RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 ABRAXAS1Q6UWZ7 409 aa15.67■□□□□ 0.1
ERCC1-201ENST00000013807 CEACAM20Q6UY09 585 aa15.67■□□□□ 0.1
ERCC1-201ENST00000013807 WASH2PQ6VEQ5 465 aa15.67■□□□□ 0.1
ERCC1-201ENST00000013807 PLXDC1Q8IUK5 500 aa15.67■□□□□ 0.1
ERCC1-201ENST00000013807 PHYKPLQ8IUZ5 450 aa15.67■□□□□ 0.1
ERCC1-201ENST00000013807 IL22RA1Q8N6P7 574 aa15.67■□□□□ 0.1
ERCC1-201ENST00000013807 GLYATL1Q969I3 302 aa15.67■□□□□ 0.1
ERCC1-201ENST00000013807 TEKT5Q96M29 485 aa15.67■□□□□ 0.1
ERCC1-201ENST00000013807 PLEKHG4BQ96PX9 1271 aa15.67■□□□□ 0.1
ERCC1-201ENST00000013807 VPS35Q96QK1 796 aa15.67■□□□□ 0.1
ERCC1-201ENST00000013807 MAK16Q9BXY0 300 aaKnown RBP15.67■□□□□ 0.1
ERCC1-201ENST00000013807 DEF6Q9H4E7 631 aa15.67■□□□□ 0.1
ERCC1-201ENST00000013807 WASH6PQ9NQA3 447 aa15.67■□□□□ 0.1
ERCC1-201ENST00000013807 ZNHIT6Q9NWK9 470 aaKnown RBP15.67■□□□□ 0.1
ERCC1-201ENST00000013807 DDX56Q9NY93 547 aaKnown RBP15.67■□□□□ 0.1
ERCC1-201ENST00000013807 PTPN13Q12923 2485 aa15.67■□□□□ 0.1
ERCC1-201ENST00000013807 LOC285095A0A1B0GVY8 99 aa15.66■□□□□ 0.1
ERCC1-201ENST00000013807 KMOO15229 486 aa15.66■□□□□ 0.1
ERCC1-201ENST00000013807 TOX3O15405 576 aaPredicted RBP15.66■□□□□ 0.1
ERCC1-201ENST00000013807 SUV39H1O43463 412 aa15.66■□□□□ 0.1
ERCC1-201ENST00000013807 SLC28A2O43868 658 aa15.66■□□□□ 0.1
ERCC1-201ENST00000013807 NDST3O95803 873 aa15.66■□□□□ 0.1
ERCC1-201ENST00000013807 FAM87AP0C7U9 286 aa15.66■□□□□ 0.1
ERCC1-201ENST00000013807 LIFP15018 202 aa15.66■□□□□ 0.1
ERCC1-201ENST00000013807 MAP4P27816 1152 aaKnown RBP15.66■□□□□ 0.1
ERCC1-201ENST00000013807 HMGCLP35914 325 aa15.66■□□□□ 0.1
ERCC1-201ENST00000013807 HADHBP55084 474 aaKnown RBP15.66■□□□□ 0.1
ERCC1-201ENST00000013807 CYP4F2P78329 520 aa15.66■□□□□ 0.1
ERCC1-201ENST00000013807 NFATC3Q12968 1075 aa15.66■□□□□ 0.1
ERCC1-201ENST00000013807 ZNF569Q5MCW4 686 aa15.66■□□□□ 0.1
ERCC1-201ENST00000013807 BZW1Q7L1Q6 419 aaKnown RBP15.66■□□□□ 0.1
ERCC1-201ENST00000013807 VSTM4Q8IW00 320 aa15.66■□□□□ 0.1
ERCC1-201ENST00000013807 RHOT1Q8IXI2 618 aa15.66■□□□□ 0.1
ERCC1-201ENST00000013807 CACNA2D3Q8IZS8 1091 aa15.66■□□□□ 0.1
ERCC1-201ENST00000013807 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.66■□□□□ 0.1
ERCC1-201ENST00000013807 NCSTNQ92542 709 aa15.66■□□□□ 0.1
ERCC1-201ENST00000013807 SLC45A3Q96JT2 553 aa15.66■□□□□ 0.1
ERCC1-201ENST00000013807 CCDC42Q96M95 316 aa15.66■□□□□ 0.1
ERCC1-201ENST00000013807 AGAP3Q96P47 875 aa15.66■□□□□ 0.1
ERCC1-201ENST00000013807 TIMM29Q9BSF4 260 aa15.66■□□□□ 0.1
ERCC1-201ENST00000013807 SPATA16Q9BXB7 569 aa15.66■□□□□ 0.1
ERCC1-201ENST00000013807 OR2AG1Q9H205 316 aa15.66■□□□□ 0.1
ERCC1-201ENST00000013807 NHEJ1Q9H9Q4 299 aaPredicted RBP15.66■□□□□ 0.1
ERCC1-201ENST00000013807 GLOD4Q9HC38 313 aa15.66■□□□□ 0.1
ERCC1-201ENST00000013807 PRDM8Q9NQV8 689 aa15.66■□□□□ 0.1
ERCC1-201ENST00000013807 WDR70Q9NW82 654 aa15.66■□□□□ 0.1
ERCC1-201ENST00000013807 SIDT1Q9NXL6 827 aaKnown RBP15.66■□□□□ 0.1
ERCC1-201ENST00000013807 SLC23A2Q9UGH3 650 aa15.66■□□□□ 0.1
ERCC1-201ENST00000013807 TUBD1Q9UJT1 453 aa15.66■□□□□ 0.1
ERCC1-201ENST00000013807 ZNF711Q9Y462 761 aa15.66■□□□□ 0.1
ERCC1-201ENST00000013807 NBASA2RRP1 2371 aa15.66■□□□□ 0.1
ERCC1-201ENST00000013807 TERTO14746 1132 aaKnown RBP15.65■□□□□ 0.1
ERCC1-201ENST00000013807 RAD1O60671 282 aa15.65■□□□□ 0.1
ERCC1-201ENST00000013807 WISP1O95388 367 aa15.65■□□□□ 0.1
ERCC1-201ENST00000013807 BPIP17213 487 aa15.65■□□□□ 0.1
ERCC1-201ENST00000013807 PTPN3P26045 913 aa15.65■□□□□ 0.1
ERCC1-201ENST00000013807 CDKN2BP42772 138 aa15.65■□□□□ 0.1
ERCC1-201ENST00000013807 NFATC2Q13469 925 aa15.65■□□□□ 0.1
ERCC1-201ENST00000013807 MAP7Q14244 749 aa15.65■□□□□ 0.1
ERCC1-201ENST00000013807 CLCA4Q14CN2 919 aa15.65■□□□□ 0.1
ERCC1-201ENST00000013807 PRKD1Q15139 912 aaPredicted RBP15.65■□□□□ 0.1
ERCC1-201ENST00000013807 AGAP9Q5VTM2 703 aa15.65■□□□□ 0.1
ERCC1-201ENST00000013807 NPNTQ6UXI9 565 aa15.65■□□□□ 0.1
ERCC1-201ENST00000013807 TMEM26Q6ZUK4 368 aa15.65■□□□□ 0.1
ERCC1-201ENST00000013807 C11orf96Q7Z7L8 435 aa15.65■□□□□ 0.1
ERCC1-201ENST00000013807 LRRTM4Q86VH4 590 aa15.65■□□□□ 0.1
ERCC1-201ENST00000013807 FAM129CQ86XR2 697 aa15.65■□□□□ 0.1
ERCC1-201ENST00000013807 ZNF547Q8IVP9 402 aa15.65■□□□□ 0.1
ERCC1-201ENST00000013807 NLGN4XQ8N0W4 816 aa15.65■□□□□ 0.1
ERCC1-201ENST00000013807 NLGN4YQ8NFZ3 816 aaPredicted RBP15.65■□□□□ 0.1
ERCC1-201ENST00000013807 JPH3Q8WXH2 748 aaPredicted RBP15.65■□□□□ 0.1
ERCC1-201ENST00000013807 CATSPER2Q96P56 530 aa15.65■□□□□ 0.1
ERCC1-201ENST00000013807 EFHD1Q9BUP0 239 aa15.65■□□□□ 0.1
ERCC1-201ENST00000013807 FAM117AQ9C073 453 aa15.65■□□□□ 0.1
ERCC1-201ENST00000013807 SLC25A18Q9H1K4 315 aa15.65■□□□□ 0.1
ERCC1-201ENST00000013807 TRIT1Q9H3H1 467 aaKnown RBP15.65■□□□□ 0.1
ERCC1-201ENST00000013807 TRABDQ9H4I3 376 aa15.65■□□□□ 0.1
ERCC1-201ENST00000013807 KLC4Q9NSK0 619 aa15.65■□□□□ 0.1
ERCC1-201ENST00000013807 OGFRQ9NZT2 677 aa15.65■□□□□ 0.1
ERCC1-201ENST00000013807 ZNF624Q9P2J8 865 aaPredicted RBP15.65■□□□□ 0.1
ERCC1-201ENST00000013807 TMPRSS11EQ9UL52 423 aa15.65■□□□□ 0.1
ERCC1-201ENST00000013807 SHOC2Q9UQ13 582 aa15.65■□□□□ 0.1
ERCC1-201ENST00000013807 A0A0A6YYK5 440 aaPredicted RBP15.64■□□□□ 0.09
ERCC1-201ENST00000013807 ZNF891A8MT65 544 aaPredicted RBP15.64■□□□□ 0.09
ERCC1-201ENST00000013807 MTSS1O43312 755 aa15.64■□□□□ 0.09
ERCC1-201ENST00000013807 KCNJ13O60928 360 aa15.64■□□□□ 0.09
ERCC1-201ENST00000013807 MFAP3LO75121 409 aa15.64■□□□□ 0.09
ERCC1-201ENST00000013807 MT-CYBP00156 380 aaPredicted RBP15.64■□□□□ 0.09
ERCC1-201ENST00000013807 PIRTP0C851 137 aa15.64■□□□□ 0.09
ERCC1-201ENST00000013807 ZNF7P17097 686 aaPredicted RBP15.64■□□□□ 0.09
ERCC1-201ENST00000013807 SLC19A1P41440 591 aa15.64■□□□□ 0.09
ERCC1-201ENST00000013807 CSRP3P50461 194 aa15.64■□□□□ 0.09
ERCC1-201ENST00000013807 KCNC4Q03721 635 aa15.64■□□□□ 0.09
ERCC1-201ENST00000013807 ABHD18Q0P651 414 aa15.64■□□□□ 0.09
ERCC1-201ENST00000013807 WASHC5Q12768 1159 aa15.64■□□□□ 0.09
ERCC1-201ENST00000013807 TFDP2Q14188 446 aa15.64■□□□□ 0.09
ERCC1-201ENST00000013807 CCDC70Q6NSX1 233 aa15.64■□□□□ 0.09
ERCC1-201ENST00000013807 BORAQ6PGQ7 559 aa15.64■□□□□ 0.09
ERCC1-201ENST00000013807 MFSD7Q6UXD7 560 aa15.64■□□□□ 0.09
ERCC1-201ENST00000013807 TIPARPQ7Z3E1 657 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms