RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Cyp2r1Q6VVW9 501 aa14.89□□□□□ -0.03
Nup54-201ENSMUST00000038514 Parp12Q8BZ20 711 aaKnown RBP14.89□□□□□ -0.03
Nup54-201ENSMUST00000038514 Trib2Q8K4K3 343 aa14.89□□□□□ -0.03
Nup54-201ENSMUST00000038514 Kif12Q9D2Z8 642 aa14.89□□□□□ -0.03
Nup54-201ENSMUST00000038514 4933425L06RikQ9D3Z8 585 aa14.89□□□□□ -0.03
Nup54-201ENSMUST00000038514 PudpQ9D5U5 234 aa14.89□□□□□ -0.03
Nup54-201ENSMUST00000038514 Gsdmdc1Q9D8T2 487 aa14.89□□□□□ -0.03
Nup54-201ENSMUST00000038514 Ddi1Q9DAF3 408 aa14.89□□□□□ -0.03
Nup54-201ENSMUST00000038514 Znrf4Q9DAH2 327 aa14.89□□□□□ -0.03
Nup54-201ENSMUST00000038514 AcadsbQ9DBL1 432 aa14.89□□□□□ -0.03
Nup54-201ENSMUST00000038514 Oxct2bQ9ESL0 520 aa14.89□□□□□ -0.03
Nup54-201ENSMUST00000038514 Kat2bQ9JHD1 813 aa14.89□□□□□ -0.03
Nup54-201ENSMUST00000038514 Oxct2aQ9JJN4 520 aa14.89□□□□□ -0.03
Nup54-201ENSMUST00000038514 L3mbtl1A2A5N8 826 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Zscan5bB2RTN3 468 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Gm4847G3X946 537 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Gm8011K7N6Y5 207 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 NapsaO09043 419 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Uba1Q02053 1058 aaKnown RBP14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 SPINDOCQ05AH6 381 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Cd163Q2VLH6 1121 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Tmem173Q3TBT3 378 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Zyg11bQ3UFS0 744 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Lcp2Q60787 533 aaKnown RBP14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 RimklaQ6PFX8 380 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Teddm1aQ810U2 305 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Slc45a1Q8BIV7 751 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Ppp1r1cQ8BKK4 108 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Ldhal6bQ8BVP2 382 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Stk-ps2Q8C0V7 499 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Pabpc5Q8C7D3 381 aaKnown RBP14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Cacnb2Q8CC27 655 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 CtbsQ8R242 366 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Guca1bQ8VBV8 201 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Gpn2Q8VEJ1 310 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Cd209eQ91ZW7 208 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 AdprmQ99KS6 340 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Tmem9Q9CR23 183 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Dnaaf1Q9D2H9 634 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Q9D9D9 101 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Smim23Q9DAL0 136 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Epb41l4bQ9JMC8 527 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Mad2l1Q9Z1B5 205 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Pappa2E9PZ87 1789 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 4921501E09RikA0A0R4J054 908 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Prrt4B2RU40 902 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 S100zB9EJL3 99 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Znf143O70230 638 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Cdh1P09803 884 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Klrb1bP27812 223 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Igfbp4P47879 254 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 B3gat3P58158 335 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Nfatc3P97305 1075 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Kcnab3P97382 249 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Colec11Q3SXB8 272 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Pacs2Q3V3Q7 862 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Magee2Q52KG3 523 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Fam20cQ5MJS3 579 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Defa17Q64016 82 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Mgat5bQ765H6 792 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Mtmr12Q80TA6 747 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Chil6Q80W26 440 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Hmgxb4Q80Y32 594 aaKnown RBP14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Mpp7Q8BVD5 576 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Lacc1Q8BZT9 430 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Rdh13Q8CEE7 334 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Olfr665Q8VG79 316 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Hdac11Q91WA3 347 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Cyp2c50Q91X77 490 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Pcdha8Q91Y12 946 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Sh3glb1Q9JK48 365 aa14.88□□□□□ -0.03
Nup54-201ENSMUST00000038514 Klhl18A0A0G2JGN5 579 aa14.87□□□□□ -0.03
Nup54-201ENSMUST00000038514 Gm45233A0A0N4SVE0 221 aa14.87□□□□□ -0.03
Nup54-201ENSMUST00000038514 Ifit3bE9PV48 403 aa14.87□□□□□ -0.03
Nup54-201ENSMUST00000038514 Gm5415E9PXF3 478 aa14.87□□□□□ -0.03
Nup54-201ENSMUST00000038514 Vmn2r38G3UYA8 861 aa14.87□□□□□ -0.03
Nup54-201ENSMUST00000038514 Vmn2r33K7N705 861 aa14.87□□□□□ -0.03
Nup54-201ENSMUST00000038514 Polr2jO08740 117 aaKnown RBP14.87□□□□□ -0.03
Nup54-201ENSMUST00000038514 Grik2P39087 908 aa14.87□□□□□ -0.03
Nup54-201ENSMUST00000038514 Cd86P42082 309 aa14.87□□□□□ -0.03
Nup54-201ENSMUST00000038514 Hhla1Q3TYV2 514 aa14.87□□□□□ -0.03
Nup54-201ENSMUST00000038514 Trmt10cQ3UFY8 414 aaKnown RBP14.87□□□□□ -0.03
Nup54-201ENSMUST00000038514 Trim40Q3UWA4 246 aa14.87□□□□□ -0.03
Nup54-201ENSMUST00000038514 SynaQ5G5D5 617 aa14.87□□□□□ -0.03
Nup54-201ENSMUST00000038514 Wnt8aQ64527 354 aa14.87□□□□□ -0.03
Nup54-201ENSMUST00000038514 Slc25a23Q6GQS1 467 aa14.87□□□□□ -0.03
Nup54-201ENSMUST00000038514 Ddx51Q6P9R1 639 aaKnown RBP14.87□□□□□ -0.03
Nup54-201ENSMUST00000038514 Kmt5cQ6Q783 468 aa14.87□□□□□ -0.03
Nup54-201ENSMUST00000038514 C2cd4bQ80XU5 340 aa14.87□□□□□ -0.03
Nup54-201ENSMUST00000038514 Amigo2Q80ZD9 519 aa14.87□□□□□ -0.03
Nup54-201ENSMUST00000038514 Ppp1r3eQ8BRJ4 279 aa14.87□□□□□ -0.03
Nup54-201ENSMUST00000038514 Svs2Q8BS30 375 aa14.87□□□□□ -0.03
Nup54-201ENSMUST00000038514 Mospd1Q8VEL0 213 aa14.87□□□□□ -0.03
Nup54-201ENSMUST00000038514 Txndc9Q9CQ79 226 aa14.87□□□□□ -0.03
Nup54-201ENSMUST00000038514 Trmt11Q9CWH5 460 aa14.87□□□□□ -0.03
Nup54-201ENSMUST00000038514 Katnbl1Q9CWJ3 299 aa14.87□□□□□ -0.03
Nup54-201ENSMUST00000038514 Aldoart1A6ZI46 419 aa14.87□□□□□ -0.03
Nup54-201ENSMUST00000038514 Gm17175E9Q528 179 aa14.87□□□□□ -0.03
Nup54-201ENSMUST00000038514 Spata31E9QAF0 1014 aa14.87□□□□□ -0.03
Nup54-201ENSMUST00000038514 Cyp2c68K7N6C2 491 aa14.87□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 33.3 ms