RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 C1QTNF5Q9BXJ0 243 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 AGXT2Q9BYV1 514 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 CSTL1Q9H114 145 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 UPF2Q9HAU5 1272 aaKnown RBP3.18□□□□□ -1.9
SRP54-214ENST00000630962 LRRC4Q9HBW1 653 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 SAGE1Q9NXZ1 904 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 EHD2Q9NZN4 543 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 ABI3Q9P2A4 366 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 FBXW11Q9UKB1 542 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 OR2W1Q9Y3N9 320 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 EIF4E1BA6NMX2 242 aaKnown RBP3.17□□□□□ -1.9
SRP54-214ENST00000630962 FAM90A26D6RGX4 464 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 H0YIN7 160 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 ANKRD28O15084 1053 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 HCRTR2O43614 444 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 GAS8-AS1O95177 125 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 DDX58O95786 925 aaKnown RBP3.17□□□□□ -1.9
SRP54-214ENST00000630962 HIST1H2ABP04908 130 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 TUBBP07437 444 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 CSF2RAP15509 400 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 TMEM11P17152 192 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 HIST1H2ADP20671 130 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 NR2F2P24468 414 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 ELF1P32519 619 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 TIMP3P35625 211 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 APOBEC1P41238 236 aaKnown RBP3.17□□□□□ -1.9
SRP54-214ENST00000630962 HARS2P49590 506 aaKnown RBP3.17□□□□□ -1.9
SRP54-214ENST00000630962 CRIP2P52943 208 aaPredicted RBP3.17□□□□□ -1.9
SRP54-214ENST00000630962 CTSCP53634 463 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 CASP6P55212 293 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 TUBB4BP68371 445 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 NIPAL4Q0D2K0 466 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 SREBF2Q12772 1141 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 TBX2Q13207 712 aaPredicted RBP3.17□□□□□ -1.9
SRP54-214ENST00000630962 ALG11Q2TAA5 492 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 CXorf66Q5JRM2 361 aaPredicted RBP3.17□□□□□ -1.9
SRP54-214ENST00000630962 SFMBT2Q5VUG0 894 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 OR7E24Q6IFN5 339 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 SARM1Q6SZW1 724 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 MMS22LQ6ZRQ5 1243 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 HIST3H2AQ7L7L0 130 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 R3HCC1LQ7Z5L2 792 aaKnown RBP3.17□□□□□ -1.9
SRP54-214ENST00000630962 TMPRSS12Q86WS5 348 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 NRROSQ86YC3 692 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 DIS3L2Q8IYB7 885 aaKnown RBP3.17□□□□□ -1.9
SRP54-214ENST00000630962 KBTBD3Q8NAB2 608 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 SLC24A4Q8NFF2 622 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 RRP36Q96EU6 259 aaKnown RBP3.17□□□□□ -1.9
SRP54-214ENST00000630962 MMABQ96EY8 250 aaPredicted RBP3.17□□□□□ -1.9
SRP54-214ENST00000630962 GRAMD2BQ96HH9 432 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 CCDC34Q96HJ3 373 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 ST6GAL2Q96JF0 529 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 PPM1MQ96MI6 270 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 LRMDAQ9H2I8 198 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 SLC28A3Q9HAS3 691 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 FAF1Q9UNN5 650 aaPredicted RBP3.17□□□□□ -1.9
SRP54-214ENST00000630962 NAALADL1Q9UQQ1 740 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 MTMR6Q9Y217 621 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 CAPN7Q9Y6W3 813 aa3.17□□□□□ -1.9
SRP54-214ENST00000630962 A0A0G2JLW4 131 aa3.16□□□□□ -1.9
SRP54-214ENST00000630962 CTAGE9A4FU28 777 aa3.16□□□□□ -1.9
SRP54-214ENST00000630962 PLEKHD1A6NEE1 506 aa3.16□□□□□ -1.9
SRP54-214ENST00000630962 MAP2K7O14733 419 aa3.16□□□□□ -1.9
SRP54-214ENST00000630962 EIF3DO15371 548 aaKnown RBP eCLIP3.16□□□□□ -1.9
SRP54-214ENST00000630962 PRKNO60260 465 aaPredicted RBP3.16□□□□□ -1.9
SRP54-214ENST00000630962 TMCC2O75069 709 aa3.16□□□□□ -1.9
SRP54-214ENST00000630962 NKX2-2O95096 273 aa3.16□□□□□ -1.9
SRP54-214ENST00000630962 CTAGE8P0CG41 777 aa3.16□□□□□ -1.9
SRP54-214ENST00000630962 ERVK11-1P61568 191 aa3.16□□□□□ -1.9
SRP54-214ENST00000630962 PRAMEP78395 509 aa3.16□□□□□ -1.9
SRP54-214ENST00000630962 TMEM115Q12893 351 aaPredicted RBP3.16□□□□□ -1.9
SRP54-214ENST00000630962 FRG1Q14331 258 aaKnown RBP3.16□□□□□ -1.9
SRP54-214ENST00000630962 CCDC96Q2M329 555 aa3.16□□□□□ -1.9
SRP54-214ENST00000630962 ZNF805Q5CZA5 627 aa3.16□□□□□ -1.9
SRP54-214ENST00000630962 FAM171BQ6P995 826 aa3.16□□□□□ -1.9
SRP54-214ENST00000630962 CEACAM20Q6UY09 585 aa3.16□□□□□ -1.9
SRP54-214ENST00000630962 EPHX4Q8IUS5 362 aa3.16□□□□□ -1.9
SRP54-214ENST00000630962 CTAGE4Q8IX94 777 aa3.16□□□□□ -1.9
SRP54-214ENST00000630962 CCDC13Q8IYE1 715 aa3.16□□□□□ -1.9
SRP54-214ENST00000630962 SRBD1Q8N5C6 995 aaKnown RBP3.16□□□□□ -1.9
SRP54-214ENST00000630962 PAF1Q8N7H5 531 aa3.16□□□□□ -1.9
SRP54-214ENST00000630962 TMEM116Q8NCL8 245 aa3.16□□□□□ -1.9
SRP54-214ENST00000630962 OR10V1Q8NGI7 309 aa3.16□□□□□ -1.9
SRP54-214ENST00000630962 OR1J2Q8NGS2 313 aa3.16□□□□□ -1.9
SRP54-214ENST00000630962 OR5R1Q8NH85 324 aa3.16□□□□□ -1.9
SRP54-214ENST00000630962 OR14L1PQ8NHC6 308 aa3.16□□□□□ -1.9
SRP54-214ENST00000630962 FAM76AQ8TAV0 307 aa3.16□□□□□ -1.9
SRP54-214ENST00000630962 UTP15Q8TED0 518 aaKnown RBP3.16□□□□□ -1.9
SRP54-214ENST00000630962 SLC38A5Q8WUX1 472 aa3.16□□□□□ -1.9
SRP54-214ENST00000630962 ARHGEF2Q92974 986 aaKnown RBP3.16□□□□□ -1.9
SRP54-214ENST00000630962 PHF21AQ96BD5 680 aa3.16□□□□□ -1.9
SRP54-214ENST00000630962 STAMBPL1Q96FJ0 436 aa3.16□□□□□ -1.9
SRP54-214ENST00000630962 C17orf77Q96MU5 243 aa3.16□□□□□ -1.9
SRP54-214ENST00000630962 F2RL3Q96RI0 385 aa3.16□□□□□ -1.9
SRP54-214ENST00000630962 ZBTB20Q9HC78 741 aaPredicted RBP3.16□□□□□ -1.9
SRP54-214ENST00000630962 MARCH4Q9P2E8 410 aaPredicted RBP3.16□□□□□ -1.9
SRP54-214ENST00000630962 COPG2Q9UBF2 871 aa3.16□□□□□ -1.9
SRP54-214ENST00000630962 LIMA1Q9UHB6 759 aaKnown RBP3.16□□□□□ -1.9
SRP54-214ENST00000630962 A0A1W2PPI3 338 aa3.15□□□□□ -1.91
SRP54-214ENST00000630962 OR5K3A6NET4 321 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms