RNA–Protein interactions for RNA: ENST00000278193.6

LIN7C-201, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN7C, Length 4,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-201ENST00000278193 UPB1Q9UBR1 384 aa6.4□□□□□ -1.39
LIN7C-201ENST00000278193 BCAP29Q9UHQ4 241 aa6.4□□□□□ -1.39
LIN7C-201ENST00000278193 USP18Q9UMW8 372 aa6.4□□□□□ -1.39
LIN7C-201ENST00000278193 FLVCR2Q9UPI3 526 aa6.4□□□□□ -1.39
LIN7C-201ENST00000278193 FADS3Q9Y5Q0 445 aa6.4□□□□□ -1.39
LIN7C-201ENST00000278193 CNTNAP4Q9C0A0 1308 aa6.4□□□□□ -1.39
LIN7C-201ENST00000278193 NPIPA2E9PIF3 369 aa6.4□□□□□ -1.39
LIN7C-201ENST00000278193 FCGR1AP12314 374 aa6.4□□□□□ -1.39
LIN7C-201ENST00000278193 PTPN6P29350 595 aa6.4□□□□□ -1.39
LIN7C-201ENST00000278193 SLC8A1P32418 973 aa6.4□□□□□ -1.39
LIN7C-201ENST00000278193 PTPN9P43378 593 aa6.4□□□□□ -1.39
LIN7C-201ENST00000278193 BFSP2Q13515 415 aa6.4□□□□□ -1.39
LIN7C-201ENST00000278193 GAMTQ14353 236 aa6.4□□□□□ -1.39
LIN7C-201ENST00000278193 GCKRQ14397 625 aa6.4□□□□□ -1.39
LIN7C-201ENST00000278193 SNX17Q15036 470 aa6.4□□□□□ -1.39
LIN7C-201ENST00000278193 GCNT6Q5T4J0 391 aa6.4□□□□□ -1.39
LIN7C-201ENST00000278193 MBNL2Q5VZF2 373 aaKnown RBP6.4□□□□□ -1.39
LIN7C-201ENST00000278193 GPRIN1Q7Z2K8 1008 aa6.4□□□□□ -1.39
LIN7C-201ENST00000278193 TIGD4Q8IY51 512 aa6.4□□□□□ -1.39
LIN7C-201ENST00000278193 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.4□□□□□ -1.39
LIN7C-201ENST00000278193 ZNF610Q8N9Z0 462 aa6.4□□□□□ -1.39
LIN7C-201ENST00000278193 TMEM104Q8NE00 496 aa6.4□□□□□ -1.39
LIN7C-201ENST00000278193 OR2T34Q8NGX1 318 aa6.4□□□□□ -1.39
LIN7C-201ENST00000278193 FOXJ1Q92949 421 aa6.4□□□□□ -1.39
LIN7C-201ENST00000278193 ULK4Q96C45 1275 aa6.4□□□□□ -1.39
LIN7C-201ENST00000278193 OXNAD1Q96HP4 312 aaPredicted RBP6.4□□□□□ -1.39
LIN7C-201ENST00000278193 NDNQ99608 321 aa6.4□□□□□ -1.39
LIN7C-201ENST00000278193 MUC13Q9H3R2 512 aa6.4□□□□□ -1.39
LIN7C-201ENST00000278193 PCMTD2Q9NV79 361 aa6.4□□□□□ -1.39
LIN7C-201ENST00000278193 GPR55Q9Y2T6 319 aaPredicted RBP6.4□□□□□ -1.39
LIN7C-201ENST00000278193 NEURL4Q96JN8 1562 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 MT-ND5P03915 603 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 KRT8P05787 483 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 HSPD1P10809 573 aaKnown RBP6.39□□□□□ -1.39
LIN7C-201ENST00000278193 SOX18P35713 384 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 RTP1P59025 263 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 NLRP11P59045 1033 aaKnown RBP6.39□□□□□ -1.39
LIN7C-201ENST00000278193 GRAPQ13588 217 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 ALCAMQ13740 583 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 PRKD1Q15139 912 aaPredicted RBP6.39□□□□□ -1.39
LIN7C-201ENST00000278193 STILQ15468 1287 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 SGSM1Q2NKQ1 1148 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 INTS6LQ5JSJ4 861 aaKnown RBP6.39□□□□□ -1.39
LIN7C-201ENST00000278193 WBP2NLQ6ICG8 309 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 RRM2BQ7LG56 351 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 HORMAD1Q86X24 394 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 CADM3Q8N126 398 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 NDNFQ8TB73 568 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 GRAPLQ8TC17 118 aaPredicted RBP6.39□□□□□ -1.39
LIN7C-201ENST00000278193 RNFT2Q96EX2 444 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 LRMDAQ9H2I8 198 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 RIOX1Q9H6W3 641 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 BARHL2Q9NY43 387 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 SEC14L3Q9UDX4 400 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 MID2Q9UJV3 735 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 KIF1AQ12756 1690 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 FRMPD4Q14CM0 1322 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 LOC390937A0A1W2PQ73 354 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 ABCD4O14678 606 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 ITGA4P13612 1032 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 GSPT1P15170 499 aaKnown RBP6.39□□□□□ -1.39
LIN7C-201ENST00000278193 PAICSP22234 425 aaKnown RBP6.39□□□□□ -1.39
LIN7C-201ENST00000278193 PBX3P40426 434 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 KCNQ4P56696 695 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 NRG3P56975 720 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 NKX3-2P78367 333 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 PIGHQ14442 188 aaPredicted RBP6.39□□□□□ -1.39
LIN7C-201ENST00000278193 NR0B2Q15466 257 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 ME3Q16798 604 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 PITRM1Q5JRX3 1037 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 EXOSC6Q5RKV6 272 aaKnown RBP6.39□□□□□ -1.39
LIN7C-201ENST00000278193 SELENOHQ8IZQ5 122 aaKnown RBP6.39□□□□□ -1.39
LIN7C-201ENST00000278193 MRPL50Q8N5N7 158 aaKnown RBP6.39□□□□□ -1.39
LIN7C-201ENST00000278193 FSIP1Q8NA03 581 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 RBM15BQ8NDT2 890 aaKnown RBP6.39□□□□□ -1.39
LIN7C-201ENST00000278193 OR8J1Q8NGP2 316 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 LINGO1Q96FE5 620 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 APOLD1Q96LR9 279 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 INPP4AQ96PE3 977 aaPredicted RBP6.39□□□□□ -1.39
LIN7C-201ENST00000278193 ADI1Q9BV57 179 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 TRIM31Q9BZY9 425 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 DIABLOQ9NR28 239 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 CTSFQ9UBX1 484 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 SCOCQ9UIL1 159 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 SLC22A31A6NKX4 558 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 TEX46H3BTG2 121 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 POLR1CO15160 346 aaPredicted RBP6.39□□□□□ -1.39
LIN7C-201ENST00000278193 DYNC1LI2O43237 492 aaPredicted RBP6.39□□□□□ -1.39
LIN7C-201ENST00000278193 PSMD3O43242 534 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 F9P00740 461 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 ARL1P40616 181 aaPredicted RBP6.39□□□□□ -1.39
LIN7C-201ENST00000278193 CSNK2A1P68400 391 aaPredicted RBP6.39□□□□□ -1.39
LIN7C-201ENST00000278193 ATP2C1P98194 919 aaPredicted RBP6.39□□□□□ -1.39
LIN7C-201ENST00000278193 OCA2Q04671 838 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 MZT1Q08AG7 82 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 TRIP4Q15650 581 aaPredicted RBP6.39□□□□□ -1.39
LIN7C-201ENST00000278193 TCHHL1Q5QJ38 904 aaPredicted RBP6.39□□□□□ -1.39
LIN7C-201ENST00000278193 AGBL2Q5U5Z8 902 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 CSNK2A3Q8NEV1 391 aa6.39□□□□□ -1.39
LIN7C-201ENST00000278193 OR2L3Q8NG85 312 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms