RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 CXorf40BQ96DE9 158 aa12.1□□□□□ -0.47
TRAF4-202ENST00000262396 FUCA2Q9BTY2 467 aa12.1□□□□□ -0.47
TRAF4-202ENST00000262396 TBC1D10AQ9BXI6 508 aa12.1□□□□□ -0.47
TRAF4-202ENST00000262396 BRD8Q9H0E9 1235 aa12.1□□□□□ -0.47
TRAF4-202ENST00000262396 SLC25A18Q9H1K4 315 aa12.1□□□□□ -0.47
TRAF4-202ENST00000262396 DDX56Q9NY93 547 aaKnown RBP12.1□□□□□ -0.47
TRAF4-202ENST00000262396 ATXN10Q9UBB4 475 aa12.1□□□□□ -0.47
TRAF4-202ENST00000262396 TRIM10Q9UDY6 481 aa12.1□□□□□ -0.47
TRAF4-202ENST00000262396 ZNF711Q9Y462 761 aa12.1□□□□□ -0.47
TRAF4-202ENST00000262396 PCDHB3Q9Y5E6 796 aa12.1□□□□□ -0.47
TRAF4-202ENST00000262396 COL27A1Q8IZC6 1860 aaPredicted RBP12.1□□□□□ -0.47
TRAF4-202ENST00000262396 A0A0A6YYK5 440 aaPredicted RBP12.09□□□□□ -0.47
TRAF4-202ENST00000262396 GPR89AB7ZAQ6 455 aa12.09□□□□□ -0.47
TRAF4-202ENST00000262396 PMPCBO75439 489 aa12.09□□□□□ -0.47
TRAF4-202ENST00000262396 CDK14O94921 469 aa12.09□□□□□ -0.47
TRAF4-202ENST00000262396 EML2O95834 649 aa12.09□□□□□ -0.47
TRAF4-202ENST00000262396 GPR89BP0CG08 455 aa12.09□□□□□ -0.47
TRAF4-202ENST00000262396 IDSP22304 550 aa12.09□□□□□ -0.47
TRAF4-202ENST00000262396 ARHGAP25P42331 645 aa12.09□□□□□ -0.47
TRAF4-202ENST00000262396 ARL4DP49703 201 aa12.09□□□□□ -0.47
TRAF4-202ENST00000262396 CSRP3P50461 194 aa12.09□□□□□ -0.47
TRAF4-202ENST00000262396 IFI35P80217 286 aaPredicted RBP12.09□□□□□ -0.47
TRAF4-202ENST00000262396 MC2RQ01718 297 aa12.09□□□□□ -0.47
TRAF4-202ENST00000262396 SLC10A2Q12908 348 aaPredicted RBP12.09□□□□□ -0.47
TRAF4-202ENST00000262396 ZBTB17Q13105 803 aa12.09□□□□□ -0.47
TRAF4-202ENST00000262396 KCNAB2Q13303 367 aa12.09□□□□□ -0.47
TRAF4-202ENST00000262396 CCDC181Q5TID7 509 aa12.09□□□□□ -0.47
TRAF4-202ENST00000262396 KAZNQ674X7 775 aa12.09□□□□□ -0.47
TRAF4-202ENST00000262396 PDPK2PQ6A1A2 396 aa12.09□□□□□ -0.47
TRAF4-202ENST00000262396 CYB5D1Q6P9G0 228 aa12.09□□□□□ -0.47
TRAF4-202ENST00000262396 PTRH1Q86Y79 214 aaKnown RBP12.09□□□□□ -0.47
TRAF4-202ENST00000262396 TRAPPC5Q8IUR0 188 aa12.09□□□□□ -0.47
TRAF4-202ENST00000262396 RHOT1Q8IXI2 618 aa12.09□□□□□ -0.47
TRAF4-202ENST00000262396 GLYATL1Q969I3 302 aa12.09□□□□□ -0.47
TRAF4-202ENST00000262396 FAF2Q96CS3 445 aa12.09□□□□□ -0.47
TRAF4-202ENST00000262396 TGM7Q96PF1 710 aa12.09□□□□□ -0.47
TRAF4-202ENST00000262396 FERMT1Q9BQL6 677 aa12.09□□□□□ -0.47
TRAF4-202ENST00000262396 SLC25A51Q9H1U9 297 aa12.09□□□□□ -0.47
TRAF4-202ENST00000262396 ADNPQ9H2P0 1102 aa12.09□□□□□ -0.47
TRAF4-202ENST00000262396 MAGEE1Q9HCI5 957 aa12.09□□□□□ -0.47
TRAF4-202ENST00000262396 GEMIN8Q9NWZ8 242 aaKnown RBP12.09□□□□□ -0.47
TRAF4-202ENST00000262396 KLHL8Q9P2G9 620 aaPredicted RBP12.09□□□□□ -0.47
TRAF4-202ENST00000262396 IL17BQ9UHF5 180 aa12.09□□□□□ -0.47
TRAF4-202ENST00000262396 CNOT6Q9ULM6 557 aaKnown RBP12.09□□□□□ -0.47
TRAF4-202ENST00000262396 AHCTF1Q8WYP5 2266 aa12.08□□□□□ -0.48
TRAF4-202ENST00000262396 SSU72P8A0A1W2PR75 194 aa12.08□□□□□ -0.48
TRAF4-202ENST00000262396 VEGFDO43915 354 aa12.08□□□□□ -0.48
TRAF4-202ENST00000262396 MTX2O75431 263 aa12.08□□□□□ -0.48
TRAF4-202ENST00000262396 STK17BO94768 372 aa12.08□□□□□ -0.48
TRAF4-202ENST00000262396 UBXN7O94888 489 aa12.08□□□□□ -0.48
TRAF4-202ENST00000262396 NDST3O95803 873 aa12.08□□□□□ -0.48
TRAF4-202ENST00000262396 ZNF7P17097 686 aaPredicted RBP12.08□□□□□ -0.48
TRAF4-202ENST00000262396 WT1P19544 449 aaPredicted RBP12.08□□□□□ -0.48
TRAF4-202ENST00000262396 TCN2P20062 427 aa12.08□□□□□ -0.48
TRAF4-202ENST00000262396 SLC1A1P43005 524 aa12.08□□□□□ -0.48
TRAF4-202ENST00000262396 SEPHS1P49903 392 aa12.08□□□□□ -0.48
TRAF4-202ENST00000262396 POLE2P56282 527 aa12.08□□□□□ -0.48
TRAF4-202ENST00000262396 TFDP2Q14188 446 aa12.08□□□□□ -0.48
TRAF4-202ENST00000262396 PPP2R5EQ16537 467 aa12.08□□□□□ -0.48
TRAF4-202ENST00000262396 IRGCQ6NXR0 463 aa12.08□□□□□ -0.48
TRAF4-202ENST00000262396 NPNTQ6UXI9 565 aa12.08□□□□□ -0.48
TRAF4-202ENST00000262396 B4GALNT4Q76KP1 1039 aa12.08□□□□□ -0.48
TRAF4-202ENST00000262396 CCDC50Q8IVM0 306 aa12.08□□□□□ -0.48
TRAF4-202ENST00000262396 UNC5BQ8IZJ1 945 aa12.08□□□□□ -0.48
TRAF4-202ENST00000262396 ESX1Q8N693 406 aa12.08□□□□□ -0.48
TRAF4-202ENST00000262396 TFB1MQ8WVM0 346 aaKnown RBP12.08□□□□□ -0.48
TRAF4-202ENST00000262396 HTR3CQ8WXA8 447 aa12.08□□□□□ -0.48
TRAF4-202ENST00000262396 RTP4Q96DX8 246 aa12.08□□□□□ -0.48
TRAF4-202ENST00000262396 STAMBPL1Q96FJ0 436 aa12.08□□□□□ -0.48
TRAF4-202ENST00000262396 ZDHHC12Q96GR4 267 aa12.08□□□□□ -0.48
TRAF4-202ENST00000262396 ELMO2Q96JJ3 720 aa12.08□□□□□ -0.48
TRAF4-202ENST00000262396 PLEKHG4BQ96PX9 1271 aa12.08□□□□□ -0.48
TRAF4-202ENST00000262396 ULBP3Q9BZM4 244 aa12.08□□□□□ -0.48
TRAF4-202ENST00000262396 ZCCHC2Q9C0B9 1178 aaKnown RBP12.08□□□□□ -0.48
TRAF4-202ENST00000262396 BPIFA1Q9NP55 256 aa12.08□□□□□ -0.48
TRAF4-202ENST00000262396 FBXO8Q9NRD0 319 aa12.08□□□□□ -0.48
TRAF4-202ENST00000262396 STARD5Q9NSY2 213 aa12.08□□□□□ -0.48
TRAF4-202ENST00000262396 SPTLC3Q9NUV7 552 aa12.08□□□□□ -0.48
TRAF4-202ENST00000262396 UBP1Q9NZI7 540 aa12.08□□□□□ -0.48
TRAF4-202ENST00000262396 HELZ2Q9BYK8 2649 aaKnown RBP12.08□□□□□ -0.48
TRAF4-202ENST00000262396 ARHGEF17Q96PE2 2063 aaPredicted RBP12.07□□□□□ -0.48
TRAF4-202ENST00000262396 LILRA5A6NI73 299 aa12.07□□□□□ -0.48
TRAF4-202ENST00000262396 ARHGAP6O43182 974 aa12.07□□□□□ -0.48
TRAF4-202ENST00000262396 KATNA1O75449 491 aa12.07□□□□□ -0.48
TRAF4-202ENST00000262396 MMP2P08253 660 aa12.07□□□□□ -0.48
TRAF4-202ENST00000262396 CCNYL3P0C7X3 344 aa12.07□□□□□ -0.48
TRAF4-202ENST00000262396 RPL10P27635 214 aaKnown RBP12.07□□□□□ -0.48
TRAF4-202ENST00000262396 DCDC1P59894 354 aa12.07□□□□□ -0.48
TRAF4-202ENST00000262396 ABHD18Q0P651 414 aa12.07□□□□□ -0.48
TRAF4-202ENST00000262396 CLCA4Q14CN2 919 aa12.07□□□□□ -0.48
TRAF4-202ENST00000262396 PLCL1Q15111 1095 aa12.07□□□□□ -0.48
TRAF4-202ENST00000262396 DEFB109BQ30KR1 87 aa12.07□□□□□ -0.48
TRAF4-202ENST00000262396 KLHL35Q6PF15 583 aa12.07□□□□□ -0.48
TRAF4-202ENST00000262396 TMEM26Q6ZUK4 368 aa12.07□□□□□ -0.48
TRAF4-202ENST00000262396 ARHGAP22Q7Z5H3 698 aa12.07□□□□□ -0.48
TRAF4-202ENST00000262396 ADGRG6Q86SQ4 1221 aa12.07□□□□□ -0.48
TRAF4-202ENST00000262396 TTC30BQ8N4P2 665 aa12.07□□□□□ -0.48
TRAF4-202ENST00000262396 SLC25A41Q8N5S1 370 aa12.07□□□□□ -0.48
TRAF4-202ENST00000262396 PLD5Q8N7P1 536 aa12.07□□□□□ -0.48
TRAF4-202ENST00000262396 CNTD1Q8N815 330 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms