RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-209ENST00000640554 SIX1Q15475 284 aaPredicted RBP14.11□□□□□ -0.15
SDHD-209ENST00000640554 CLPPQ16740 277 aaPredicted RBP14.11□□□□□ -0.15
SDHD-209ENST00000640554 LRRK1Q38SD2 2015 aa14.11□□□□□ -0.15
SDHD-209ENST00000640554 CERCAMQ5T4B2 595 aa14.11□□□□□ -0.15
SDHD-209ENST00000640554 MARK2Q7KZI7 788 aaKnown RBP14.11□□□□□ -0.15
SDHD-209ENST00000640554 TRIM74Q86UV6 250 aa14.11□□□□□ -0.15
SDHD-209ENST00000640554 RASGEF1CQ8N431 466 aa14.11□□□□□ -0.15
SDHD-209ENST00000640554 KDF1Q8NAX2 398 aaPredicted RBP14.11□□□□□ -0.15
SDHD-209ENST00000640554 KYQ8NBH2 561 aa14.11□□□□□ -0.15
SDHD-209ENST00000640554 CCL4L1Q8NHW4 92 aa14.11□□□□□ -0.15
SDHD-209ENST00000640554 ZNF398Q8TD17 642 aa14.11□□□□□ -0.15
SDHD-209ENST00000640554 ZDHHC1Q8WTX9 485 aa14.11□□□□□ -0.15
SDHD-209ENST00000640554 HEXDCQ8WVB3 486 aa14.11□□□□□ -0.15
SDHD-209ENST00000640554 ZNF514Q96K75 400 aaPredicted RBP14.11□□□□□ -0.15
SDHD-209ENST00000640554 CNTNAP3BQ96NU0 1288 aa14.11□□□□□ -0.15
SDHD-209ENST00000640554 TMEM121BQ9BXQ6 578 aaPredicted RBP14.11□□□□□ -0.15
SDHD-209ENST00000640554 CNTNAP3Q9BZ76 1288 aa14.11□□□□□ -0.15
SDHD-209ENST00000640554 NRSN2Q9GZP1 204 aa14.11□□□□□ -0.15
SDHD-209ENST00000640554 OR2AG1Q9H205 316 aa14.11□□□□□ -0.15
SDHD-209ENST00000640554 KCNF1Q9H3M0 494 aa14.11□□□□□ -0.15
SDHD-209ENST00000640554 SPATS2LQ9NUQ6 558 aaKnown RBP14.11□□□□□ -0.15
SDHD-209ENST00000640554 SMOXQ9NWM0 555 aa14.11□□□□□ -0.15
SDHD-209ENST00000640554 SIRPGQ9P1W8 387 aa14.11□□□□□ -0.15
SDHD-209ENST00000640554 ATXN10Q9UBB4 475 aa14.11□□□□□ -0.15
SDHD-209ENST00000640554 DNMT3AQ9Y6K1 912 aaPredicted RBP14.11□□□□□ -0.15
SDHD-209ENST00000640554 OAS3Q9Y6K5 1087 aaKnown RBP14.11□□□□□ -0.15
SDHD-209ENST00000640554 SUN1O94901 812 aa14.1□□□□□ -0.15
SDHD-209ENST00000640554 MYF5P13349 255 aa14.1□□□□□ -0.15
SDHD-209ENST00000640554 VCLP18206 1134 aa14.1□□□□□ -0.15
SDHD-209ENST00000640554 GPR3P46089 330 aa14.1□□□□□ -0.15
SDHD-209ENST00000640554 LMAN1P49257 510 aa14.1□□□□□ -0.15
SDHD-209ENST00000640554 CDH17Q12864 832 aa14.1□□□□□ -0.15
SDHD-209ENST00000640554 TMEM115Q12893 351 aaPredicted RBP14.1□□□□□ -0.15
SDHD-209ENST00000640554 TARDBPQ13148 414 aaKnown RBP eCLIP14.1□□□□□ -0.15
SDHD-209ENST00000640554 BIRC2Q13490 618 aa14.1□□□□□ -0.15
SDHD-209ENST00000640554 CAMK2BQ13554 666 aa14.1□□□□□ -0.15
SDHD-209ENST00000640554 SEMA5AQ13591 1074 aa14.1□□□□□ -0.15
SDHD-209ENST00000640554 SNX1Q13596 522 aa14.1□□□□□ -0.15
SDHD-209ENST00000640554 CHRNA6Q15825 494 aa14.1□□□□□ -0.15
SDHD-209ENST00000640554 GPR33Q49SQ1 333 aa14.1□□□□□ -0.15
SDHD-209ENST00000640554 ATP13A5Q4VNC0 1218 aa14.1□□□□□ -0.15
SDHD-209ENST00000640554 SLC30A9Q6PML9 568 aa14.1□□□□□ -0.15
SDHD-209ENST00000640554 NYAP1Q6ZVC0 841 aa14.1□□□□□ -0.15
SDHD-209ENST00000640554 GSTA5Q7RTV2 222 aa14.1□□□□□ -0.15
SDHD-209ENST00000640554 ADGRG6Q86SQ4 1221 aa14.1□□□□□ -0.15
SDHD-209ENST00000640554 LRRTM4Q86VH4 590 aa14.1□□□□□ -0.15
SDHD-209ENST00000640554 DDHD1Q8NEL9 900 aa14.1□□□□□ -0.15
SDHD-209ENST00000640554 OR4K2Q8NGD2 314 aa14.1□□□□□ -0.15
SDHD-209ENST00000640554 GDAP1Q8TB36 358 aa14.1□□□□□ -0.15
SDHD-209ENST00000640554 ULK4Q96C45 1275 aa14.1□□□□□ -0.15
SDHD-209ENST00000640554 APOL2Q9BQE5 337 aa14.1□□□□□ -0.15
SDHD-209ENST00000640554 CCDC3Q9BQI4 270 aa14.1□□□□□ -0.15
SDHD-209ENST00000640554 ETNK1Q9HBU6 452 aa14.1□□□□□ -0.15
SDHD-209ENST00000640554 RAB6BQ9NRW1 208 aa14.1□□□□□ -0.15
SDHD-209ENST00000640554 LRIT1Q9P2V4 623 aa14.1□□□□□ -0.15
SDHD-209ENST00000640554 ARL5AQ9Y689 179 aa14.1□□□□□ -0.15
SDHD-209ENST00000640554 TP53BP1Q12888 1972 aaPredicted RBP14.09□□□□□ -0.15
SDHD-209ENST00000640554 TRABD2BA6NFA1 517 aa14.09□□□□□ -0.15
SDHD-209ENST00000640554 AGAP14A8MT82 685 aa14.09□□□□□ -0.15
SDHD-209ENST00000640554 B4DGG1 531 aa14.09□□□□□ -0.15
SDHD-209ENST00000640554 USP12O75317 370 aa14.09□□□□□ -0.15
SDHD-209ENST00000640554 ZNF8P17098 575 aaPredicted RBP14.09□□□□□ -0.15
SDHD-209ENST00000640554 AK4P27144 223 aaPredicted RBP14.09□□□□□ -0.15
SDHD-209ENST00000640554 CXCR5P32302 372 aa14.09□□□□□ -0.15
SDHD-209ENST00000640554 CDK16Q00536 496 aa14.09□□□□□ -0.15
SDHD-209ENST00000640554 SPARCL1Q14515 664 aa14.09□□□□□ -0.15
SDHD-209ENST00000640554 TCEA2Q15560 299 aa14.09□□□□□ -0.15
SDHD-209ENST00000640554 SKIDA1Q1XH10 827 aa14.09□□□□□ -0.15
SDHD-209ENST00000640554 FAM151BQ6UXP7 276 aa14.09□□□□□ -0.15
SDHD-209ENST00000640554 RBM44Q6ZP01 1051 aaKnown RBP14.09□□□□□ -0.15
SDHD-209ENST00000640554 CHST15Q7LFX5 561 aaPredicted RBP14.09□□□□□ -0.15
SDHD-209ENST00000640554 NLRP9Q7RTR0 991 aa14.09□□□□□ -0.15
SDHD-209ENST00000640554 DNAAF3Q8N9W5 541 aa14.09□□□□□ -0.15
SDHD-209ENST00000640554 STYXQ8WUJ0 223 aa14.09□□□□□ -0.15
SDHD-209ENST00000640554 PTCD2Q8WV60 388 aaKnown RBP14.09□□□□□ -0.15
SDHD-209ENST00000640554 SH3KBP1Q96B97 665 aa14.09□□□□□ -0.15
SDHD-209ENST00000640554 TIMM29Q9BSF4 260 aa14.09□□□□□ -0.15
SDHD-209ENST00000640554 STN1Q9H668 368 aaKnown RBP14.09□□□□□ -0.15
SDHD-209ENST00000640554 SUDS3Q9H7L9 328 aaPredicted RBP14.09□□□□□ -0.15
SDHD-209ENST00000640554 EIF2B3Q9NR50 452 aaKnown RBP14.09□□□□□ -0.15
SDHD-209ENST00000640554 TRMT1Q9NXH9 659 aaKnown RBP14.09□□□□□ -0.15
SDHD-209ENST00000640554 RIMKLBQ9ULI2 386 aa14.09□□□□□ -0.15
SDHD-209ENST00000640554 CEP295Q9C0D2 2601 aa14.09□□□□□ -0.15
SDHD-209ENST00000640554 KIR2DS5A0A0G2JLQ3 304 aa14.08□□□□□ -0.16
SDHD-209ENST00000640554 A0A0G2JNG1 304 aa14.08□□□□□ -0.16
SDHD-209ENST00000640554 RHPN2P1A8MT19 583 aa14.08□□□□□ -0.16
SDHD-209ENST00000640554 H7C0S8 307 aa14.08□□□□□ -0.16
SDHD-209ENST00000640554 KIR2DS3K7RE56 304 aa14.08□□□□□ -0.16
SDHD-209ENST00000640554 PGRMC1O00264 195 aaKnown RBP14.08□□□□□ -0.16
SDHD-209ENST00000640554 NTN3O00634 580 aaPredicted RBP14.08□□□□□ -0.16
SDHD-209ENST00000640554 LDB2O43679 373 aa14.08□□□□□ -0.16
SDHD-209ENST00000640554 SRP72O76094 671 aaKnown RBP14.08□□□□□ -0.16
SDHD-209ENST00000640554 PRAMEF1O95521 474 aa14.08□□□□□ -0.16
SDHD-209ENST00000640554 RALBP11234 206 aa14.08□□□□□ -0.16
SDHD-209ENST00000640554 ZNF7P17097 686 aaPredicted RBP14.08□□□□□ -0.16
SDHD-209ENST00000640554 PSMA3P25788 255 aa14.08□□□□□ -0.16
SDHD-209ENST00000640554 FASLGP48023 281 aa14.08□□□□□ -0.16
SDHD-209ENST00000640554 ZNF140P52738 457 aaPredicted RBP14.08□□□□□ -0.16
SDHD-209ENST00000640554 NFATC2Q13469 925 aa14.08□□□□□ -0.16
SDHD-209ENST00000640554 SPIDRQ14159 915 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms