF648Q5T619 568 aaPredicted RBP9.06□□□□□ -0.96
HMGN1-201ENST00000288344 SEL1L2Q5TEA6 688 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 CCDC181Q5TID7 509 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 RAET1GQ6H3X3 334 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 GUSBP11Q6P575 273 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 DHRS13Q6UX07 377 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 ZNF534Q76KX8 674 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 TMPRSS12Q86WS5 348 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 NAGSQ8N159 534 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 KDF1Q8NAX2 398 aaPredicted RBP9.06□□□□□ -0.96
HMGN1-201ENST00000288344 ACTRT1Q8TDG2 376 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 PBKQ96KB5 322 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 GPR63Q9BZJ6 419 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 RMI1Q9H9A7 625 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 UGT1A7Q9HAW7 530 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 UGT1A10Q9HAW8 530 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 UGT1A8Q9HAW9 530 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 BPIFA1Q9NP55 256 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 CASS4Q9NQ75 786 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 TRMT1Q9NXH9 659 aaKnown RBP9.06□□□□□ -0.96
HMGN1-201ENST00000288344 APPL1Q9UKG1 709 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 ANGPTL2Q9UKU9 493 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 SNX12Q9UMY4 172 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 ITPR1Q14643 2758 aa9.06□□□□□ -0.96
HMGN1-201ENST00000288344 IGLV3-16A0A075B6K0 115 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 A0A1W2PQM1 296 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 ERI2A8K979 691 aaKnown RBP9.05□□□□□ -0.96
HMGN1-201ENST00000288344 GPR89AB7ZAQ6 455 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 TAF4O00268 1085 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 ZNF185O15231 689 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 INPP4BO15327 924 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 GPR39O43194 453 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 ZSCAN12O43309 604 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 B4GAT1O43505 415 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 BUD23O43709 281 aaKnown RBP9.05□□□□□ -0.96
HMGN1-201ENST00000288344 CEP104O60308 925 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 OPA1O60313 960 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 GPR89BP0CG08 455 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 PNLIPP16233 465 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 LPOP22079 712 aaPredicted RBP9.05□□□□□ -0.96
HMGN1-201ENST00000288344 PDX1P52945 283 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 E2F1Q01094 437 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 SNX1Q13596 522 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 OCLNQ16625 522 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 ZNF569Q5MCW4 686 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 CERCAMQ5T4B2 595 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 ZDHHC20Q5W0Z9 365 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 CCDC70Q6NSX1 233 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 RD3Q7Z3Z2 195 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 GKN2Q86XP6 184 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 CREG2Q8IUH2 290 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 DDHD1Q8NEL9 900 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 OR4K2Q8NGD2 314 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 OR13C4Q8NGS5 318 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 SGSM3Q96HU1 749 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 PPP1R2P1Q96PQ5 205 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 OSBPL9Q96SU4 736 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 TBL1YQ9BQ87 522 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms