RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 K7ERQ8 282 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 FCHO1O14526 889 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 CCDC22O60826 627 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 FGF1P05230 155 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 RALBP11234 206 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 CR2P20023 1033 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 NFKBIAP25963 317 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 ITGB7P26010 798 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 PTPN4P29074 926 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 SERPINB3P29508 390 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 CD151P48509 253 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 RAB10P61026 200 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 ABCE1P61221 599 aaKnown RBP10.22□□□□□ -0.77
PHGDH-224ENST00000641711 MAXP61244 160 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 RPS14P62263 151 aaKnown RBP10.22□□□□□ -0.77
PHGDH-224ENST00000641711 IRX4P78413 519 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 POU4F1Q01851 419 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 ITKQ08881 620 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 TCF15Q12870 199 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 USP10Q14694 798 aaKnown RBP10.22□□□□□ -0.77
PHGDH-224ENST00000641711 CYTH1Q15438 398 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 TBCCQ15814 346 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 SNCBQ16143 134 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 SIRPB2Q5JXA9 342 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 KIAA1324Q6UXG2 1013 aaKnown RBP10.22□□□□□ -0.77
PHGDH-224ENST00000641711 ZYG11AQ6WRX3 759 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 WDR75Q8IWA0 830 aaKnown RBP10.22□□□□□ -0.77
PHGDH-224ENST00000641711 STK40Q8N2I9 435 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 PGBD3Q8N328 593 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.22□□□□□ -0.77
PHGDH-224ENST00000641711 ZNF366Q8N895 744 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 ACVR1CQ8NER5 493 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 PRSS33Q8NF86 280 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 PIP4K2CQ8TBX8 421 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 PIWIL2Q8TC59 973 aaKnown RBP10.22□□□□□ -0.77
PHGDH-224ENST00000641711 PPP4R1Q8TF05 950 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 SREK1Q8WXA9 508 aaKnown RBP10.22□□□□□ -0.77
PHGDH-224ENST00000641711 STON2Q8WXE9 905 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 RAB7BQ96AH8 199 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 PTCD3Q96EY7 689 aaKnown RBP10.22□□□□□ -0.77
PHGDH-224ENST00000641711 NSL1Q96IY1 281 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 ZNF641Q96N77 438 aaPredicted RBP10.22□□□□□ -0.77
PHGDH-224ENST00000641711 NUDCD1Q96RS6 583 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 SORT1Q99523 831 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 SEMA3CQ99985 751 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 HDAC8Q9BY41 377 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 TM6SF2Q9BZW4 377 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 ATP13A3Q9H7F0 1226 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 ZNF395Q9H8N7 513 aaPredicted RBP10.22□□□□□ -0.77
PHGDH-224ENST00000641711 CAB39LQ9H9S4 337 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 SGK2Q9HBY8 427 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 ITM2CQ9NQX7 267 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 DYRK4Q9NR20 520 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 SLC2A6Q9UGQ3 507 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 FBXO5Q9UKT4 447 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 SLC39A10Q9ULF5 831 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 NCKAP1Q9Y2A7 1128 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 WASF2Q9Y6W5 498 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 TRPM6Q9BX84 2022 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 PI4KAP42356 2102 aa10.22□□□□□ -0.77
PHGDH-224ENST00000641711 TNRC6BQ9UPQ9 1833 aaKnown RBP10.21□□□□□ -0.77
PHGDH-224ENST00000641711 SDK1Q7Z5N4 2213 aa10.21□□□□□ -0.77
PHGDH-224ENST00000641711 GPR179Q6PRD1 2367 aa10.21□□□□□ -0.77
PHGDH-224ENST00000641711 A0A087X1B8 175 aa10.21□□□□□ -0.77
PHGDH-224ENST00000641711 FAM95CA0A1B0GW59 222 aa10.21□□□□□ -0.77
PHGDH-224ENST00000641711 CAPN14A8MX76 684 aa10.21□□□□□ -0.77
PHGDH-224ENST00000641711 TARM1B6A8C7 271 aa10.21□□□□□ -0.77
PHGDH-224ENST00000641711 GOLGA8TH3BQL2 631 aa10.21□□□□□ -0.77
PHGDH-224ENST00000641711 HGSO14964 777 aaPredicted RBP10.21□□□□□ -0.77
PHGDH-224ENST00000641711 MUSKO15146 869 aa10.21□□□□□ -0.77
PHGDH-224ENST00000641711 LDB2O43679 373 aa10.21□□□□□ -0.77
PHGDH-224ENST00000641711 ITM2AO43736 263 aa10.21□□□□□ -0.77
PHGDH-224ENST00000641711 TRIM13O60858 407 aa10.21□□□□□ -0.77
PHGDH-224ENST00000641711 RPP40O75818 363 aaKnown RBP10.21□□□□□ -0.77
PHGDH-224ENST00000641711 WFS1O76024 890 aa10.21□□□□□ -0.77
PHGDH-224ENST00000641711 CBX6O95503 412 aa10.21□□□□□ -0.77
PHGDH-224ENST00000641711 KRT16P08779 473 aa10.21□□□□□ -0.77
PHGDH-224ENST00000641711 SLC35E2BP0CK96 405 aa10.21□□□□□ -0.77
PHGDH-224ENST00000641711 CALB2P22676 271 aa10.21□□□□□ -0.77
PHGDH-224ENST00000641711 PSMA3P25788 255 aa10.21□□□□□ -0.77
PHGDH-224ENST00000641711 SERPINA4P29622 427 aa10.21□□□□□ -0.77
PHGDH-224ENST00000641711 SLC8A1P32418 973 aa10.21□□□□□ -0.77
PHGDH-224ENST00000641711 NUDT1P36639 197 aa10.21□□□□□ -0.77
PHGDH-224ENST00000641711 NBL1P41271 181 aa10.21□□□□□ -0.77
PHGDH-224ENST00000641711 SLC1A2P43004 574 aa10.21□□□□□ -0.77
PHGDH-224ENST00000641711 LEPRP48357 1165 aaKnown RBP10.21□□□□□ -0.77
PHGDH-224ENST00000641711 FNTBP49356 437 aa10.21□□□□□ -0.77
PHGDH-224ENST00000641711 HK2P52789 917 aa10.21□□□□□ -0.77
PHGDH-224ENST00000641711 MPP1Q00013 466 aa10.21□□□□□ -0.77
PHGDH-224ENST00000641711 IRF9Q00978 393 aa10.21□□□□□ -0.77
PHGDH-224ENST00000641711 SMAD1Q15797 465 aaKnown RBP10.21□□□□□ -0.77
PHGDH-224ENST00000641711 PCSK7Q16549 785 aa10.21□□□□□ -0.77
PHGDH-224ENST00000641711 TSNAXIP1Q2TAA8 658 aa10.21□□□□□ -0.77
PHGDH-224ENST00000641711 MYLK3Q32MK0 819 aa10.21□□□□□ -0.77
PHGDH-224ENST00000641711 MAP7D1Q3KQU3 841 aa10.21□□□□□ -0.77
PHGDH-224ENST00000641711 ZNF805Q5CZA5 627 aa10.21□□□□□ -0.77
PHGDH-224ENST00000641711 BRAT1Q6PJG6 821 aa10.21□□□□□ -0.77
PHGDH-224ENST00000641711 ZCCHC23Q6ZST2 131 aa10.21□□□□□ -0.77
PHGDH-224ENST00000641711 MMAAQ8IVH4 418 aaKnown RBP10.21□□□□□ -0.77
PHGDH-224ENST00000641711 DENND6AQ8IWF6 608 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms