RNA–Protein interactions for RNA: ENST00000287543.4

MALSU1-201, Transcript of mitochondrial assembly of ribosomal large subunit 1, humanhuman

TSL 2

Gene MALSU1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALSU1-201ENST00000287543 SLC38A3Q99624 504 aa18.7■□□□□ 0.58
MALSU1-201ENST00000287543 TIMM29Q9BSF4 260 aa18.7■□□□□ 0.58
MALSU1-201ENST00000287543 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.7■□□□□ 0.58
MALSU1-201ENST00000287543 DPH1Q9BZG8 443 aa18.7■□□□□ 0.58
MALSU1-201ENST00000287543 KCNK4Q9NYG8 393 aa18.7■□□□□ 0.58
MALSU1-201ENST00000287543 PRKAB1Q9Y478 270 aa18.7■□□□□ 0.58
MALSU1-201ENST00000287543 CAPN6Q9Y6Q1 641 aa18.7■□□□□ 0.58
MALSU1-201ENST00000287543 KNTC1P50748 2209 aa18.7■□□□□ 0.58
MALSU1-201ENST00000287543 KMT2BQ9UMN6 2715 aaPredicted RBP18.7■□□□□ 0.58
MALSU1-201ENST00000287543 USP24Q9UPU5 2620 aa18.7■□□□□ 0.58
MALSU1-201ENST00000287543 ASPMQ8IZT6 3477 aa18.69■□□□□ 0.58
MALSU1-201ENST00000287543 GLYATL1P3A0A0U1RQE8 302 aa18.69■□□□□ 0.58
MALSU1-201ENST00000287543 PPM1DO15297 605 aa18.69■□□□□ 0.58
MALSU1-201ENST00000287543 CCDC175P0C221 793 aa18.69■□□□□ 0.58
MALSU1-201ENST00000287543 JMJD7P0C870 316 aa18.69■□□□□ 0.58
MALSU1-201ENST00000287543 F3P13726 295 aa18.69■□□□□ 0.58
MALSU1-201ENST00000287543 PSMB4P28070 264 aa18.69■□□□□ 0.58
MALSU1-201ENST00000287543 CD1CP29017 333 aa18.69■□□□□ 0.58
MALSU1-201ENST00000287543 STIP1P31948 543 aaKnown RBP18.69■□□□□ 0.58
MALSU1-201ENST00000287543 ADRA1AP35348 466 aa18.69■□□□□ 0.58
MALSU1-201ENST00000287543 TRA2AQ13595 282 aaKnown RBP eCLIP18.69■□□□□ 0.58
MALSU1-201ENST00000287543 P3H1Q32P28 736 aa18.69■□□□□ 0.58
MALSU1-201ENST00000287543 AMZ1Q400G9 498 aa18.69■□□□□ 0.58
MALSU1-201ENST00000287543 ATP13A5Q4VNC0 1218 aa18.69■□□□□ 0.58
MALSU1-201ENST00000287543 FOXR1Q6PIV2 292 aa18.69■□□□□ 0.58
MALSU1-201ENST00000287543 CLEC14AQ86T13 490 aa18.69■□□□□ 0.58
MALSU1-201ENST00000287543 SLC37A2Q8TED4 501 aa18.69■□□□□ 0.58
MALSU1-201ENST00000287543 PATE1Q8WXA2 126 aa18.69■□□□□ 0.58
MALSU1-201ENST00000287543 PRR11Q96HE9 360 aaPredicted RBP18.69■□□□□ 0.58
MALSU1-201ENST00000287543 AHCYL2Q96HN2 611 aaKnown RBP18.69■□□□□ 0.58
MALSU1-201ENST00000287543 ALS2CR12Q96Q35 445 aa18.69■□□□□ 0.58
MALSU1-201ENST00000287543 FAM118BQ9BPY3 351 aa18.69■□□□□ 0.58
MALSU1-201ENST00000287543 FOXP3Q9BZS1 431 aa18.69■□□□□ 0.58
MALSU1-201ENST00000287543 ARNT2Q9HBZ2 717 aa18.69■□□□□ 0.58
MALSU1-201ENST00000287543 TBC1D29Q9UFV1 150 aa18.69■□□□□ 0.58
MALSU1-201ENST00000287543 ATXN7L1Q9ULK2 861 aaPredicted RBP18.69■□□□□ 0.58
MALSU1-201ENST00000287543 KCNK6Q9Y257 313 aa18.69■□□□□ 0.58
MALSU1-201ENST00000287543 PCDHGA7Q9Y5G6 932 aa18.69■□□□□ 0.58
MALSU1-201ENST00000287543 IGF2RP11717 2491 aa18.69■□□□□ 0.58
MALSU1-201ENST00000287543 SHROOM3Q8TF72 1996 aa18.69■□□□□ 0.58
MALSU1-201ENST00000287543 AKAP13Q12802 2813 aa18.69■□□□□ 0.58
MALSU1-201ENST00000287543 ANKRD36A6QL64 1941 aa18.68■□□□□ 0.58
MALSU1-201ENST00000287543 LRRK1Q38SD2 2015 aa18.68■□□□□ 0.58
MALSU1-201ENST00000287543 A0A0U1RQJ8 604 aa18.68■□□□□ 0.58
MALSU1-201ENST00000287543 A0A1W2PNU3 283 aaPredicted RBP18.68■□□□□ 0.58
MALSU1-201ENST00000287543 CDRT15L2A8MXV6 281 aa18.68■□□□□ 0.58
MALSU1-201ENST00000287543 SNX2O60749 519 aa18.68■□□□□ 0.58
MALSU1-201ENST00000287543 ZNF7P17097 686 aaPredicted RBP18.68■□□□□ 0.58
MALSU1-201ENST00000287543 UCNP55089 124 aa18.68■□□□□ 0.58
MALSU1-201ENST00000287543 HHEXQ03014 270 aa18.68■□□□□ 0.58
MALSU1-201ENST00000287543 TMEM115Q12893 351 aaPredicted RBP18.68■□□□□ 0.58
MALSU1-201ENST00000287543 INSCQ1MX18 579 aa18.68■□□□□ 0.58
MALSU1-201ENST00000287543 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.68■□□□□ 0.58
MALSU1-201ENST00000287543 BROXQ5VW32 411 aa18.68■□□□□ 0.58
MALSU1-201ENST00000287543 SLITRK4Q8IW52 837 aa18.68■□□□□ 0.58
MALSU1-201ENST00000287543 KLHDC8BQ8IXV7 354 aa18.68■□□□□ 0.58
MALSU1-201ENST00000287543 FAM71DQ8N9W8 422 aa18.68■□□□□ 0.58
MALSU1-201ENST00000287543 OR10G6Q8NH81 332 aa18.68■□□□□ 0.58
MALSU1-201ENST00000287543 SLC35B2Q8TB61 432 aa18.68■□□□□ 0.58
MALSU1-201ENST00000287543 EPB41L1Q9H4G0 881 aa18.68■□□□□ 0.58
MALSU1-201ENST00000287543 ARFGAP3Q9NP61 516 aa18.68■□□□□ 0.58
MALSU1-201ENST00000287543 KLC4Q9NSK0 619 aa18.68■□□□□ 0.58
MALSU1-201ENST00000287543 SMOXQ9NWM0 555 aa18.68■□□□□ 0.58
MALSU1-201ENST00000287543 PCYT1BQ9Y5K3 369 aaPredicted RBP18.68■□□□□ 0.58
MALSU1-201ENST00000287543 DNMT3AQ9Y6K1 912 aaPredicted RBP18.68■□□□□ 0.58
MALSU1-201ENST00000287543 TDRD6O60522 2096 aaKnown RBP18.68■□□□□ 0.58
MALSU1-201ENST00000287543 IGHV1OR21-1A0A087WYE8 117 aa18.67■□□□□ 0.58
MALSU1-201ENST00000287543 A6NCN8 305 aa18.67■□□□□ 0.58
MALSU1-201ENST00000287543 HGSO14964 777 aaPredicted RBP18.67■□□□□ 0.58
MALSU1-201ENST00000287543 CASC3O15234 703 aaKnown RBP18.67■□□□□ 0.58
MALSU1-201ENST00000287543 UGT1A5P35504 534 aa18.67■□□□□ 0.58
MALSU1-201ENST00000287543 RPS6KA1Q15418 735 aa18.67■□□□□ 0.58
MALSU1-201ENST00000287543 CHRNA6Q15825 494 aa18.67■□□□□ 0.58
MALSU1-201ENST00000287543 ZNF648Q5T619 568 aaPredicted RBP18.67■□□□□ 0.58
MALSU1-201ENST00000287543 PHF19Q5T6S3 580 aa18.67■□□□□ 0.58
MALSU1-201ENST00000287543 FAM151BQ6UXP7 276 aa18.67■□□□□ 0.58
MALSU1-201ENST00000287543 WASH2PQ6VEQ5 465 aa18.67■□□□□ 0.58
MALSU1-201ENST00000287543 USP53Q70EK8 1073 aa18.67■□□□□ 0.58
MALSU1-201ENST00000287543 LRRC8AQ8IWT6 810 aa18.67■□□□□ 0.58
MALSU1-201ENST00000287543 OR4D9Q8NGE8 314 aa18.67■□□□□ 0.58
MALSU1-201ENST00000287543 ZNF398Q8TD17 642 aa18.67■□□□□ 0.58
MALSU1-201ENST00000287543 KCNE4Q8WWG9 221 aa18.67■□□□□ 0.58
MALSU1-201ENST00000287543 ZNF514Q96K75 400 aaPredicted RBP18.67■□□□□ 0.58
MALSU1-201ENST00000287543 TBL1YQ9BQ87 522 aa18.67■□□□□ 0.58
MALSU1-201ENST00000287543 GORASP1Q9BQQ3 440 aa18.67■□□□□ 0.58
MALSU1-201ENST00000287543 B3GNT4Q9C0J1 378 aa18.67■□□□□ 0.58
MALSU1-201ENST00000287543 WASH6PQ9NQA3 447 aa18.67■□□□□ 0.58
MALSU1-201ENST00000287543 LOXL2Q9Y4K0 774 aa18.67■□□□□ 0.58
MALSU1-201ENST00000287543 GOLGA4Q13439 2230 aaKnown RBP18.66■□□□□ 0.58
MALSU1-201ENST00000287543 TRBV23OR9-2A0A075B6M9 112 aa18.66■□□□□ 0.58
MALSU1-201ENST00000287543 KLHL33A6NCF5 533 aa18.66■□□□□ 0.58
MALSU1-201ENST00000287543 DUX1O43812 170 aa18.66■□□□□ 0.58
MALSU1-201ENST00000287543 IDSP22304 550 aa18.66■□□□□ 0.58
MALSU1-201ENST00000287543 HADHAP40939 763 aa18.66■□□□□ 0.58
MALSU1-201ENST00000287543 EPHA4P54764 986 aa18.66■□□□□ 0.58
MALSU1-201ENST00000287543 CCDC173Q0VFZ6 552 aa18.66■□□□□ 0.58
MALSU1-201ENST00000287543 TMEM71Q6P5X7 295 aa18.66■□□□□ 0.58
MALSU1-201ENST00000287543 CRTC3Q6UUV7 619 aa18.66■□□□□ 0.58
MALSU1-201ENST00000287543 PDZD3Q86UT5 571 aa18.66■□□□□ 0.58
MALSU1-201ENST00000287543 TRAPPC5Q8IUR0 188 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms