RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 MPP5Q8N3R9 675 aa10.49□□□□□ -0.73
TRPS1-201ENST00000220888 BPIFB6Q8NFQ5 453 aa10.49□□□□□ -0.73
TRPS1-201ENST00000220888 LENG1Q96BZ8 264 aaPredicted RBP10.49□□□□□ -0.73
TRPS1-201ENST00000220888 HAVCR1Q96D42 359 aa10.49□□□□□ -0.73
TRPS1-201ENST00000220888 PDLIM2Q96JY6 352 aa10.49□□□□□ -0.73
TRPS1-201ENST00000220888 PRICKLE1Q96MT3 831 aaPredicted RBP10.49□□□□□ -0.73
TRPS1-201ENST00000220888 NDC1Q9BTX1 674 aa10.49□□□□□ -0.73
TRPS1-201ENST00000220888 ATG10Q9H0Y0 220 aa10.49□□□□□ -0.73
TRPS1-201ENST00000220888 KCNK4Q9NYG8 393 aa10.49□□□□□ -0.73
TRPS1-201ENST00000220888 DAPK2Q9UIK4 370 aa10.49□□□□□ -0.73
TRPS1-201ENST00000220888 RGSL1A5PLK6 1076 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 IQCF5A8MTL0 148 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 FAM25EA8MYX2 175 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 LIASO43766 372 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 PROCP04070 461 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 CYP1A2P05177 515 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 ITGB5P18084 799 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 GRIA3P42263 894 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 PNLIPRP1P54315 467 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 TAF5Q15542 800 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 LDLRAP1Q5SW96 308 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 PIK3C3Q8NEB9 887 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 IRF7Q92985 503 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 SMURF2Q9HAU4 748 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 MRPS30Q9NP92 439 aaKnown RBP10.48□□□□□ -0.73
TRPS1-201ENST00000220888 A0A1W2PRU2 124 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 RIIAD1A6NNX1 92 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 H3BUI4 141 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 SCGNO76038 276 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 PPP2R2BQ00005 443 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 SEMA5AQ13591 1074 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 ABHD15Q6UXT9 468 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 SPATA6LQ8N4H0 392 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 BHLHE22Q8NFJ8 381 aaPredicted RBP10.48□□□□□ -0.73
TRPS1-201ENST00000220888 PIWIL2Q8TC59 973 aaKnown RBP10.48□□□□□ -0.73
TRPS1-201ENST00000220888 ACMSDQ8TDX5 336 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 SGCDQ92629 289 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 KAZALD1Q96I82 304 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 PNO1Q9NRX1 252 aaKnown RBP10.48□□□□□ -0.73
TRPS1-201ENST00000220888 MCUBQ9NWR8 336 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 AK5Q9Y6K8 562 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 A6NCN8 305 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 KMOO15229 486 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 PAPSS1O43252 624 aaPredicted RBP10.48□□□□□ -0.73
TRPS1-201ENST00000220888 ITGAVP06756 1048 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 GRK6P43250 576 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 NRIP1P48552 1158 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 RASGEF1BQ0VAM2 473 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 RNASEH2BQ5TBB1 312 aaKnown RBP10.48□□□□□ -0.73
TRPS1-201ENST00000220888 SLC30A6Q6NXT4 461 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 WDR93Q6P2C0 686 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 BBS12Q6ZW61 710 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 AMZ2Q86W34 360 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 GKN2Q86XP6 184 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 OR2L5Q8NG80 312 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 DQX1Q8TE96 717 aaKnown RBP10.48□□□□□ -0.73
TRPS1-201ENST00000220888 DENND1AQ8TEH3 1009 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 STYXQ8WUJ0 223 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 P2RY11Q96G91 374 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 RPL10LQ96L21 214 aaKnown RBP10.48□□□□□ -0.73
TRPS1-201ENST00000220888 MMADHCQ9H3L0 296 aaPredicted RBP10.48□□□□□ -0.73
TRPS1-201ENST00000220888 NKIRAS2Q9NYR9 191 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 ZNF726A6NNF4 738 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 AKAP8O43823 692 aaKnown RBP10.48□□□□□ -0.73
TRPS1-201ENST00000220888 B4GALT4O60513 344 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 AOC2O75106 756 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 SERPINA3P01011 423 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 CST1P01037 141 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 AHCYP23526 432 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 ITGA3P26006 1051 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 PPP3R1P63098 170 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 GRIK5Q16478 980 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 MAPK14Q16539 360 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 UGCGQ16739 394 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 PTCHD4Q6ZW05 846 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 RANBP3LQ86VV4 465 aaPredicted RBP10.48□□□□□ -0.73
TRPS1-201ENST00000220888 TREML1Q86YW5 311 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 FAM71AQ8IYT1 594 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 CELF5Q8N6W0 485 aaKnown RBP10.48□□□□□ -0.73
TRPS1-201ENST00000220888 PLA2G15Q8NCC3 412 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 OR7D4Q8NG98 312 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 SETD6Q8TBK2 473 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 INPP4AQ96PE3 977 aaPredicted RBP10.48□□□□□ -0.73
TRPS1-201ENST00000220888 GSDMCQ9BYG8 508 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 LHX5Q9H2C1 402 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 SPAG4Q9NPE6 437 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 CIDEBQ9UHD4 219 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 NWD1Q149M9 1564 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 SETBP1Q9Y6X0 1596 aa10.48□□□□□ -0.73
TRPS1-201ENST00000220888 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.47□□□□□ -0.73
TRPS1-201ENST00000220888 SSNA1O43805 119 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 ITGA2BP08514 1039 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 ADH5P11766 374 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 TSHRP16473 764 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 DDX6P26196 483 aaKnown RBP eCLIP10.47□□□□□ -0.73
TRPS1-201ENST00000220888 SLC26A3P40879 764 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 CCNFP41002 786 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 DLG2Q15700 870 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 LIPMQ5VYY2 423 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 TMPRSS11AQ6ZMR5 421 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms