RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 RPL7AP62424 266 aaKnown RBP12.91□□□□□ -0.34
TMEM260-201ENST00000261556 CYP4F8P98187 520 aa12.91□□□□□ -0.34
TMEM260-201ENST00000261556 BEX3Q00994 111 aa12.91□□□□□ -0.34
TMEM260-201ENST00000261556 ENPEPQ07075 957 aa12.91□□□□□ -0.34
TMEM260-201ENST00000261556 PPP3CAQ08209 521 aa12.91□□□□□ -0.34
TMEM260-201ENST00000261556 FGFBP1Q14512 234 aa12.91□□□□□ -0.34
TMEM260-201ENST00000261556 CTXN3Q4LDR2 81 aa12.91□□□□□ -0.34
TMEM260-201ENST00000261556 CTRB2Q6GPI1 263 aa12.91□□□□□ -0.34
TMEM260-201ENST00000261556 TIGD7Q6NT04 549 aaPredicted RBP12.91□□□□□ -0.34
TMEM260-201ENST00000261556 KATNAL2Q8IYT4 538 aa12.91□□□□□ -0.34
TMEM260-201ENST00000261556 ADGRF2Q8IZF7 708 aa12.91□□□□□ -0.34
TMEM260-201ENST00000261556 SPATA6LQ8N4H0 392 aa12.91□□□□□ -0.34
TMEM260-201ENST00000261556 ATG16L2Q8NAA4 619 aa12.91□□□□□ -0.34
TMEM260-201ENST00000261556 OR6C4Q8NGE1 309 aa12.91□□□□□ -0.34
TMEM260-201ENST00000261556 PHF21BQ96EK2 531 aa12.91□□□□□ -0.34
TMEM260-201ENST00000261556 SORBS1Q9BX66 1292 aaKnown RBP12.91□□□□□ -0.34
TMEM260-201ENST00000261556 NMRAL1Q9HBL8 299 aa12.91□□□□□ -0.34
TMEM260-201ENST00000261556 SYTL2Q9HCH5 934 aa12.91□□□□□ -0.34
TMEM260-201ENST00000261556 RNF19AQ9NV58 838 aa12.91□□□□□ -0.34
TMEM260-201ENST00000261556 LIMD1Q9UGP4 676 aa12.91□□□□□ -0.34
TMEM260-201ENST00000261556 VPS9D1Q9Y2B5 631 aa12.91□□□□□ -0.34
TMEM260-201ENST00000261556 LRIG2O94898 1065 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 AKT1P31749 480 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 BMPR1AP36894 532 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 KCNC1P48547 511 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 KCNK10P57789 538 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 KLF1Q13351 362 aaPredicted RBP12.9□□□□□ -0.34
TMEM260-201ENST00000261556 SIX1Q15475 284 aaPredicted RBP12.9□□□□□ -0.34
TMEM260-201ENST00000261556 SNAPC1Q16533 368 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 FAM98BQ52LJ0 330 aaKnown RBP12.9□□□□□ -0.34
TMEM260-201ENST00000261556 TMEM126BQ8IUX1 230 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 SGCDQ92629 289 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 TFAP2CQ92754 450 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 RPL10LQ96L21 214 aaKnown RBP12.9□□□□□ -0.34
TMEM260-201ENST00000261556 GTPBP2Q9BX10 602 aaKnown RBP12.9□□□□□ -0.34
TMEM260-201ENST00000261556 BCAS3Q9H6U6 928 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 GPATCH2LQ9NWQ4 482 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 MALT1Q9UDY8 824 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 RIMKLBQ9ULI2 386 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 PRSS44E7EML9 344 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 NDUFS3O75489 264 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 SUPT7LO94864 414 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 TNK2Q07912 1038 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 TDRD10Q5VZ19 366 aaKnown RBP12.9□□□□□ -0.34
TMEM260-201ENST00000261556 DENND1BQ6P3S1 775 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 CXCL17Q6UXB2 119 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 BEND7Q8N7W2 519 aaPredicted RBP12.9□□□□□ -0.34
TMEM260-201ENST00000261556 PPHLN1Q8NEY8 458 aaKnown RBP12.9□□□□□ -0.34
TMEM260-201ENST00000261556 ANGPTL6Q8NI99 470 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 ITFG1Q8TB96 612 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 FANK1Q8TC84 345 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 FBXO32Q969P5 355 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 C12orf10Q9HB07 376 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 SLC13A4Q9UKG4 626 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 NDUFAF1Q9Y375 327 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 CHURC1-FNTBB4DL54 471 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 ZNF197O14709 1029 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 MEIS2O14770 477 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 LRG1P02750 347 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 TFEBP19484 476 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 UBA1P22314 1058 aaKnown RBP12.9□□□□□ -0.34
TMEM260-201ENST00000261556 PTGER2P43116 358 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 CDH8P55286 799 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 METTL4Q8N3J2 472 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 FAM129BQ96TA1 746 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 SEC22CQ9BRL7 303 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 NAT9Q9BTE0 207 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 RNF208Q9H0X6 261 aa12.9□□□□□ -0.34
TMEM260-201ENST00000261556 CNOT11Q9UKZ1 510 aaKnown RBP12.9□□□□□ -0.34
TMEM260-201ENST00000261556 TEX51A0A1B0GUA7 166 aa12.89□□□□□ -0.35
TMEM260-201ENST00000261556 TTLL8A6PVC2 850 aa12.89□□□□□ -0.35
TMEM260-201ENST00000261556 ACKR2O00590 384 aa12.89□□□□□ -0.35
TMEM260-201ENST00000261556 ATG7O95352 703 aa12.89□□□□□ -0.35
TMEM260-201ENST00000261556 PTTG1O95997 202 aa12.89□□□□□ -0.35
TMEM260-201ENST00000261556 RBP1P09455 135 aa12.89□□□□□ -0.35
TMEM260-201ENST00000261556 LEPRP48357 1165 aaKnown RBP12.89□□□□□ -0.35
TMEM260-201ENST00000261556 MXD1Q05195 221 aa12.89□□□□□ -0.35
TMEM260-201ENST00000261556 SCN1BQ07699 218 aa12.89□□□□□ -0.35
TMEM260-201ENST00000261556 DGKZQ13574 1117 aa12.89□□□□□ -0.35
TMEM260-201ENST00000261556 STARD3Q14849 445 aa12.89□□□□□ -0.35
TMEM260-201ENST00000261556 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.89□□□□□ -0.35
TMEM260-201ENST00000261556 CATSPERGQ6ZRH7 1159 aa12.89□□□□□ -0.35
TMEM260-201ENST00000261556 IGDCC3Q8IVU1 814 aa12.89□□□□□ -0.35
TMEM260-201ENST00000261556 PTERQ96BW5 349 aa12.89□□□□□ -0.35
TMEM260-201ENST00000261556 TTYH1Q9H313 450 aaPredicted RBP12.89□□□□□ -0.35
TMEM260-201ENST00000261556 ALG2Q9H553 416 aa12.89□□□□□ -0.35
TMEM260-201ENST00000261556 DHX33Q9H6R0 707 aaKnown RBP12.89□□□□□ -0.35
TMEM260-201ENST00000261556 GMEB2Q9UKD1 530 aa12.89□□□□□ -0.35
TMEM260-201ENST00000261556 TCAF1Q9Y4C2 921 aa12.89□□□□□ -0.35
TMEM260-201ENST00000261556 ASTN1O14525 1302 aa12.89□□□□□ -0.35
TMEM260-201ENST00000261556 E9PAM4 449 aa12.89□□□□□ -0.35
TMEM260-201ENST00000261556 DNTTP04053 509 aa12.89□□□□□ -0.35
TMEM260-201ENST00000261556 MYL9P24844 172 aa12.89□□□□□ -0.35
TMEM260-201ENST00000261556 BST2Q10589 180 aaKnown RBP12.89□□□□□ -0.35
TMEM260-201ENST00000261556 ZNF181Q2M3W8 571 aa12.89□□□□□ -0.35
TMEM260-201ENST00000261556 BCL7AQ4VC05 210 aa12.89□□□□□ -0.35
TMEM260-201ENST00000261556 ARL13AQ5H913 290 aaPredicted RBP12.89□□□□□ -0.35
TMEM260-201ENST00000261556 PRAMEF19Q5SWL8 479 aa12.89□□□□□ -0.35
TMEM260-201ENST00000261556 PYHIN1Q6K0P9 492 aa12.89□□□□□ -0.35
TMEM260-201ENST00000261556 FAM92BQ6ZTR7 304 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms