RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Slc22a15Q504N2 544 aa18.2■□□□□ 0.5
Trim47-202ENSMUST00000106441 Cd6Q61003 665 aa18.2■□□□□ 0.5
Trim47-202ENSMUST00000106441 Casd1Q7TN73 797 aa18.2■□□□□ 0.5
Trim47-202ENSMUST00000106441 TpbglQ8C013 384 aa18.2■□□□□ 0.5
Trim47-202ENSMUST00000106441 Mfsd14bQ8CIA9 507 aa18.2■□□□□ 0.5
Trim47-202ENSMUST00000106441 Olfr695Q8VFM3 315 aa18.2■□□□□ 0.5
Trim47-202ENSMUST00000106441 Pmf1Q9CPV5 202 aa18.2■□□□□ 0.5
Trim47-202ENSMUST00000106441 Lyrm1Q9CQB7 122 aa18.2■□□□□ 0.5
Trim47-202ENSMUST00000106441 Hddc3Q9D114 179 aa18.2■□□□□ 0.5
Trim47-202ENSMUST00000106441 Fam162aQ9D6U8 155 aa18.2■□□□□ 0.5
Trim47-202ENSMUST00000106441 Akap8lQ9R0L7 642 aaKnown RBP18.2■□□□□ 0.5
Trim47-202ENSMUST00000106441 Ccdc194A0A140LIT1 234 aa18.2■□□□□ 0.5
Trim47-202ENSMUST00000106441 F830016B08RikG3UWE2 416 aa18.2■□□□□ 0.5
Trim47-202ENSMUST00000106441 Cdh9P70407 786 aa18.2■□□□□ 0.5
Trim47-202ENSMUST00000106441 Dyrk2Q5U4C9 599 aa18.2■□□□□ 0.5
Trim47-202ENSMUST00000106441 Cdc14bQ6PFY9 485 aa18.2■□□□□ 0.5
Trim47-202ENSMUST00000106441 Kcng4Q80XM3 506 aa18.2■□□□□ 0.5
Trim47-202ENSMUST00000106441 CtbsQ8R242 366 aa18.2■□□□□ 0.5
Trim47-202ENSMUST00000106441 Ptbp2Q91Z31 531 aaKnown RBP18.2■□□□□ 0.5
Trim47-202ENSMUST00000106441 Ak5Q920P5 562 aa18.2■□□□□ 0.5
Trim47-202ENSMUST00000106441 Q9D454 513 aa18.2■□□□□ 0.5
Trim47-202ENSMUST00000106441 Oaz3Q9R109 243 aa18.2■□□□□ 0.5
Trim47-202ENSMUST00000106441 Cib1Q9Z0F4 191 aa18.2■□□□□ 0.5
Trim47-202ENSMUST00000106441 Cldn3Q9Z0G9 219 aa18.2■□□□□ 0.5
Trim47-202ENSMUST00000106441 Dsg3O35902 993 aa18.19■□□□□ 0.5
Trim47-202ENSMUST00000106441 Limk2O54785 638 aa18.19■□□□□ 0.5
Trim47-202ENSMUST00000106441 En1P09065 401 aa18.19■□□□□ 0.5
Trim47-202ENSMUST00000106441 CtsdP18242 410 aaKnown RBP18.19■□□□□ 0.5
Trim47-202ENSMUST00000106441 Eci1P42125 289 aaKnown RBP18.19■□□□□ 0.5
Trim47-202ENSMUST00000106441 EsrrgP62509 458 aa18.19■□□□□ 0.5
Trim47-202ENSMUST00000106441 Cldn11Q60771 207 aa18.19■□□□□ 0.5
Trim47-202ENSMUST00000106441 Stmnd1Q6P3A1 279 aa18.19■□□□□ 0.5
Trim47-202ENSMUST00000106441 Cxcr1Q810W6 351 aa18.19■□□□□ 0.5
Trim47-202ENSMUST00000106441 Ticam2Q8BJQ4 232 aa18.19■□□□□ 0.5
Trim47-202ENSMUST00000106441 Sept10Q8C650 452 aa18.19■□□□□ 0.5
Trim47-202ENSMUST00000106441 Tmem135Q9CYV5 458 aa18.19■□□□□ 0.5
Trim47-202ENSMUST00000106441 Scamp5Q9JKD3 235 aa18.19■□□□□ 0.5
Trim47-202ENSMUST00000106441 Cdh22Q9WTP5 813 aa18.19■□□□□ 0.5
Trim47-202ENSMUST00000106441 Rp1P56716 2095 aa18.19■□□□□ 0.5
Trim47-202ENSMUST00000106441 Umodl1Q5DID3 1319 aa18.19■□□□□ 0.5
Trim47-202ENSMUST00000106441 Btbd35f16A0A087WSN2 498 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Lcn6A2AJB9 181 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 5830411N06RikB3F5L4 1112 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Gm3526E9PZM0 191 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Pabpc4lG5E8X2 370 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Rundc3aO08576 446 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 GsnP13020 780 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Kctd21Q3URF8 260 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 MogQ61885 246 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 CcncQ62447 283 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 DbhQ64237 622 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Pcdhga7Q6DD96 935 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Clec18aQ7TSQ1 534 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Znf423Q80TS5 1292 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 MylipQ8BM54 445 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Cdh7Q8BM92 785 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Uhrf1Q8VDF2 782 aaKnown RBP18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Lgals12Q91VD1 314 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 TrabdQ99JY4 376 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 DhddsQ99KU1 333 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Itfg1Q99KW9 610 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 MmadhcQ99LS1 296 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Nuf2Q99P69 463 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Gemin2Q9CQQ4 269 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Prpsap1Q9D0M1 356 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 CtsmQ9JL96 333 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Nt5cQ9JM14 200 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Zfp985A2A7A5 519 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Vmn1r3A2AMT7 306 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Ifit3bE9PV48 403 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Alox8O35936 677 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Klk1b8P07628 261 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Spp1P10923 294 aaKnown RBP18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Tsta3P23591 321 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Msr1P30204 458 aaKnown RBP18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Defb25Q30KN8 71 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Trmt10cQ3UFY8 414 aaKnown RBP18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Lrrc8eQ66JT1 795 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Mon1aQ6PDG8 556 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Sox11Q7M6Y2 395 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Lrrc8dQ8BGR2 859 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Smad3Q8BUN5 425 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Fndc3aQ8BX90 1198 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Slc35e2Q8C811 405 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Kremen2Q8K1S7 461 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Vmn1r79Q8R285 306 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Ppp6r2Q8R3Q2 923 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Gramd1aQ8VEF1 722 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 HnrnprQ8VHM5 632 aaKnown RBP18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Oser1Q9D722 291 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Bpifa3Q9D9J8 232 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Syde1Q9DBZ9 737 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 MecrQ9DCS3 373 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 Il22Q9JJY9 179 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 St6galnac1Q9QZ39 526 aa18.18■□□□□ 0.5
Trim47-202ENSMUST00000106441 PtprfA2A8L5 1898 aa18.17■□□□□ 0.5
Trim47-202ENSMUST00000106441 1600015I10RikE9Q745 711 aa18.17■□□□□ 0.5
Trim47-202ENSMUST00000106441 Man1a1P45700 655 aa18.17■□□□□ 0.5
Trim47-202ENSMUST00000106441 TubP50586 505 aa18.17■□□□□ 0.5
Trim47-202ENSMUST00000106441 YwhaqP68254 245 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 27 ms