RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 PLEKHG4BQ96PX9 1271 aa10.92□□□□□ -0.66
DDX41-218ENST00000625286 LYSMD1Q96S90 227 aa10.92□□□□□ -0.66
DDX41-218ENST00000625286 THAP2Q9H0W7 228 aa10.92□□□□□ -0.66
DDX41-218ENST00000625286 ANO10Q9NW15 660 aa10.92□□□□□ -0.66
DDX41-218ENST00000625286 RBM22Q9NW64 420 aaKnown RBP eCLIP10.92□□□□□ -0.66
DDX41-218ENST00000625286 ZNF624Q9P2J8 865 aaPredicted RBP10.92□□□□□ -0.66
DDX41-218ENST00000625286 ATXN10Q9UBB4 475 aa10.92□□□□□ -0.66
DDX41-218ENST00000625286 CPNE7Q9UBL6 633 aa10.92□□□□□ -0.66
DDX41-218ENST00000625286 TP53TG5Q9Y2B4 290 aa10.92□□□□□ -0.66
DDX41-218ENST00000625286 RPS6KL1Q9Y6S9 549 aa10.92□□□□□ -0.66
DDX41-218ENST00000625286 ITPR2Q14571 2701 aa10.92□□□□□ -0.66
DDX41-218ENST00000625286 MN1Q10571 1320 aaPredicted RBP10.91□□□□□ -0.66
DDX41-218ENST00000625286 POLR1CO15160 346 aaPredicted RBP10.91□□□□□ -0.66
DDX41-218ENST00000625286 MATN3O15232 486 aa10.91□□□□□ -0.66
DDX41-218ENST00000625286 NUAK1O60285 661 aa10.91□□□□□ -0.66
DDX41-218ENST00000625286 HLA-DQB2P05538 268 aa10.91□□□□□ -0.66
DDX41-218ENST00000625286 GP1BBP13224 206 aa10.91□□□□□ -0.66
DDX41-218ENST00000625286 F3P13726 295 aa10.91□□□□□ -0.66
DDX41-218ENST00000625286 BRAFP15056 766 aa10.91□□□□□ -0.66
DDX41-218ENST00000625286 SLC19A1P41440 591 aa10.91□□□□□ -0.66
DDX41-218ENST00000625286 LEPRP48357 1165 aaKnown RBP10.91□□□□□ -0.66
DDX41-218ENST00000625286 EPHA4P54764 986 aa10.91□□□□□ -0.66
DDX41-218ENST00000625286 MLLT10P55197 1068 aa10.91□□□□□ -0.66
DDX41-218ENST00000625286 KLHL30Q0D2K2 578 aa10.91□□□□□ -0.66
DDX41-218ENST00000625286 DPYSL3Q14195 570 aa10.91□□□□□ -0.66
DDX41-218ENST00000625286 PAFAH1B3Q15102 231 aaKnown RBP10.91□□□□□ -0.66
DDX41-218ENST00000625286 STX1AQ16623 288 aa10.91□□□□□ -0.66
DDX41-218ENST00000625286 CRTC2Q53ET0 693 aaPredicted RBP10.91□□□□□ -0.66
DDX41-218ENST00000625286 KDELC2Q7Z4H8 507 aa10.91□□□□□ -0.66
DDX41-218ENST00000625286 SLC9B2Q86UD5 537 aa10.91□□□□□ -0.66
DDX41-218ENST00000625286 BBS5Q8N3I7 341 aa10.91□□□□□ -0.66
DDX41-218ENST00000625286 PQLC3Q8N755 202 aa10.91□□□□□ -0.66
DDX41-218ENST00000625286 CNTD1Q8N815 330 aa10.91□□□□□ -0.66
DDX41-218ENST00000625286 NIPA2Q8N8Q9 360 aa10.91□□□□□ -0.66
DDX41-218ENST00000625286 LPCAT1Q8NF37 534 aa10.91□□□□□ -0.66
DDX41-218ENST00000625286 ANKRD20A12PQ8NF67 263 aa10.91□□□□□ -0.66
DDX41-218ENST00000625286 C9orf72Q96LT7 481 aa10.91□□□□□ -0.66
DDX41-218ENST00000625286 ZPBPQ9BS86 351 aa10.91□□□□□ -0.66
DDX41-218ENST00000625286 POLR1EQ9GZS1 481 aaKnown RBP10.91□□□□□ -0.66
DDX41-218ENST00000625286 BRD8Q9H0E9 1235 aa10.91□□□□□ -0.66
DDX41-218ENST00000625286 FAM83DQ9H4H8 585 aa10.91□□□□□ -0.66
DDX41-218ENST00000625286 AKIRIN1Q9H9L7 192 aaPredicted RBP10.91□□□□□ -0.66
DDX41-218ENST00000625286 TMPRSS11EQ9UL52 423 aa10.91□□□□□ -0.66
DDX41-218ENST00000625286 SCINQ9Y6U3 715 aa10.91□□□□□ -0.66
DDX41-218ENST00000625286 SPTBP11277 2137 aa10.9□□□□□ -0.66
DDX41-218ENST00000625286 CENPEQ02224 2701 aa10.9□□□□□ -0.66
DDX41-218ENST00000625286 KIR2DS5A0A0G2JLQ3 304 aa10.9□□□□□ -0.66
DDX41-218ENST00000625286 A0A0G2JNG1 304 aa10.9□□□□□ -0.66
DDX41-218ENST00000625286 KIR2DS3K7RE56 304 aa10.9□□□□□ -0.66
DDX41-218ENST00000625286 GRID2O43424 1007 aa10.9□□□□□ -0.66
DDX41-218ENST00000625286 TIAF1O95411 115 aa10.9□□□□□ -0.66
DDX41-218ENST00000625286 ANKRD34CP0C6C1 535 aa10.9□□□□□ -0.66
DDX41-218ENST00000625286 MYBL1P10243 752 aa10.9□□□□□ -0.66
DDX41-218ENST00000625286 TYRP1P17643 537 aa10.9□□□□□ -0.66
DDX41-218ENST00000625286 XRCC1P18887 633 aaPredicted RBP10.9□□□□□ -0.66
DDX41-218ENST00000625286 TCN2P20062 427 aa10.9□□□□□ -0.66
DDX41-218ENST00000625286 NFKBIAP25963 317 aa10.9□□□□□ -0.66
DDX41-218ENST00000625286 CD97P48960 835 aa10.9□□□□□ -0.66
DDX41-218ENST00000625286 PPM1FP49593 454 aaPredicted RBP10.9□□□□□ -0.66
DDX41-218ENST00000625286 EPHB1P54762 984 aa10.9□□□□□ -0.66
DDX41-218ENST00000625286 GBE1Q04446 702 aa10.9□□□□□ -0.66
DDX41-218ENST00000625286 ERV3-1Q14264 604 aa10.9□□□□□ -0.66
DDX41-218ENST00000625286 PIGHQ14442 188 aaPredicted RBP10.9□□□□□ -0.66
DDX41-218ENST00000625286 KIR2DS5Q14953 304 aa10.9□□□□□ -0.66
DDX41-218ENST00000625286 KHDC1Q4VXA5 237 aaKnown RBP10.9□□□□□ -0.66
DDX41-218ENST00000625286 LACTB2Q53H82 288 aaPredicted RBP10.9□□□□□ -0.66
DDX41-218ENST00000625286 SASS6Q6UVJ0 657 aa10.9□□□□□ -0.66
DDX41-218ENST00000625286 ADGRG6Q86SQ4 1221 aa10.9□□□□□ -0.66
DDX41-218ENST00000625286 ZNF547Q8IVP9 402 aa10.9□□□□□ -0.66
DDX41-218ENST00000625286 GALNT6Q8NCL4 622 aa10.9□□□□□ -0.66
DDX41-218ENST00000625286 GPR26Q8NDV2 337 aa10.9□□□□□ -0.66
DDX41-218ENST00000625286 NSMCE1Q8WV22 266 aa10.9□□□□□ -0.66
DDX41-218ENST00000625286 KIAA1143Q96AT1 154 aaPredicted RBP10.9□□□□□ -0.66
DDX41-218ENST00000625286 ELMO2Q96JJ3 720 aa10.9□□□□□ -0.66
DDX41-218ENST00000625286 TSGA13Q96PP4 275 aa10.9□□□□□ -0.66
DDX41-218ENST00000625286 RUFY1Q96T51 708 aa10.9□□□□□ -0.66
DDX41-218ENST00000625286 OR2AG1Q9H205 316 aa10.9□□□□□ -0.66
DDX41-218ENST00000625286 PCDH9Q9HC56 1237 aa10.9□□□□□ -0.66
DDX41-218ENST00000625286 MRPL47Q9HD33 250 aaKnown RBP10.9□□□□□ -0.66
DDX41-218ENST00000625286 KLC4Q9NSK0 619 aa10.9□□□□□ -0.66
DDX41-218ENST00000625286 CROTQ9UKG9 612 aa10.9□□□□□ -0.66
DDX41-218ENST00000625286 SHANK1Q9Y566 2161 aa10.9□□□□□ -0.66
DDX41-218ENST00000625286 C1orf232A0A0U1RR37 186 aa10.89□□□□□ -0.67
DDX41-218ENST00000625286 BLACEA4D250 179 aa10.89□□□□□ -0.67
DDX41-218ENST00000625286 LILRA5A6NI73 299 aa10.89□□□□□ -0.67
DDX41-218ENST00000625286 ANKRD66B4E2M5 251 aa10.89□□□□□ -0.67
DDX41-218ENST00000625286 CHUKO15111 745 aa10.89□□□□□ -0.67
DDX41-218ENST00000625286 CYP1A2P05177 515 aa10.89□□□□□ -0.67
DDX41-218ENST00000625286 PYGLP06737 847 aa10.89□□□□□ -0.67
DDX41-218ENST00000625286 CCNCP24863 283 aa10.89□□□□□ -0.67
DDX41-218ENST00000625286 SERPINB6P35237 376 aa10.89□□□□□ -0.67
DDX41-218ENST00000625286 DLSTP36957 453 aa10.89□□□□□ -0.67
DDX41-218ENST00000625286 UQCRFS1P47985 274 aa10.89□□□□□ -0.67
DDX41-218ENST00000625286 SEPHS1P49903 392 aa10.89□□□□□ -0.67
DDX41-218ENST00000625286 ZNF165P49910 485 aa10.89□□□□□ -0.67
DDX41-218ENST00000625286 CLCNKAP51800 687 aa10.89□□□□□ -0.67
DDX41-218ENST00000625286 TAS2R40P59535 323 aa10.89□□□□□ -0.67
DDX41-218ENST00000625286 PPP1CAP62136 330 aa10.89□□□□□ -0.67
DDX41-218ENST00000625286 FOXM1Q08050 763 aa10.89□□□□□ -0.67
DDX41-218ENST00000625286 MAP7Q14244 749 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms