RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 BACE2Q9Y5Z0 518 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 A0A0U1RQF3 1178 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 MAN2B1O00754 1011 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 NRP2O60462 931 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 CSDE1O75534 798 aaKnown RBP4.29□□□□□ -1.72
VPS13C-202ENST00000261517 SLC25A14O95258 325 aaPredicted RBP4.29□□□□□ -1.72
VPS13C-202ENST00000261517 TNNI3P19429 210 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 EEFSECP57772 596 aaKnown RBP4.29□□□□□ -1.72
VPS13C-202ENST00000261517 DAOAP59103 153 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 SEMA3AQ14563 771 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 ZNF311Q5JNZ3 666 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 RIPOR1Q6ZS17 1223 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 TFAP2DQ7Z6R9 452 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 ECHDC2Q86YB7 292 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 DENND1CQ8IV53 801 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 UNC93B1Q9H1C4 597 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 PADI3Q9ULW8 664 aa4.29□□□□□ -1.72
VPS13C-202ENST00000261517 SNED1Q8TER0 1413 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 EDF1O60869 148 aaKnown RBP4.28□□□□□ -1.72
VPS13C-202ENST00000261517 PSMG1O95456 288 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 F2P00734 622 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 FMO4P31512 558 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 NOVP48745 357 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 TMED10P49755 219 aaKnown RBP4.28□□□□□ -1.72
VPS13C-202ENST00000261517 ACLYP53396 1101 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 DAB2P98082 770 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 ARMC4Q5T2S8 1044 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 RNASEH2BQ5TBB1 312 aaKnown RBP4.28□□□□□ -1.72
VPS13C-202ENST00000261517 MAP1SQ66K74 1059 aaPredicted RBP4.28□□□□□ -1.72
VPS13C-202ENST00000261517 HGSNATQ68CP4 663 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 KLHDC10Q6PID8 442 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 TRPV1Q8NER1 839 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 LNX1Q8TBB1 728 aaPredicted RBP4.28□□□□□ -1.72
VPS13C-202ENST00000261517 KAT5Q92993 513 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 ABTB1Q969K4 478 aaPredicted RBP4.28□□□□□ -1.72
VPS13C-202ENST00000261517 P2RY11Q96G91 374 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 C11orf49Q9H6J7 331 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 LRTM1Q9HBL6 345 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 GEMIN8Q9NWZ8 242 aaKnown RBP4.28□□□□□ -1.72
VPS13C-202ENST00000261517 FAM234BA2RU67 622 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 VSTM5A8MXK1 200 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 FAM189A1O60320 539 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 AK1P00568 194 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 PSME3P61289 254 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 CCDC142Q17RM4 750 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 PAN2Q504Q3 1202 aaKnown RBP4.28□□□□□ -1.72
VPS13C-202ENST00000261517 PLEKHS1Q5SXH7 462 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 PTGR2Q8N8N7 351 aaPredicted RBP4.28□□□□□ -1.72
VPS13C-202ENST00000261517 FAM13CQ8NE31 585 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 OR52K1Q8NGK4 314 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 OR2T34Q8NGX1 318 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 OR2T3Q8NH03 318 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 FNDC11Q9BVV2 318 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 FAM83DQ9H4H8 585 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 KIF13BQ9NQT8 1826 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 C1RP00736 705 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 IGFALSP35858 605 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 CCR8P51685 355 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 SF3B4Q15427 424 aaKnown RBP eCLIP4.28□□□□□ -1.722e-10■■■■□ 19.4
VPS13C-202ENST00000261517 KCNA10Q16322 511 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 XKR6Q5GH73 641 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 DNM1P34Q6PK57 102 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 ZNF621Q6ZSS3 439 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 IFNEQ86WN2 208 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 CPSF7Q8N684 471 aaKnown RBP4.28□□□□□ -1.72
VPS13C-202ENST00000261517 DQX1Q8TE96 717 aaKnown RBP4.28□□□□□ -1.72
VPS13C-202ENST00000261517 C19orf25Q9UFG5 118 aaPredicted RBP4.28□□□□□ -1.72
VPS13C-202ENST00000261517 PTBP2Q9UKA9 531 aaKnown RBP4.28□□□□□ -1.72
VPS13C-202ENST00000261517 SLX4Q8IY92 1834 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 LRRC14BA6NHZ5 514 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 SKAP2O75563 359 aaPredicted RBP4.28□□□□□ -1.72
VPS13C-202ENST00000261517 BCAS2O75934 225 aaPredicted RBP4.28□□□□□ -1.72
VPS13C-202ENST00000261517 GJB1P08034 283 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 DUSP3P51452 185 aaPredicted RBP4.28□□□□□ -1.72
VPS13C-202ENST00000261517 SLC5A3P53794 718 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 RPL19P84098 196 aaKnown RBP4.28□□□□□ -1.72
VPS13C-202ENST00000261517 KLHL22Q53GT1 634 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 PPP1R36Q96LQ0 422 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 SH2D3AQ9BRG2 576 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 PDGFDQ9GZP0 370 aaPredicted RBP4.28□□□□□ -1.72
VPS13C-202ENST00000261517 TMEM5Q9Y2B1 443 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 TELO2Q9Y4R8 837 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 RFXANKO14593 260 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 PDCD5O14737 125 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 PROM1O43490 865 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 PEX1O43933 1283 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 MRPS14O60783 128 aaKnown RBP4.28□□□□□ -1.72
VPS13C-202ENST00000261517 IL1BP01584 269 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 TCF4P15884 667 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 DCKP27707 260 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 LIN54Q6MZP7 749 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 MBOAT1Q6ZNC8 495 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 DCAF4L2Q8NA75 395 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 TMEM27Q9HBJ8 222 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 UPB1Q9UBR1 384 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 HAO1Q9UJM8 370 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 CNTN6Q9UQ52 1028 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 NEMP2A6NFY4 417 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 CD52P31358 61 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 MEF2AQ02078 507 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms