RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Slc6a20bO88575 635 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Olfm1O88998 485 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Il1rnP25085 178 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Vav1P27870 845 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 RxrbP28704 520 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Tmem199Q5SYH2 208 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Znf473Q8BI67 892 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Samd14Q8K070 417 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Dclre1cQ8K4J0 705 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Atg10Q8R1P4 215 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Mcoln3Q8R4F0 553 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Slc6a20aQ8VDB9 592 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Dhrs7bQ99J47 323 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Q9CXL3 195 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 PaicsQ9DCL9 425 aa10.24□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gm7073E9QAS1 335 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Ebf2O08792 575 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Fkbp7O54998 218 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Pgk1P09411 417 aaKnown RBP10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 HecaQ3V1N5 544 aaKnown RBP10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Pacs2Q3V3Q7 862 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Slc5a10Q5SWY8 596 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gxylt2Q810K9 444 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Atp6v1g3Q8BMC1 118 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Mettl21eQ8CDZ2 244 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Calhm4Q8CE93 315 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Spp2Q8K1I3 203 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Rnf219Q8K2Y0 722 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Aim2Q91VJ1 354 aaKnown RBP10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Arl2Q9D0J4 184 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Mrpl45Q9D0Q7 306 aaKnown RBP10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 St6galnac4Q9R2B6 360 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Fkbp1bQ9Z2I2 108 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gm3752A6NAT4 150 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Vmn2r120E9PX34 856 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Zdhhc18Q5Y5T2 380 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Vtcn1Q7TSP5 283 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Prpf38bQ80SY5 542 aaKnown RBP10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Mrps35Q8BJZ4 320 aaKnown RBP10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Ptpn7Q8BUM3 359 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 TpbglQ8C013 384 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Tbc1d14Q8CGA2 694 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 GaleQ8R059 347 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 DolkQ8R2Y3 534 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Nsmce2Q91VT1 247 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Ifi44lQ9BDB7 447 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Glod4Q9CPV4 298 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Cpxm2Q9D2L5 764 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Hacd2Q9D3B1 254 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Q9D3J9 298 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Cngb3Q9JJZ9 694 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Dnaja4Q9JMC3 397 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 CpqQ9WVJ3 470 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gm13101A2ASJ0 481 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gm13212B1ASQ7 799 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Idh2P54071 452 aaKnown RBP10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 KapP61110 121 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Grin2cQ01098 1239 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Bpifa6Q0VGU8 367 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 KrtdapQ3V2T4 102 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Six1Q62231 284 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Rrm2bQ6PEE3 351 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Crls1Q80ZM8 303 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Map2k7Q8CE90 535 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Cdc73Q8JZM7 531 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 D8Ertd738eQ8R1F0 94 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Acsf2Q8VCW8 615 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Vsig1Q9D2J4 407 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Tmem176aQ9DCS1 244 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gmeb1Q9JL60 562 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Ninj2Q9JL89 143 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Arl10Q9QXJ4 243 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gm21885A0A286YDN8 145 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gm10721J3QPJ9 223 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Cbx4O55187 551 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Mtnd4P03911 459 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 AbrQ5SSL4 859 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Kcnh1Q60603 989 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Olfr1198Q7TR12 308 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Susd6Q8BGE4 302 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Serpina11Q8CIE0 424 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Sgpl1Q8R0X7 568 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 ClmpQ8R373 373 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Olfr342Q8VGK7 312 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Nrif1Q923B3 828 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Ggt7Q99JP7 662 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Ampd2Q9DBT5 798 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Tle6Q9WVB3 581 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Vmn2r25W4VSP2 855 aa10.23□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Ralgps1A2AR50 585 aa10.22□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gm6811E9Q3Y8 510 aa10.22□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Pdzd7E9Q9W7 1021 aa10.22□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gm10324L7N208 604 aa10.22□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Dok6Q2MHE5 331 aa10.22□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 CamkmtQ3U2J5 323 aa10.22□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Trim40Q3UWA4 246 aa10.22□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 NkaplQ5SZT7 395 aa10.22□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 FaddQ61160 205 aa10.22□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Eif2dQ61211 570 aaKnown RBP10.22□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 AtminQ6P9S1 818 aa10.22□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 45.6 ms