RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 ETV5P41161 510 aa17.55■□□□□ 0.4
PNKP-230ENST00000638016 ATP5OP48047 213 aa17.55■□□□□ 0.4
PNKP-230ENST00000638016 ERVPABLB-1P60509 514 aa17.55■□□□□ 0.4
PNKP-230ENST00000638016 ZFP36L1Q07352 338 aaKnown RBP17.55■□□□□ 0.4
PNKP-230ENST00000638016 SLC14A2Q15849 920 aa17.55■□□□□ 0.4
PNKP-230ENST00000638016 PLA2G4EQ3MJ16 856 aa17.55■□□□□ 0.4
PNKP-230ENST00000638016 MAP9Q49MG5 647 aa17.55■□□□□ 0.4
PNKP-230ENST00000638016 ZNF569Q5MCW4 686 aa17.55■□□□□ 0.4
PNKP-230ENST00000638016 CRTC3Q6UUV7 619 aa17.55■□□□□ 0.4
PNKP-230ENST00000638016 BZW1Q7L1Q6 419 aaKnown RBP17.55■□□□□ 0.4
PNKP-230ENST00000638016 RAB11FIP2Q7L804 512 aa17.55■□□□□ 0.4
PNKP-230ENST00000638016 LSMEM2Q8N112 164 aa17.55■□□□□ 0.4
PNKP-230ENST00000638016 ZNF248Q8NDW4 579 aa17.55■□□□□ 0.4
PNKP-230ENST00000638016 ACTL9Q8TC94 416 aa17.55■□□□□ 0.4
PNKP-230ENST00000638016 SLC37A2Q8TED4 501 aa17.55■□□□□ 0.4
PNKP-230ENST00000638016 OSBPL8Q9BZF1 889 aa17.55■□□□□ 0.4
PNKP-230ENST00000638016 OR2AG1Q9H205 316 aa17.55■□□□□ 0.4
PNKP-230ENST00000638016 PRORYQ9H606 182 aa17.55■□□□□ 0.4
PNKP-230ENST00000638016 THSD1Q9NS62 852 aa17.55■□□□□ 0.4
PNKP-230ENST00000638016 TMEM9Q9P0T7 183 aa17.55■□□□□ 0.4
PNKP-230ENST00000638016 VPS18Q9P253 973 aa17.55■□□□□ 0.4
PNKP-230ENST00000638016 TBC1D29Q9UFV1 150 aa17.55■□□□□ 0.4
PNKP-230ENST00000638016 RSPH14Q9UHP6 348 aa17.55■□□□□ 0.4
PNKP-230ENST00000638016 ADGRG1Q9Y653 693 aa17.55■□□□□ 0.4
PNKP-230ENST00000638016 BTNL10A8MVZ5 291 aa17.54■□□□□ 0.4
PNKP-230ENST00000638016 IPO7O95373 1038 aaKnown RBP17.54■□□□□ 0.4
PNKP-230ENST00000638016 PYGMP11217 842 aa17.54■□□□□ 0.4
PNKP-230ENST00000638016 MPSTP25325 297 aa17.54■□□□□ 0.4
PNKP-230ENST00000638016 CCKBRP32239 447 aa17.54■□□□□ 0.4
PNKP-230ENST00000638016 DCDC1P59894 354 aa17.54■□□□□ 0.4
PNKP-230ENST00000638016 CFHR1Q03591 330 aa17.54■□□□□ 0.4
PNKP-230ENST00000638016 PTPRCAPQ14761 206 aa17.54■□□□□ 0.4
PNKP-230ENST00000638016 NR1D2Q14995 579 aa17.54■□□□□ 0.4
PNKP-230ENST00000638016 C16orf72Q14CZ0 275 aa17.54■□□□□ 0.4
PNKP-230ENST00000638016 SOWAHCQ53LP3 525 aaPredicted RBP17.54■□□□□ 0.4
PNKP-230ENST00000638016 PHF19Q5T6S3 580 aa17.54■□□□□ 0.4
PNKP-230ENST00000638016 IGF2-ASQ6U949 168 aa17.54■□□□□ 0.4
PNKP-230ENST00000638016 ZNF574Q6ZN55 896 aaPredicted RBP17.54■□□□□ 0.4
PNKP-230ENST00000638016 ADGRG6Q86SQ4 1221 aa17.54■□□□□ 0.4
PNKP-230ENST00000638016 KIAA1328Q86T90 577 aa17.54■□□□□ 0.4
PNKP-230ENST00000638016 RAVER1Q8IY67 606 aaKnown RBP17.54■□□□□ 0.4
PNKP-230ENST00000638016 FBXO39Q8N4B4 442 aa17.54■□□□□ 0.4
PNKP-230ENST00000638016 TTC30BQ8N4P2 665 aa17.54■□□□□ 0.4
PNKP-230ENST00000638016 RCBTB1Q8NDN9 531 aa17.54■□□□□ 0.4
PNKP-230ENST00000638016 KCNE4Q8WWG9 221 aa17.54■□□□□ 0.4
PNKP-230ENST00000638016 GRAMD1AQ96CP6 724 aa17.54■□□□□ 0.4
PNKP-230ENST00000638016 FCRL5Q96RD9 977 aa17.54■□□□□ 0.4
PNKP-230ENST00000638016 CPNE5Q9HCH3 593 aa17.54■□□□□ 0.4
PNKP-230ENST00000638016 PISDQ9UG56 409 aa17.54■□□□□ 0.4
PNKP-230ENST00000638016 LOXL2Q9Y4K0 774 aa17.54■□□□□ 0.4
PNKP-230ENST00000638016 MGAQ8IWI9 3026 aa17.54■□□□□ 0.4
PNKP-230ENST00000638016 RGSL1A5PLK6 1076 aa17.53■□□□□ 0.4
PNKP-230ENST00000638016 KLK10O43240 276 aa17.53■□□□□ 0.4
PNKP-230ENST00000638016 NUAK1O60285 661 aa17.53■□□□□ 0.4
PNKP-230ENST00000638016 SNX2O60749 519 aa17.53■□□□□ 0.4
PNKP-230ENST00000638016 SLC25A14O95258 325 aaPredicted RBP17.53■□□□□ 0.4
PNKP-230ENST00000638016 FTCDO95954 541 aa17.53■□□□□ 0.4
PNKP-230ENST00000638016 CD1CP29017 333 aa17.53■□□□□ 0.4
PNKP-230ENST00000638016 BIRC2Q13490 618 aa17.53■□□□□ 0.4
PNKP-230ENST00000638016 CCDC181Q5TID7 509 aa17.53■□□□□ 0.4
PNKP-230ENST00000638016 MICALCLQ6ZW33 695 aa17.53■□□□□ 0.4
PNKP-230ENST00000638016 TRAM1L1Q8N609 369 aa17.53■□□□□ 0.4
PNKP-230ENST00000638016 BLOC1S5Q8TDH9 187 aa17.53■□□□□ 0.4
PNKP-230ENST00000638016 GLYATL1Q969I3 302 aa17.53■□□□□ 0.4
PNKP-230ENST00000638016 TMEM74Q96NL1 305 aa17.53■□□□□ 0.4
PNKP-230ENST00000638016 FCRL3Q96P31 734 aaPredicted RBP17.53■□□□□ 0.4
PNKP-230ENST00000638016 APOL2Q9BQE5 337 aa17.53■□□□□ 0.4
PNKP-230ENST00000638016 FICDQ9BVA6 458 aa17.53■□□□□ 0.4
PNKP-230ENST00000638016 NFKBIL1Q9UBC1 381 aaPredicted RBP17.53■□□□□ 0.4
PNKP-230ENST00000638016 SLC23A2Q9UGH3 650 aa17.53■□□□□ 0.4
PNKP-230ENST00000638016 A6NCN8 305 aa17.52■□□□□ 0.4
PNKP-230ENST00000638016 HACD1B0YJ81 288 aa17.52■□□□□ 0.4
PNKP-230ENST00000638016 MTSS1O43312 755 aa17.52■□□□□ 0.4
PNKP-230ENST00000638016 GRID2O43424 1007 aa17.52■□□□□ 0.4
PNKP-230ENST00000638016 AGTP01019 485 aa17.52■□□□□ 0.4
PNKP-230ENST00000638016 ITGA2BP08514 1039 aa17.52■□□□□ 0.4
PNKP-230ENST00000638016 PSMB4P28070 264 aa17.52■□□□□ 0.4
PNKP-230ENST00000638016 RWDD2BP57060 319 aa17.52■□□□□ 0.4
PNKP-230ENST00000638016 EIF3EP60228 445 aaKnown RBP17.52■□□□□ 0.4
PNKP-230ENST00000638016 COPS2P61201 443 aa17.52■□□□□ 0.4
PNKP-230ENST00000638016 CXADRP78310 365 aa17.52■□□□□ 0.4
PNKP-230ENST00000638016 SRSF6Q13247 344 aaKnown RBP17.52■□□□□ 0.4
PNKP-230ENST00000638016 LRP8Q14114 963 aa17.52■□□□□ 0.4
PNKP-230ENST00000638016 SLC1A5Q15758 541 aa17.52■□□□□ 0.4
PNKP-230ENST00000638016 ATP13A5Q4VNC0 1218 aa17.52■□□□□ 0.4
PNKP-230ENST00000638016 CCDC70Q6NSX1 233 aa17.52■□□□□ 0.4
PNKP-230ENST00000638016 CLEC14AQ86T13 490 aa17.52■□□□□ 0.4
PNKP-230ENST00000638016 JAMLQ86YT9 394 aa17.52■□□□□ 0.4
PNKP-230ENST00000638016 SFRP1Q8N474 314 aa17.52■□□□□ 0.4
PNKP-230ENST00000638016 ZSCAN5AQ9BUG6 496 aa17.52■□□□□ 0.4
PNKP-230ENST00000638016 STRADBQ9C0K7 418 aa17.52■□□□□ 0.4
PNKP-230ENST00000638016 GBA3Q9H227 469 aa17.52■□□□□ 0.4
PNKP-230ENST00000638016 CARD9Q9H257 536 aa17.52■□□□□ 0.4
PNKP-230ENST00000638016 PRDM8Q9NQV8 689 aa17.52■□□□□ 0.4
PNKP-230ENST00000638016 CAPN6Q9Y6Q1 641 aa17.52■□□□□ 0.4
PNKP-230ENST00000638016 IGHV1OR21-1A0A087WYE8 117 aa17.51■□□□□ 0.39
PNKP-230ENST00000638016 CCDC66A2RUB6 948 aa17.51■□□□□ 0.39
PNKP-230ENST00000638016 DDX3YO15523 660 aaKnown RBP17.51■□□□□ 0.39
PNKP-230ENST00000638016 CPNE6O95741 557 aa17.51■□□□□ 0.39
PNKP-230ENST00000638016 RBP3P10745 1247 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms