RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 GmppbQ8BTZ7 360 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Fam221bQ8C627 487 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Use1Q9CQ56 270 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Cyp3a41aQ9JMA7 504 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Vmn2r17E9PYF5 849 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Gpr17Q6NS65 339 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Syt14Q7TN84 555 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 GnsQ8BFR4 544 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Galnt13Q8CF93 556 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Ints10Q8K2A7 710 aaKnown RBP11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Fndc5Q8K4Z2 209 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Agpat5Q9D1E8 365 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Atg7Q9D906 698 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Hes6Q9JHE6 224 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Sae1Q9R1T2 350 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Vmn2r25W4VSP2 855 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Pkd2l1A2A259 760 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Prdx3P20108 257 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Cpne9Q1RLL3 553 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Lsmem1Q3UQS2 128 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Adam2Q60718 735 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Fastkd5Q7TMV3 762 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Olfr735Q7TRM4 354 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Olfr667Q7TRP4 326 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Olfr533Q7TRT7 320 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Kctd13Q8BGV7 329 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Mptx1Q8R1M8 219 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Depdc7Q91WS7 511 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Mrpl45Q9D0Q7 306 aaKnown RBP11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 IvdQ9JHI5 424 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Gm43951A0A0N4SUT6 962 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Zfp612A0A1D5RMC2 672 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Gbx2P48031 348 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Ezh1P70351 747 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Mat2aQ3THS6 395 aaKnown RBP11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 D3Ertd751eQ8BGN2 192 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Mfsd5Q921Y4 450 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Sfxn1Q99JR1 322 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Cby3Q9CVN6 235 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Dusp6Q9DBB1 381 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Itgb1bp2Q9R000 350 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Skp1Q9WTX5 163 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Bscl2Q9Z2E9 383 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Gm13276A0A087WR18 182 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Tyw5A2RSX7 315 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Dync1i2O88487 612 aaKnown RBP11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Htr5bP31387 370 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 TekQ02858 1122 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Prss36Q5K2P8 849 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Mapre3Q6PER3 281 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Prpf38bQ80SY5 542 aaKnown RBP11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 PisdQ8BSF4 406 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Zhx3Q8C0Q2 951 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Vmn1r188Q8K3N2 308 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 MiosQ8VE19 875 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Tspan1Q99J59 240 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Ndel1Q9ERR1 345 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 FarsbQ9WUA2 589 aaKnown RBP11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Gm11239E9Q5Z9 360 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Gm11237F2Z3W5 360 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Gm11238F2Z478 360 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Creb1Q01147 341 aaKnown RBP11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Lingo4Q149C3 593 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Gm428Q3UTE2 360 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Klra8Q60682 266 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Tmem74Q8BQU7 305 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Plin5Q8BVZ1 463 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Ythdf3Q8BYK6 585 aaKnown RBP11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Sgpl1Q8R0X7 568 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 GrpQ8R1I2 146 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Slc25a36Q922G0 311 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Ssr2Q9CPW5 183 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Gm4869A0A1B0GSG7 984 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Gm21885A0A286YDN8 145 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Fam217bA2AJW5 387 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Adh6aE9Q5Z6 375 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Gm17093F6XGJ4 214 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Ccng1P51945 294 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Garnl3Q3V0G7 1038 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Pacs2Q3V3Q7 862 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Olfr1128Q7TR47 311 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Gpr61Q8C010 449 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Scamp1Q8K021 338 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Tspan33Q8R3S2 283 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Gramd1aQ8VEF1 722 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Nrif1Q923B3 828 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Itfg1Q99KW9 610 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 ProzQ9CQW3 399 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Tdrd12Q9CWU0 1215 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Slc23a4A0A0J9YUX7 615 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Xlr5aA2BI45 236 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Ptrhd1D3Z4S3 140 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Vmn2r44L7N2E1 861 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Tbc1d10aP58802 500 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Cdk18Q04899 451 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 TraddQ3U0V2 310 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 MyrfQ3UR85 1138 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Esrp1Q3US41 680 aaKnown RBP11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Vat1Q62465 406 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Fzd10Q8BKG4 582 aa11.79□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms