RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 FCGR1AP12314 374 aa16.29■□□□□ 0.2
HOXD3-201ENST00000249440 PKMP14618 531 aaKnown RBP16.29■□□□□ 0.2
HOXD3-201ENST00000249440 LPOP22079 712 aaPredicted RBP16.29■□□□□ 0.2
HOXD3-201ENST00000249440 PSMA3P25788 255 aa16.29■□□□□ 0.2
HOXD3-201ENST00000249440 RGRP47804 291 aa16.29■□□□□ 0.2
HOXD3-201ENST00000249440 SLC11A2P49281 568 aa16.29■□□□□ 0.2
HOXD3-201ENST00000249440 TTPAP49638 278 aa16.29■□□□□ 0.2
HOXD3-201ENST00000249440 SP3Q02447 781 aa16.29■□□□□ 0.2
HOXD3-201ENST00000249440 SMARCB1Q12824 385 aa16.29■□□□□ 0.2
HOXD3-201ENST00000249440 RNF19BQ6ZMZ0 732 aa16.29■□□□□ 0.2
HOXD3-201ENST00000249440 FAM47BQ8NA70 645 aa16.29■□□□□ 0.2
HOXD3-201ENST00000249440 DNAJB14Q8TBM8 379 aa16.29■□□□□ 0.2
HOXD3-201ENST00000249440 FAM110BQ8TC76 370 aa16.29■□□□□ 0.2
HOXD3-201ENST00000249440 TMEM125Q96AQ2 219 aa16.29■□□□□ 0.2
HOXD3-201ENST00000249440 CENPNQ96H22 339 aaPredicted RBP16.29■□□□□ 0.2
HOXD3-201ENST00000249440 TDRD1Q9BXT4 1180 aaKnown RBP16.29■□□□□ 0.2
HOXD3-201ENST00000249440 SCUBE2Q9NQ36 999 aa16.29■□□□□ 0.2
HOXD3-201ENST00000249440 C8orf4Q9NR00 106 aa16.29■□□□□ 0.2
HOXD3-201ENST00000249440 PCTPQ9UKL6 214 aa16.29■□□□□ 0.2
HOXD3-201ENST00000249440 TMCO1Q9UM00 188 aa16.29■□□□□ 0.2
HOXD3-201ENST00000249440 CROCCQ5TZA2 2017 aa16.29■□□□□ 0.2
HOXD3-201ENST00000249440 RNF103-CHMP3A0A140T963 221 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 SNX2O60749 519 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 SLC22A3O75751 556 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 TMCC1O94876 653 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 NELFEP18615 380 aaKnown RBP16.28■□□□□ 0.2
HOXD3-201ENST00000249440 CES1P23141 567 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 ATP5C1P36542 298 aaKnown RBP16.28■□□□□ 0.2
HOXD3-201ENST00000249440 ALDH3B2P48448 385 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 MBTPS1Q14703 1052 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 XKR7Q5GH72 579 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 SYVN1Q86TM6 617 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 PTRH1Q86Y79 214 aaKnown RBP16.28■□□□□ 0.2
HOXD3-201ENST00000249440 ABI1Q8IZP0 508 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 TRPV3Q8NET8 790 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 OR56A4Q8NGH8 313 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 DIS3LQ8TF46 1054 aaKnown RBP16.28■□□□□ 0.2
HOXD3-201ENST00000249440 VPS33AQ96AX1 596 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 EXOC2Q96KP1 924 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 BRINP2Q9C0B6 783 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 DDX18Q9NVP1 670 aaKnown RBP16.28■□□□□ 0.2
HOXD3-201ENST00000249440 RSL24D1Q9UHA3 163 aaKnown RBP16.28■□□□□ 0.2
HOXD3-201ENST00000249440 TRMT6Q9UJA5 497 aaKnown RBP16.28■□□□□ 0.2
HOXD3-201ENST00000249440 DNMT3LQ9UJW3 386 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 KANSL1LA0AUZ9 987 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 FAM149AA5PLN7 773 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 CCDC154A6NI56 674 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 TPST1O60507 370 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 EEDO75530 441 aaKnown RBP16.28■□□□□ 0.2
HOXD3-201ENST00000249440 BAIAP3O94812 1187 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 PRLP01236 227 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 CR2P20023 1033 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 CD9P21926 228 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 PRDX3P30048 256 aaKnown RBP16.28■□□□□ 0.2
HOXD3-201ENST00000249440 IL2P60568 153 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 YBX1P67809 324 aaKnown RBP16.28■□□□□ 0.2
HOXD3-201ENST00000249440 DUSP4Q13115 394 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 RBBP7Q16576 425 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 CYP51A1Q16850 503 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 AASDHQ4L235 1098 aaPredicted RBP16.28■□□□□ 0.2
HOXD3-201ENST00000249440 ARHGAP22Q7Z5H3 698 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 ADGRG5Q8IZF4 528 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 GIPC2Q8TF65 315 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 NSMCE3Q96MG7 304 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 NACA2Q9H009 215 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 RIC8BQ9NVN3 520 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 TMEM161AQ9NX61 479 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 ATXN10Q9UBB4 475 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 SUN2Q9UH99 717 aa16.28■□□□□ 0.2
HOXD3-201ENST00000249440 LEF1Q9UJU2 399 aaPredicted RBP16.28■□□□□ 0.2
HOXD3-201ENST00000249440 PLOD2O00469 737 aa16.27■□□□□ 0.2
HOXD3-201ENST00000249440 CLDN11O75508 207 aa16.27■□□□□ 0.2
HOXD3-201ENST00000249440 TRMUO75648 421 aaKnown RBP16.27■□□□□ 0.2
HOXD3-201ENST00000249440 ALDH2P05091 517 aa16.27■□□□□ 0.2
HOXD3-201ENST00000249440 GSK3BP49841 420 aa16.27■□□□□ 0.2
HOXD3-201ENST00000249440 CDKN1CP49918 316 aaPredicted RBP16.27■□□□□ 0.2
HOXD3-201ENST00000249440 AGTR2P50052 363 aa16.27■□□□□ 0.2
HOXD3-201ENST00000249440 CCT8P50990 548 aa16.27■□□□□ 0.2
HOXD3-201ENST00000249440 RPS6KA3P51812 740 aa16.27■□□□□ 0.2
HOXD3-201ENST00000249440 ERVK-8P63133 956 aa16.27■□□□□ 0.2
HOXD3-201ENST00000249440 MERTKQ12866 999 aa16.27■□□□□ 0.2
HOXD3-201ENST00000249440 IFNEQ86WN2 208 aa16.27■□□□□ 0.2
HOXD3-201ENST00000249440 EPHX4Q8IUS5 362 aa16.27■□□□□ 0.2
HOXD3-201ENST00000249440 FIBCD1Q8N539 461 aa16.27■□□□□ 0.2
HOXD3-201ENST00000249440 ZNF296Q8WUU4 475 aaPredicted RBP16.27■□□□□ 0.2
HOXD3-201ENST00000249440 TEX37Q96LM6 180 aa16.27■□□□□ 0.2
HOXD3-201ENST00000249440 ZNF512Q96ME7 567 aaPredicted RBP16.27■□□□□ 0.2
HOXD3-201ENST00000249440 KCTD14Q9BQ13 255 aaPredicted RBP16.27■□□□□ 0.2
HOXD3-201ENST00000249440 ADI1Q9BV57 179 aa16.27■□□□□ 0.2
HOXD3-201ENST00000249440 ADGRE3Q9BY15 652 aa16.27■□□□□ 0.2
HOXD3-201ENST00000249440 TIMMDC1Q9NPL8 285 aa16.27■□□□□ 0.2
HOXD3-201ENST00000249440 GALPQ9UBC7 116 aa16.27■□□□□ 0.2
HOXD3-201ENST00000249440 ZNF225Q9UK10 706 aa16.27■□□□□ 0.2
HOXD3-201ENST00000249440 PDLIM1O00151 329 aa16.27■□□□□ 0.19
HOXD3-201ENST00000249440 ENPP3O14638 875 aa16.27■□□□□ 0.19
HOXD3-201ENST00000249440 INPP4BO15327 924 aa16.27■□□□□ 0.19
HOXD3-201ENST00000249440 TSPAN12O95859 305 aa16.27■□□□□ 0.19
HOXD3-201ENST00000249440 C7P10643 843 aa16.27■□□□□ 0.19
HOXD3-201ENST00000249440 UMPSP11172 480 aa16.27■□□□□ 0.19
HOXD3-201ENST00000249440 COL6A1P12109 1028 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms