RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 MAXP61244 160 aa13.68□□□□□ -0.22
SCARB2-227ENST00000640957 ADARB1P78563 741 aaKnown RBP13.68□□□□□ -0.22
SCARB2-227ENST00000640957 KCNAB2Q13303 367 aa13.68□□□□□ -0.22
SCARB2-227ENST00000640957 LRIT3Q3SXY7 679 aa13.68□□□□□ -0.22
SCARB2-227ENST00000640957 SNAP47Q5SQN1 464 aa13.68□□□□□ -0.22
SCARB2-227ENST00000640957 CELF3Q5SZQ8 465 aaKnown RBP13.68□□□□□ -0.22
SCARB2-227ENST00000640957 LARP4Q71RC2 724 aaKnown RBP eCLIP13.68□□□□□ -0.22
SCARB2-227ENST00000640957 MILR1Q7Z6M3 343 aa13.68□□□□□ -0.22
SCARB2-227ENST00000640957 LINC00523Q86TU6 105 aa13.68□□□□□ -0.22
SCARB2-227ENST00000640957 ATL1Q8WXF7 558 aa13.68□□□□□ -0.22
SCARB2-227ENST00000640957 CDK15Q96Q40 435 aa13.68□□□□□ -0.22
SCARB2-227ENST00000640957 OSMRQ99650 979 aa13.68□□□□□ -0.22
SCARB2-227ENST00000640957 AMBRA1Q9C0C7 1298 aa13.68□□□□□ -0.22
SCARB2-227ENST00000640957 TNKS2Q9H2K2 1166 aa13.68□□□□□ -0.22
SCARB2-227ENST00000640957 C14orf119Q9NWQ9 140 aa13.68□□□□□ -0.22
SCARB2-227ENST00000640957 COQ3Q9NZJ6 369 aa13.68□□□□□ -0.22
SCARB2-227ENST00000640957 PCM1Q15154 2024 aa13.68□□□□□ -0.22
SCARB2-227ENST00000640957 CCNKO75909 580 aa13.68□□□□□ -0.22
SCARB2-227ENST00000640957 CYP2B6P20813 491 aa13.68□□□□□ -0.22
SCARB2-227ENST00000640957 ARNTP27540 789 aa13.68□□□□□ -0.22
SCARB2-227ENST00000640957 RBP5P82980 135 aa13.68□□□□□ -0.22
SCARB2-227ENST00000640957 UBE2J2Q8N2K1 259 aa13.68□□□□□ -0.22
SCARB2-227ENST00000640957 PTGR2Q8N8N7 351 aaPredicted RBP13.68□□□□□ -0.22
SCARB2-227ENST00000640957 ZNF486Q96H40 463 aaPredicted RBP13.68□□□□□ -0.22
SCARB2-227ENST00000640957 MRPL57Q9BQC6 102 aaKnown RBP13.68□□□□□ -0.22
SCARB2-227ENST00000640957 CARS2Q9HA77 564 aaKnown RBP13.68□□□□□ -0.22
SCARB2-227ENST00000640957 MEAF6Q9HAF1 191 aa13.68□□□□□ -0.22
SCARB2-227ENST00000640957 MRGBPQ9NV56 204 aa13.68□□□□□ -0.22
SCARB2-227ENST00000640957 ERAP1Q9NZ08 941 aa13.68□□□□□ -0.22
SCARB2-227ENST00000640957 ACTR3BQ9P1U1 418 aa13.68□□□□□ -0.22
SCARB2-227ENST00000640957 KCTD3Q9Y597 815 aa13.68□□□□□ -0.22
SCARB2-227ENST00000640957 ZNF37AP17032 561 aaPredicted RBP13.67□□□□□ -0.22
SCARB2-227ENST00000640957 YWHAHQ04917 246 aaPredicted RBP13.67□□□□□ -0.22
SCARB2-227ENST00000640957 TP53BP2Q13625 1128 aa13.67□□□□□ -0.22
SCARB2-227ENST00000640957 TRIP4Q15650 581 aaPredicted RBP13.67□□□□□ -0.22
SCARB2-227ENST00000640957 SPRED1Q7Z699 444 aa13.67□□□□□ -0.22
SCARB2-227ENST00000640957 TWIST2Q8WVJ9 160 aa13.67□□□□□ -0.22
SCARB2-227ENST00000640957 ZNF419Q96HQ0 510 aaPredicted RBP13.67□□□□□ -0.22
SCARB2-227ENST00000640957 NODALQ96S42 347 aa13.67□□□□□ -0.22
SCARB2-227ENST00000640957 TTYH2Q9BSA4 534 aa13.67□□□□□ -0.22
SCARB2-227ENST00000640957 DNAI2Q9GZS0 605 aa13.67□□□□□ -0.22
SCARB2-227ENST00000640957 NTN4Q9HB63 628 aa13.67□□□□□ -0.22
SCARB2-227ENST00000640957 CASS4Q9NQ75 786 aa13.67□□□□□ -0.22
SCARB2-227ENST00000640957 IGSF5Q9NSI5 407 aa13.67□□□□□ -0.22
SCARB2-227ENST00000640957 FBXO10Q9UK96 956 aa13.67□□□□□ -0.22
SCARB2-227ENST00000640957 TIMM13Q9Y5L4 95 aaPredicted RBP13.67□□□□□ -0.22
SCARB2-227ENST00000640957 LOC100506127A0A0U1RQW1 187 aa13.67□□□□□ -0.22
SCARB2-227ENST00000640957 MEN1O00255 615 aa13.67□□□□□ -0.22
SCARB2-227ENST00000640957 ENPP3O14638 875 aa13.67□□□□□ -0.22
SCARB2-227ENST00000640957 TFECO14948 347 aaPredicted RBP13.67□□□□□ -0.22
SCARB2-227ENST00000640957 HBP1O60381 514 aa13.67□□□□□ -0.22
SCARB2-227ENST00000640957 CLASP2O75122 1294 aaKnown RBP13.67□□□□□ -0.22
SCARB2-227ENST00000640957 PRSS56P0CW18 603 aa13.67□□□□□ -0.22
SCARB2-227ENST00000640957 PROZP22891 400 aa13.67□□□□□ -0.22
SCARB2-227ENST00000640957 POLD2P49005 469 aa13.67□□□□□ -0.22
SCARB2-227ENST00000640957 ATP6V0D1P61421 351 aa13.67□□□□□ -0.22
SCARB2-227ENST00000640957 EMX1Q04741 257 aaPredicted RBP13.67□□□□□ -0.22
SCARB2-227ENST00000640957 PPIL2Q13356 520 aa13.67□□□□□ -0.22
SCARB2-227ENST00000640957 CCDC58Q4VC31 144 aa13.67□□□□□ -0.22
SCARB2-227ENST00000640957 C6orf141Q5SZD1 244 aa13.67□□□□□ -0.22
SCARB2-227ENST00000640957 AGAP7PQ5VUJ5 663 aa13.67□□□□□ -0.22
SCARB2-227ENST00000640957 RAP1GAP2Q684P5 730 aa13.67□□□□□ -0.22
SCARB2-227ENST00000640957 TMEM207Q6UWW9 146 aa13.67□□□□□ -0.22
SCARB2-227ENST00000640957 C4orf22Q6V702 233 aa13.67□□□□□ -0.22
SCARB2-227ENST00000640957 CALML6Q8TD86 181 aa13.67□□□□□ -0.22
SCARB2-227ENST00000640957 OSBPL10Q9BXB5 764 aa13.67□□□□□ -0.22
SCARB2-227ENST00000640957 TRIM15Q9C019 465 aa13.67□□□□□ -0.22
SCARB2-227ENST00000640957 AKIP1Q9NQ31 210 aa13.67□□□□□ -0.22
SCARB2-227ENST00000640957 SCN1AP35498 2009 aa13.67□□□□□ -0.22
SCARB2-227ENST00000640957 HRH2P25021 359 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 LEPRP48357 1165 aaKnown RBP13.66□□□□□ -0.22
SCARB2-227ENST00000640957 FAM45BPQ6NSW5 357 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 RFPL4BQ6ZWI9 263 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 PLD3Q8IV08 490 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 MICU2Q8IYU8 434 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 CHDHQ8NE62 594 aaPredicted RBP13.66□□□□□ -0.22
SCARB2-227ENST00000640957 FAM45AQ8TCE6 357 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 ABCG8Q9H221 673 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 TUBB1Q9H4B7 451 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 GSTO2Q9H4Y5 243 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 ZBTB20Q9HC78 741 aaPredicted RBP13.66□□□□□ -0.22
SCARB2-227ENST00000640957 PRMT7Q9NVM4 692 aaPredicted RBP13.66□□□□□ -0.22
SCARB2-227ENST00000640957 VWA7Q9Y334 891 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 PGLSO95336 258 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 CPNE6O95741 557 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 ARPC4P59998 168 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 CYP4F2P78329 520 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 CYP4F3Q08477 520 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 VAC14Q08AM6 782 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 NAB1Q13506 487 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 TARBP2Q15633 366 aaKnown RBP13.66□□□□□ -0.22
SCARB2-227ENST00000640957 TAF2Q6P1X5 1199 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 LYPD8Q6UX82 237 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 ARMC8Q8IUR7 673 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 AFAP1L2Q8N4X5 818 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 MCOLN3Q8TDD5 553 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 NSMCE2Q96MF7 247 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 CDK5RAP1Q96SZ6 601 aaKnown RBP13.66□□□□□ -0.22
SCARB2-227ENST00000640957 C17orf80Q9BSJ5 609 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 EML4Q9HC35 981 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms