RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 C17orf102A2RUQ5 167 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 AXIN1O15169 862 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 NOBOXO60393 691 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 POLR2JP52435 117 aaKnown RBP13.92□□□□□ -0.18
USH1C-201ENST00000005226 LCP2Q13094 533 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 RBBP7Q16576 425 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 DDR2Q16832 855 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 CCNYL2Q5T2Q4 361 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 USP51Q70EK9 711 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 MIB1Q86YT6 1006 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 CDYL2Q8N8U2 506 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 PDZD8Q8NEN9 1154 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 TMBIM1Q969X1 311 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 CD320Q9NPF0 282 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 INIPQ9NRY2 104 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 PCDHGA11Q9Y5H2 935 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 FUOMA2VDF0 154 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 ZNF701M0R085 212 aaPredicted RBP13.92□□□□□ -0.18
USH1C-201ENST00000005226 MAN1A2O60476 641 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 TSPAN3O60637 253 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 SNAP91O60641 907 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 PAPSS2O95340 614 aaPredicted RBP13.92□□□□□ -0.18
USH1C-201ENST00000005226 CCNA2P20248 432 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 HLCSP50747 726 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 RELAQ04206 551 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 NR1D2Q14995 579 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 C18orf21Q32NC0 220 aaPredicted RBP13.92□□□□□ -0.18
USH1C-201ENST00000005226 RAP1GAP2Q684P5 730 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 CD300LGQ6UXG3 332 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 PIWIL3Q7Z3Z3 882 aaKnown RBP13.92□□□□□ -0.18
USH1C-201ENST00000005226 BTLAQ7Z6A9 289 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 SNX29P2Q8IUI4 249 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 TBC1D21Q8IYX1 336 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 CLEC4FQ8N1N0 589 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 ZBTB8BQ8NAP8 495 aaPredicted RBP13.92□□□□□ -0.18
USH1C-201ENST00000005226 GABPB2Q8TAK5 448 aaPredicted RBP13.92□□□□□ -0.18
USH1C-201ENST00000005226 ACBD6Q9BR61 282 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 TRIM54Q9BYV2 358 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 ING2Q9H160 280 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 CARS2Q9HA77 564 aaKnown RBP13.92□□□□□ -0.18
USH1C-201ENST00000005226 AIG1Q9NVV5 245 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 MED16Q9Y2X0 877 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 PLXNB2O15031 1838 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 OR4F21O95013 312 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 ODC1P11926 461 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 EFEMP1Q12805 493 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 RCAN2Q14206 197 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 CCL14Q16627 93 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 ANKS6Q68DC2 871 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 METTL23Q86XA0 190 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 OR13F1Q8NGS4 319 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 OR4L1Q8NH43 312 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 ZNF420Q8TAQ5 688 aaPredicted RBP13.92□□□□□ -0.18
USH1C-201ENST00000005226 HGH1Q9BTY7 390 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 INTS10Q9NVR2 710 aaKnown RBP13.92□□□□□ -0.18
USH1C-201ENST00000005226 TBCCD1Q9NVR7 557 aa13.92□□□□□ -0.18
USH1C-201ENST00000005226 ABI2Q9NYB9 513 aaPredicted RBP13.92□□□□□ -0.18
USH1C-201ENST00000005226 KANSL1LA0AUZ9 987 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 UPK1AO00322 258 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 BTN3A1O00481 513 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 XYLBO75191 536 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 FAM163BP0C2L3 166 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 NFKBIAP25963 317 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 RXRGP48443 463 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 CD97P48960 835 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 MS4A13Q5J8X5 152 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 XAF1Q6GPH4 301 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 OVOS1Q6IE37 1185 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 R3HCC1LQ7Z5L2 792 aaKnown RBP13.91□□□□□ -0.18
USH1C-201ENST00000005226 ZNF467Q7Z7K2 595 aaPredicted RBP13.91□□□□□ -0.18
USH1C-201ENST00000005226 TMEM199Q8N511 208 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 DTWD1Q8N5C7 304 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 FNDC5Q8NAU1 212 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 SLC22A17Q8WUG5 538 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 PKMYT1Q99640 499 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 GPR21Q99679 349 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 AARSD1Q9BTE6 412 aaKnown RBP13.91□□□□□ -0.18
USH1C-201ENST00000005226 DGCR6LQ9BY27 220 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 CATSPERZQ9NTU4 200 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 HACD3Q9P035 362 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 RGS17Q9UGC6 210 aaPredicted RBP13.91□□□□□ -0.18
USH1C-201ENST00000005226 CCL15-CCL14A0A0B4J2E2 113 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 TNFRSF10BO14763 440 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 SNX2O60749 519 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 FCGR1AP12314 374 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 GGT5P36269 586 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 SLC26A3P40879 764 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 GRB14Q14449 540 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 CCL15Q16663 113 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 MEP1AQ16819 746 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 EGFLAMQ63HQ2 1017 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 MRNIPQ6NTE8 343 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 SPATA2LQ8IUW3 424 aaPredicted RBP13.91□□□□□ -0.18
USH1C-201ENST00000005226 OR52B6Q8NGF0 335 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 PROKR1Q8TCW9 393 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 NSMCE2Q96MF7 247 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 NSMCE3Q96MG7 304 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 ZNF599Q96NL3 588 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 TSPAN18Q96SJ8 248 aa13.91□□□□□ -0.18
USH1C-201ENST00000005226 EIF2B4Q9UI10 523 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms