RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 SELENONQ9NZV5 590 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 ZNF639Q9UID6 485 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 MAGED1Q9Y5V3 778 aaPredicted RBP10.85□□□□□ -0.67
SNIP1-204ENST00000638725 ANKRD12Q6UB98 2062 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 CCDC154A6NI56 674 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 KCNH1O95259 989 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 GLP2RO95838 553 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 ATXN1LP0C7T5 689 aaKnown RBP10.85□□□□□ -0.67
SNIP1-204ENST00000638725 PIRTP0C851 137 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 UMPSP11172 480 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 HTR7P34969 479 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 MLLT10P55197 1068 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 EEFSECP57772 596 aaKnown RBP10.85□□□□□ -0.67
SNIP1-204ENST00000638725 GALNT18Q6P9A2 607 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 RALGPS2Q86X27 583 aaPredicted RBP10.85□□□□□ -0.67
SNIP1-204ENST00000638725 RNF168Q8IYW5 571 aaPredicted RBP10.85□□□□□ -0.67
SNIP1-204ENST00000638725 FBXO39Q8N4B4 442 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 BLOC1S5Q8TDH9 187 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 OSCP1Q8WVF1 389 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 TUBA1CQ9BQE3 449 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 TINF2Q9BSI4 451 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 YTHDF1Q9BYJ9 559 aaKnown RBP10.85□□□□□ -0.67
SNIP1-204ENST00000638725 NTN4Q9HB63 628 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 INIPQ9NRY2 104 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 ABCC13Q9NSE7 274 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 BLOC1S6Q9UL45 172 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 SH3BP1Q9Y3L3 701 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 DICER1Q9UPY3 1922 aaKnown RBP10.85□□□□□ -0.67
SNIP1-204ENST00000638725 CCDC162PA2VCL2 907 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 NCF1BA6NI72 391 aaPredicted RBP10.84□□□□□ -0.67
SNIP1-204ENST00000638725 NCF1CA8MVU1 366 aaPredicted RBP10.84□□□□□ -0.67
SNIP1-204ENST00000638725 CD3EAPO15446 510 aaKnown RBP10.84□□□□□ -0.67
SNIP1-204ENST00000638725 EEDO75530 441 aaKnown RBP10.84□□□□□ -0.67
SNIP1-204ENST00000638725 PRR35P0CG20 571 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 MBL2P11226 248 aaPredicted RBP10.84□□□□□ -0.67
SNIP1-204ENST00000638725 PCNAP12004 261 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 NCF1P14598 390 aaPredicted RBP10.84□□□□□ -0.67
SNIP1-204ENST00000638725 TCF3P15923 654 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 IL12AP29459 219 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 NR1D2Q14995 579 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 IQSEC1Q6DN90 963 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 GRAMD4Q6IC98 578 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 FAM171BQ6P995 826 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 SCD5Q86SK9 330 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 PGBD5Q8N414 524 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 TMEM199Q8N511 208 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 PDPRQ8NCN5 879 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 OR10T2Q8NGX3 314 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 NPLOC4Q8TAT6 608 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 BPIFB1Q8TDL5 484 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 PSMG2Q969U7 264 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 GLT1D1Q96MS3 346 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 LHPPQ9H008 270 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 SP110Q9HB58 689 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 NMUR1Q9HB89 426 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 RNF112Q9ULX5 631 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 TTC3P53804 2025 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 SYNCRIPO60506 623 aaKnown RBP10.84□□□□□ -0.67
SNIP1-204ENST00000638725 SERPINB7O75635 380 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 RSL1D1O76021 490 aaKnown RBP10.84□□□□□ -0.67
SNIP1-204ENST00000638725 CNTN5O94779 1100 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 BCL10O95999 233 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 IL7RP16871 459 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 PSEN2P49810 448 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 AGTR2P50052 363 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 BCAP31P51572 246 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 POLR2JP52435 117 aaKnown RBP10.84□□□□□ -0.67
SNIP1-204ENST00000638725 ARSFP54793 590 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 CACNB2Q08289 660 aaPredicted RBP10.84□□□□□ -0.67
SNIP1-204ENST00000638725 SPATS1Q496A3 300 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 AASDHQ4L235 1098 aaPredicted RBP10.84□□□□□ -0.67
SNIP1-204ENST00000638725 XAF1Q6GPH4 301 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 UGT3A1Q6NUS8 523 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 SPATA19Q7Z5L4 167 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 GPR142Q7Z601 462 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 SYVN1Q86TM6 617 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 LRRC49Q8IUZ0 686 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 SCML4Q8N228 414 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 OR2T11Q8NH01 316 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 RHEBL1Q8TAI7 183 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 ARRDC2Q8TBH0 407 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 PNPT1Q8TCS8 783 aaKnown RBP10.84□□□□□ -0.67
SNIP1-204ENST00000638725 ESAMQ96AP7 390 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 CYP2S1Q96SQ9 504 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 CSF3RQ99062 836 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 ACOX2Q99424 681 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 BDH2Q9BUT1 245 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 ING2Q9H160 280 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 TFB2MQ9H5Q4 396 aaKnown RBP10.84□□□□□ -0.67
SNIP1-204ENST00000638725 ADARB2Q9NS39 739 aaKnown RBP10.84□□□□□ -0.67
SNIP1-204ENST00000638725 FAM105AQ9NUU6 356 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.84□□□□□ -0.67
SNIP1-204ENST00000638725 LEF1Q9UJU2 399 aaPredicted RBP10.84□□□□□ -0.67
SNIP1-204ENST00000638725 ZNF225Q9UK10 706 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 PAIP2BQ9ULR5 123 aaKnown RBP10.84□□□□□ -0.67
SNIP1-204ENST00000638725 FAM50BQ9Y247 325 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 PCDHGA11Q9Y5H2 935 aa10.84□□□□□ -0.67
SNIP1-204ENST00000638725 C1orf232A0A0U1RR37 186 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 UBA6A0AVT1 1052 aaPredicted RBP10.83□□□□□ -0.68
SNIP1-204ENST00000638725 TMEM221A6NGB7 291 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms