RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 SUSD2Q9UGT4 822 aa26.97■■□□□ 1.91
CHMP4B-201ENST00000217402 A0A1B0GTW7 788 aa26.96■■□□□ 1.91
CHMP4B-201ENST00000217402 TMEM202A6NGA9 273 aa26.96■■□□□ 1.91
CHMP4B-201ENST00000217402 TOR1BO14657 336 aa26.96■■□□□ 1.91
CHMP4B-201ENST00000217402 OR1I1O60431 355 aa26.96■■□□□ 1.91
CHMP4B-201ENST00000217402 NDUFS3O75489 264 aa26.96■■□□□ 1.91
CHMP4B-201ENST00000217402 ABHD2P08910 425 aa26.96■■□□□ 1.91
CHMP4B-201ENST00000217402 MSH3P20585 1137 aa26.96■■□□□ 1.91
CHMP4B-201ENST00000217402 HTR1BP28222 390 aa26.96■■□□□ 1.91
CHMP4B-201ENST00000217402 POLD2P49005 469 aa26.96■■□□□ 1.91
CHMP4B-201ENST00000217402 LYPLAL1Q5VWZ2 237 aa26.96■■□□□ 1.91
CHMP4B-201ENST00000217402 DET1Q7L5Y6 550 aa26.96■■□□□ 1.91
CHMP4B-201ENST00000217402 FAM174AQ8TBP5 190 aa26.96■■□□□ 1.91
CHMP4B-201ENST00000217402 DCUN1D1Q96GG9 259 aa26.96■■□□□ 1.91
CHMP4B-201ENST00000217402 ACSS3Q9H6R3 686 aa26.96■■□□□ 1.91
CHMP4B-201ENST00000217402 PSAT1Q9Y617 370 aa26.96■■□□□ 1.91
CHMP4B-201ENST00000217402 HOXC4P09017 264 aaPredicted RBP26.95■■□□□ 1.91
CHMP4B-201ENST00000217402 PPARGP37231 505 aaPredicted RBP26.95■■□□□ 1.91
CHMP4B-201ENST00000217402 B4GALNT1Q00973 533 aa26.95■■□□□ 1.91
CHMP4B-201ENST00000217402 ZNF789Q5FWF6 425 aa26.95■■□□□ 1.91
CHMP4B-201ENST00000217402 ZNF449Q6P9G9 518 aa26.95■■□□□ 1.91
CHMP4B-201ENST00000217402 MARK2Q7KZI7 788 aaKnown RBP26.95■■□□□ 1.91
CHMP4B-201ENST00000217402 ADGRG6Q86SQ4 1221 aa26.95■■□□□ 1.91
CHMP4B-201ENST00000217402 IQCHQ86VS3 1027 aa26.95■■□□□ 1.91
CHMP4B-201ENST00000217402 PPM1NQ8N819 430 aa26.95■■□□□ 1.91
CHMP4B-201ENST00000217402 C2CD4AQ8NCU7 369 aaPredicted RBP26.95■■□□□ 1.91
CHMP4B-201ENST00000217402 MRRFQ96E11 262 aaKnown RBP26.95■■□□□ 1.91
CHMP4B-201ENST00000217402 WDR92Q96MX6 357 aa26.95■■□□□ 1.91
CHMP4B-201ENST00000217402 CYTH2Q99418 400 aa26.95■■□□□ 1.91
CHMP4B-201ENST00000217402 TRIM39Q9HCM9 518 aa26.95■■□□□ 1.91
CHMP4B-201ENST00000217402 ATXN10Q9UBB4 475 aa26.95■■□□□ 1.91
CHMP4B-201ENST00000217402 UBA6A0AVT1 1052 aaPredicted RBP26.94■■□□□ 1.9
CHMP4B-201ENST00000217402 PRR5-ARHGAP8B1AHC4 643 aa26.94■■□□□ 1.9
CHMP4B-201ENST00000217402 TLR4O00206 839 aa26.94■■□□□ 1.9
CHMP4B-201ENST00000217402 ABCG1P45844 678 aa26.94■■□□□ 1.9
CHMP4B-201ENST00000217402 C21orf59P57076 290 aa26.94■■□□□ 1.9
CHMP4B-201ENST00000217402 TMEM115Q12893 351 aaPredicted RBP26.94■■□□□ 1.9
CHMP4B-201ENST00000217402 TEAD4Q15561 434 aa26.94■■□□□ 1.9
CHMP4B-201ENST00000217402 ENPP7Q6UWV6 458 aa26.94■■□□□ 1.9
CHMP4B-201ENST00000217402 RBFAQ8N0V3 343 aa26.94■■□□□ 1.9
CHMP4B-201ENST00000217402 FUT8Q9BYC5 575 aa26.94■■□□□ 1.9
CHMP4B-201ENST00000217402 GPR27Q9NS67 375 aa26.94■■□□□ 1.9
CHMP4B-201ENST00000217402 MOSPD1Q9UJG1 213 aa26.94■■□□□ 1.9
CHMP4B-201ENST00000217402 IGLV3-16A0A075B6K0 115 aa26.94■■□□□ 1.9
CHMP4B-201ENST00000217402 CFAP99D6REC4 459 aa26.94■■□□□ 1.9
CHMP4B-201ENST00000217402 EPN2O95208 641 aa26.94■■□□□ 1.9
CHMP4B-201ENST00000217402 S1PR4O95977 384 aa26.94■■□□□ 1.9
CHMP4B-201ENST00000217402 RALBP11234 206 aa26.94■■□□□ 1.9
CHMP4B-201ENST00000217402 OVGP1Q12889 678 aa26.94■■□□□ 1.9
CHMP4B-201ENST00000217402 ITIH4Q14624 930 aa26.94■■□□□ 1.9
CHMP4B-201ENST00000217402 RNF187Q5TA31 235 aaPredicted RBP26.94■■□□□ 1.9
CHMP4B-201ENST00000217402 PEAR1Q5VY43 1037 aaPredicted RBP26.94■■□□□ 1.9
CHMP4B-201ENST00000217402 KCTD16Q68DU8 428 aa26.94■■□□□ 1.9
CHMP4B-201ENST00000217402 MACC1Q6ZN28 852 aa26.94■■□□□ 1.9
CHMP4B-201ENST00000217402 CLDN19Q8N6F1 224 aa26.94■■□□□ 1.9
CHMP4B-201ENST00000217402 OR56A4Q8NGH8 313 aa26.94■■□□□ 1.9
CHMP4B-201ENST00000217402 TCF12Q99081 682 aa26.94■■□□□ 1.9
CHMP4B-201ENST00000217402 ZCCHC2Q9C0B9 1178 aaKnown RBP26.94■■□□□ 1.9
CHMP4B-201ENST00000217402 FGF22Q9HCT0 170 aa26.94■■□□□ 1.9
CHMP4B-201ENST00000217402 MRPL40Q9NQ50 206 aaKnown RBP26.94■■□□□ 1.9
CHMP4B-201ENST00000217402 CRYL1Q9Y2S2 319 aa26.94■■□□□ 1.9
CHMP4B-201ENST00000217402 A0A1B0GVT2 93 aa26.93■■□□□ 1.9
CHMP4B-201ENST00000217402 VILLO15195 856 aa26.93■■□□□ 1.9
CHMP4B-201ENST00000217402 PFDN6O15212 129 aa26.93■■□□□ 1.9
CHMP4B-201ENST00000217402 CDK14O94921 469 aa26.93■■□□□ 1.9
CHMP4B-201ENST00000217402 CFIP05156 583 aa26.93■■□□□ 1.9
CHMP4B-201ENST00000217402 ZNF8P17098 575 aaPredicted RBP26.93■■□□□ 1.9
CHMP4B-201ENST00000217402 KELP23276 732 aa26.93■■□□□ 1.9
CHMP4B-201ENST00000217402 PTK2BQ14289 1009 aa26.93■■□□□ 1.9
CHMP4B-201ENST00000217402 KIAA0408Q6ZU52 694 aa26.93■■□□□ 1.9
CHMP4B-201ENST00000217402 STRA8Q7Z7C7 330 aa26.93■■□□□ 1.9
CHMP4B-201ENST00000217402 MREGQ8N565 214 aa26.93■■□□□ 1.9
CHMP4B-201ENST00000217402 RASGEF1AQ8N9B8 481 aa26.93■■□□□ 1.9
CHMP4B-201ENST00000217402 LPGAT1Q92604 370 aa26.93■■□□□ 1.9
CHMP4B-201ENST00000217402 SKA1Q96BD8 255 aa26.93■■□□□ 1.9
CHMP4B-201ENST00000217402 LOXL4Q96JB6 756 aa26.93■■□□□ 1.9
CHMP4B-201ENST00000217402 IRF2BPLQ9H1B7 796 aa26.93■■□□□ 1.9
CHMP4B-201ENST00000217402 ARRDC1-AS1Q9H2J1 176 aa26.93■■□□□ 1.9
CHMP4B-201ENST00000217402 INTS10Q9NVR2 710 aaKnown RBP26.93■■□□□ 1.9
CHMP4B-201ENST00000217402 SPTY2D1-AS1A0A0U1RR47 76 aa26.92■■□□□ 1.9
CHMP4B-201ENST00000217402 OR2AG2A6NM03 316 aa26.92■■□□□ 1.9
CHMP4B-201ENST00000217402 HAUS5O94927 633 aa26.92■■□□□ 1.9
CHMP4B-201ENST00000217402 CEACAM5P06731 702 aa26.92■■□□□ 1.9
CHMP4B-201ENST00000217402 ZNF7P17097 686 aaPredicted RBP26.92■■□□□ 1.9
CHMP4B-201ENST00000217402 HOXD12P35452 270 aa26.92■■□□□ 1.9
CHMP4B-201ENST00000217402 DPP6P42658 865 aa26.92■■□□□ 1.9
CHMP4B-201ENST00000217402 NSG1P42857 185 aa26.92■■□□□ 1.9
CHMP4B-201ENST00000217402 EIF3BP55884 814 aaKnown RBP26.92■■□□□ 1.9
CHMP4B-201ENST00000217402 GTF2H3Q13889 308 aa26.92■■□□□ 1.9
CHMP4B-201ENST00000217402 FZD2Q14332 565 aa26.92■■□□□ 1.9
CHMP4B-201ENST00000217402 CCDC6Q16204 474 aa26.92■■□□□ 1.9
CHMP4B-201ENST00000217402 CNSTQ6PJW8 725 aa26.92■■□□□ 1.9
CHMP4B-201ENST00000217402 PACS1Q6VY07 963 aa26.92■■□□□ 1.9
CHMP4B-201ENST00000217402 SLC26A11Q86WA9 606 aa26.92■■□□□ 1.9
CHMP4B-201ENST00000217402 SPATS2Q86XZ4 545 aaKnown RBP26.92■■□□□ 1.9
CHMP4B-201ENST00000217402 HEXDCQ8WVB3 486 aa26.92■■□□□ 1.9
CHMP4B-201ENST00000217402 SGF29Q96ES7 293 aa26.92■■□□□ 1.9
CHMP4B-201ENST00000217402 PDXPQ96GD0 296 aa26.92■■□□□ 1.9
CHMP4B-201ENST00000217402 CLPBQ9H078 707 aa26.92■■□□□ 1.9
CHMP4B-201ENST00000217402 VPS18Q9P253 973 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms