RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 SLC30A1Q9Y6M5 507 aa8.85□□□□□ -0.99
TPM3-201ENST00000271850 ZNF106Q9H2Y7 1883 aaKnown RBP8.85□□□□□ -0.99
TPM3-201ENST00000271850 UTP20O75691 2785 aaKnown RBP8.84□□□□□ -0.99
TPM3-201ENST00000271850 MN1Q10571 1320 aaPredicted RBP8.84□□□□□ -0.99
TPM3-201ENST00000271850 C1orf232A0A0U1RR37 186 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 A0A1W2PQJ5 194 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 KCNK1O00180 336 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 GYPCP04921 128 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 CCNYL3P0C7X3 344 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 PIRTP0C851 137 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 F3P13726 295 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 BRAFP15056 766 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 NR1D1P20393 614 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 CCNCP24863 283 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 GJC1P36383 396 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 CD86P42081 329 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 ZNF165P49910 485 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 ATP1A2P50993 1020 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 CDC20Q12834 499 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 GALNT3Q14435 633 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 IGFBP7Q16270 282 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 TDRD12Q587J7 1177 aaKnown RBP8.84□□□□□ -0.99
TPM3-201ENST00000271850 DCAF12Q5T6F0 453 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 TMEM164Q5U3C3 297 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 B4GALNT4Q76KP1 1039 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 LYSMD3Q7Z3D4 306 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 ADGRG6Q86SQ4 1221 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 LRRC49Q8IUZ0 686 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 BBS5Q8N3I7 341 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 TMEM151AQ8N4L1 468 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 IL22RA1Q8N6P7 574 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 NCSTNQ92542 709 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 HDAC11Q96DB2 347 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 PLEKHG4BQ96PX9 1271 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 ZNF670Q9BS34 389 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 CEP41Q9BYV8 373 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 ADNPQ9H2P0 1102 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 AKAP7Q9P0M2 348 aaPredicted RBP8.84□□□□□ -0.99
TPM3-201ENST00000271850 ZNF624Q9P2J8 865 aaPredicted RBP8.84□□□□□ -0.99
TPM3-201ENST00000271850 KLHL3Q9UH77 587 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 IP6K2Q9UHH9 426 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 ZNHIT2Q9UHR6 403 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 TTLL3Q9Y4R7 772 aa8.84□□□□□ -0.99
TPM3-201ENST00000271850 LILRA5A6NI73 299 aa8.83□□□□□ -1
TPM3-201ENST00000271850 ZNF891A8MT65 544 aaPredicted RBP8.83□□□□□ -1
TPM3-201ENST00000271850 ANKRD66B4E2M5 251 aa8.83□□□□□ -1
TPM3-201ENST00000271850 AURKAO14965 403 aa8.83□□□□□ -1
TPM3-201ENST00000271850 CHUKO15111 745 aa8.83□□□□□ -1
TPM3-201ENST00000271850 GPR39O43194 453 aa8.83□□□□□ -1
TPM3-201ENST00000271850 GRID2O43424 1007 aa8.83□□□□□ -1
TPM3-201ENST00000271850 KIF1CO43896 1103 aaKnown RBP8.83□□□□□ -1
TPM3-201ENST00000271850 SNX2O60749 519 aa8.83□□□□□ -1
TPM3-201ENST00000271850 MTX2O75431 263 aa8.83□□□□□ -1
TPM3-201ENST00000271850 STK17BO94768 372 aa8.83□□□□□ -1
TPM3-201ENST00000271850 PROSCO94903 275 aa8.83□□□□□ -1
TPM3-201ENST00000271850 ASMTLO95671 621 aa8.83□□□□□ -1
TPM3-201ENST00000271850 JCHAINP01591 159 aa8.83□□□□□ -1
TPM3-201ENST00000271850 C9P02748 559 aa8.83□□□□□ -1
TPM3-201ENST00000271850 PRKAR1AP10644 381 aa8.83□□□□□ -1
TPM3-201ENST00000271850 STAT5AP42229 794 aa8.83□□□□□ -1
TPM3-201ENST00000271850 LEPRP48357 1165 aaKnown RBP8.83□□□□□ -1
TPM3-201ENST00000271850 CLCNKAP51800 687 aa8.83□□□□□ -1
TPM3-201ENST00000271850 EPHB1P54762 984 aa8.83□□□□□ -1
TPM3-201ENST00000271850 EPHA4P54764 986 aa8.83□□□□□ -1
TPM3-201ENST00000271850 RAB15P59190 212 aa8.83□□□□□ -1
TPM3-201ENST00000271850 RPL26P61254 145 aaKnown RBP8.83□□□□□ -1
TPM3-201ENST00000271850 PPP1CAP62136 330 aa8.83□□□□□ -1
TPM3-201ENST00000271850 IFI16Q16666 785 aaKnown RBP8.83□□□□□ -1
TPM3-201ENST00000271850 ASTE1Q2TB18 679 aaPredicted RBP8.83□□□□□ -1
TPM3-201ENST00000271850 PLA2G4EQ3MJ16 856 aa8.83□□□□□ -1
TPM3-201ENST00000271850 ALS2CLQ60I27 953 aa8.83□□□□□ -1
TPM3-201ENST00000271850 ALKBH5Q6P6C2 394 aaKnown RBP8.83□□□□□ -1
TPM3-201ENST00000271850 NPNTQ6UXI9 565 aa8.83□□□□□ -1
TPM3-201ENST00000271850 C11orf96Q7Z7L8 435 aa8.83□□□□□ -1
TPM3-201ENST00000271850 TMEM135Q86UB9 458 aa8.83□□□□□ -1
TPM3-201ENST00000271850 LUZP1Q86V48 1076 aa8.83□□□□□ -1
TPM3-201ENST00000271850 RAVER1Q8IY67 606 aaKnown RBP8.83□□□□□ -1
TPM3-201ENST00000271850 NLGN4XQ8N0W4 816 aa8.83□□□□□ -1
TPM3-201ENST00000271850 NLGN4YQ8NFZ3 816 aaPredicted RBP8.83□□□□□ -1
TPM3-201ENST00000271850 OR10G6Q8NH81 332 aa8.83□□□□□ -1
TPM3-201ENST00000271850 NSMCE1Q8WV22 266 aa8.83□□□□□ -1
TPM3-201ENST00000271850 RSC1A1Q92681 617 aa8.83□□□□□ -1
TPM3-201ENST00000271850 SYN2Q92777 582 aaPredicted RBP8.83□□□□□ -1
TPM3-201ENST00000271850 OLFM3Q96PB7 478 aa8.83□□□□□ -1
TPM3-201ENST00000271850 GBP4Q96PP9 640 aa8.83□□□□□ -1
TPM3-201ENST00000271850 DPYSL5Q9BPU6 564 aa8.83□□□□□ -1
TPM3-201ENST00000271850 ASPSCR1Q9BZE9 553 aa8.83□□□□□ -1
TPM3-201ENST00000271850 OR2AG1Q9H205 316 aa8.83□□□□□ -1
TPM3-201ENST00000271850 CARD9Q9H257 536 aa8.83□□□□□ -1
TPM3-201ENST00000271850 FAM83DQ9H4H8 585 aa8.83□□□□□ -1
TPM3-201ENST00000271850 CBX8Q9HC52 389 aa8.83□□□□□ -1
TPM3-201ENST00000271850 ZNF71Q9NQZ8 489 aaPredicted RBP8.83□□□□□ -1
TPM3-201ENST00000271850 FBXO8Q9NRD0 319 aa8.83□□□□□ -1
TPM3-201ENST00000271850 CPNE7Q9UBL6 633 aa8.83□□□□□ -1
TPM3-201ENST00000271850 AMACRQ9UHK6 382 aa8.83□□□□□ -1
TPM3-201ENST00000271850 TUBD1Q9UJT1 453 aa8.83□□□□□ -1
TPM3-201ENST00000271850 RPL26L1Q9UNX3 145 aaKnown RBP8.83□□□□□ -1
TPM3-201ENST00000271850 SPO11Q9Y5K1 396 aa8.83□□□□□ -1
TPM3-201ENST00000271850 SPTAN1Q13813 2472 aaKnown RBP8.82□□□□□ -1
TPM3-201ENST00000271850 SMTNL1A8MU46 457 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms