RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 INTS10Q9NVR2 710 aaKnown RBP10.31□□□□□ -0.76
SKA1-201ENST00000285116 CMTM6Q9NX76 183 aa10.31□□□□□ -0.76
SKA1-201ENST00000285116 CHD5Q8TDI0 1954 aa10.31□□□□□ -0.76
SKA1-201ENST00000285116 MUC3AQ02505 3323 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 IGLV3-10A0A075B6K4 115 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 AZIN1O14977 448 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 TREHO43280 583 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 EPOP01588 193 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 RHOQP17081 205 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 LBPP18428 481 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 CAPN3P20807 821 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 IGFBP6P24592 240 aaPredicted RBP10.3□□□□□ -0.76
SKA1-201ENST00000285116 EEF1DP29692 281 aaKnown RBP10.3□□□□□ -0.76
SKA1-201ENST00000285116 IDUAP35475 653 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 POLR2IP36954 125 aaKnown RBP10.3□□□□□ -0.76
SKA1-201ENST00000285116 OPRL1P41146 370 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 MAPK10P53779 464 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 MLLT6P55198 1093 aaPredicted RBP10.3□□□□□ -0.76
SKA1-201ENST00000285116 SH3BP2P78314 561 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 CBX2Q14781 532 aaPredicted RBP10.3□□□□□ -0.76
SKA1-201ENST00000285116 FSCN1Q16658 493 aaKnown RBP10.3□□□□□ -0.76
SKA1-201ENST00000285116 ZNF280DQ6N043 979 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 RAB44Q7Z6P3 723 aaPredicted RBP10.3□□□□□ -0.76
SKA1-201ENST00000285116 SPPL2CQ8IUH8 684 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 DDIASQ8IXT1 998 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 TBC1D21Q8IYX1 336 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 DCP1BQ8IZD4 617 aaKnown RBP10.3□□□□□ -0.76
SKA1-201ENST00000285116 HPS1Q92902 700 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 TMEM125Q96AQ2 219 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 PTERQ96BW5 349 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 LRRC58Q96CX6 371 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 ATOH8Q96SQ7 321 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 CTRCQ99895 268 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 BRINP2Q9C0B6 783 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 FAM105AQ9NUU6 356 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 TMEM248Q9NWD8 314 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 FLRT1Q9NZU1 646 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 GPR45Q9Y5Y3 372 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 C17orf102A2RUQ5 167 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 LSM1O15116 133 aaKnown RBP10.3□□□□□ -0.76
SKA1-201ENST00000285116 LDB2O43679 373 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 KLK8O60259 260 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 TPST1O60507 370 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 EEDO75530 441 aaKnown RBP10.3□□□□□ -0.76
SKA1-201ENST00000285116 SLC2A3P11169 496 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 PTPN2P17706 415 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 CD9P21926 228 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 EEF1B2P24534 225 aaKnown RBP10.3□□□□□ -0.76
SKA1-201ENST00000285116 KCNC1P48547 511 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 CPT1AP50416 773 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 RABGGTBP53611 331 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 ADARB1P78563 741 aaKnown RBP10.3□□□□□ -0.76
SKA1-201ENST00000285116 BFSP2Q13515 415 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 RCAN2Q14206 197 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 TYSND1Q2T9J0 566 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 PITRM1Q5JRX3 1037 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 GTF2IRD2BQ6EKJ0 949 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 LINC00299Q6ZSB3 139 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 CHST15Q7LFX5 561 aaPredicted RBP10.3□□□□□ -0.76
SKA1-201ENST00000285116 CYP2U1Q7Z449 544 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 PLEKHH3Q7Z736 793 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 GTF2IRD2Q86UP8 949 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 METTL23Q86XA0 190 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 OR9I1Q8NGQ6 314 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 TWIST2Q8WVJ9 160 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 HDAC10Q969S8 669 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 SLC39A13Q96H72 371 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 TPK1Q9H3S4 243 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 ALG9Q9H6U8 611 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 GABRQQ9UN88 632 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 HS3ST4Q9Y661 456 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 TLL2Q9Y6L7 1015 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 A0A1W2PP18 115 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 ANGPT2O15123 496 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 ARPC2O15144 300 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 SUPT7LO94864 414 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 KCNH1O95259 989 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 ATXN1LP0C7T5 689 aaKnown RBP10.3□□□□□ -0.76
SKA1-201ENST00000285116 MTHFD2P13995 350 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 RFC2P35250 354 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 HPCAL1P37235 193 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 YAP1P46937 504 aaKnown RBP10.3□□□□□ -0.76
SKA1-201ENST00000285116 AASDHQ4L235 1098 aaPredicted RBP10.3□□□□□ -0.76
SKA1-201ENST00000285116 TIGD5Q53EQ6 642 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 CLEC6AQ6EIG7 209 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 CTU1Q7Z7A3 348 aaKnown RBP10.3□□□□□ -0.76
SKA1-201ENST00000285116 CHCHD4Q8N4Q1 142 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 BPIFB6Q8NFQ5 453 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 NPLOC4Q8TAT6 608 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 NSMCE3Q96MG7 304 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 SERPINB11Q96P15 392 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 SLC39A3Q9BRY0 314 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 RGS18Q9NS28 235 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 GMPR2Q9P2T1 348 aaKnown RBP10.3□□□□□ -0.76
SKA1-201ENST00000285116 ERVK-11Q9UQG0 969 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 TLR6Q9Y2C9 796 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 FIS1Q9Y3D6 152 aa10.3□□□□□ -0.76
SKA1-201ENST00000285116 CROCCQ5TZA2 2017 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 STX16O14662 325 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 KERAO60938 352 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms