RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 ERGIC3Q9Y282 383 aa19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 UPK1AO00322 258 aa19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 LDB2O43679 373 aa19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 SLC2A3P11169 496 aa19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 HTR1EP28566 365 aa19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 CCR1P32246 355 aa19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 AFF1P51825 1210 aaKnown RBP19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 OR4D2P58180 307 aa19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 UFM1P61960 85 aa19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 ITKQ08881 620 aa19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 LCP2Q13094 533 aa19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 TUBA3CQ13748 450 aa19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 SIRPB2Q5JXA9 342 aa19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 OTUD3Q5T2D3 398 aaPredicted RBP19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 LRRC49Q8IUZ0 686 aa19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 TMEM199Q8N511 208 aa19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 RNF145Q96MT1 663 aa19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 LHPPQ9H008 270 aa19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 ARMC7Q9H6L4 198 aa19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 INTS7Q9NVH2 962 aaKnown RBP19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 CFAP99D6REC4 459 aa19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 SYNCRIPO60506 623 aaKnown RBP19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 CLPXO76031 633 aa19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 F2P00734 622 aa19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 EEF1DP29692 281 aaKnown RBP19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 PGFP49763 221 aa19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 GSTM4Q03013 218 aa19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 TMEM214Q6NUQ4 689 aaKnown RBP19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 BEND5Q7L4P6 421 aa19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 ZNF467Q7Z7K2 595 aaPredicted RBP19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 GPC2Q8N158 579 aa19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 BPIFB6Q8NFQ5 453 aa19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 RAB2BQ8WUD1 216 aa19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 CASP10Q92851 521 aa19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 TBATAQ96M53 351 aa19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 KLHL5Q96PQ7 755 aa19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 LEF1Q9UJU2 399 aaPredicted RBP19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 PSME2Q9UL46 239 aa19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 B3GNT3Q9Y2A9 372 aa19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 TIMM22Q9Y584 194 aa19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 HS3ST4Q9Y661 456 aa19.46■□□□□ 0.71
PDLIM3-212ENST00000620787 NLRC5Q86WI3 1866 aa19.45■□□□□ 0.7
PDLIM3-212ENST00000620787 TYW5A2RUC4 315 aaKnown RBP19.45■□□□□ 0.7
PDLIM3-212ENST00000620787 CCDC154A6NI56 674 aa19.45■□□□□ 0.7
PDLIM3-212ENST00000620787 J3KR12 359 aa19.45■□□□□ 0.7
PDLIM3-212ENST00000620787 ABCB7O75027 752 aa19.45■□□□□ 0.7
PDLIM3-212ENST00000620787 ADAM23O75077 832 aa19.45■□□□□ 0.7
PDLIM3-212ENST00000620787 MOCS2O96007 188 aaPredicted RBP19.45■□□□□ 0.7
PDLIM3-212ENST00000620787 PCSK1P29120 753 aa19.45■□□□□ 0.7
PDLIM3-212ENST00000620787 ARSFP54793 590 aa19.45■□□□□ 0.7
PDLIM3-212ENST00000620787 ADAM17P78536 824 aa19.45■□□□□ 0.7
PDLIM3-212ENST00000620787 SLC10A7Q0GE19 358 aa19.45■□□□□ 0.7
PDLIM3-212ENST00000620787 SEMA3AQ14563 771 aa19.45■□□□□ 0.7
PDLIM3-212ENST00000620787 CRY1Q16526 586 aa19.45■□□□□ 0.7
PDLIM3-212ENST00000620787 GTF2IRD2BQ6EKJ0 949 aa19.45■□□□□ 0.7
PDLIM3-212ENST00000620787 NCCRP1Q6ZVX7 275 aaPredicted RBP19.45■□□□□ 0.7
PDLIM3-212ENST00000620787 DEFB132Q7Z7B7 95 aa19.45■□□□□ 0.7
PDLIM3-212ENST00000620787 GTF2IRD2Q86UP8 949 aa19.45■□□□□ 0.7
PDLIM3-212ENST00000620787 PROSER1Q86XN7 944 aa19.45■□□□□ 0.7
PDLIM3-212ENST00000620787 BRINP2Q9C0B6 783 aa19.45■□□□□ 0.7
PDLIM3-212ENST00000620787 SMOC2Q9H3U7 446 aa19.45■□□□□ 0.7
PDLIM3-212ENST00000620787 TFB2MQ9H5Q4 396 aaKnown RBP19.45■□□□□ 0.7
PDLIM3-212ENST00000620787 PIF1Q9H611 641 aa19.45■□□□□ 0.7
PDLIM3-212ENST00000620787 SEMA4BQ9NPR2 832 aaPredicted RBP19.45■□□□□ 0.7
PDLIM3-212ENST00000620787 MYO16Q9Y6X6 1858 aa19.45■□□□□ 0.7
PDLIM3-212ENST00000620787 TREHO43280 583 aa19.44■□□□□ 0.7
PDLIM3-212ENST00000620787 ESRRBO95718 433 aa19.44■□□□□ 0.7
PDLIM3-212ENST00000620787 RENBPP51606 427 aa19.44■□□□□ 0.7
PDLIM3-212ENST00000620787 ALDH3A2P51648 485 aa19.44■□□□□ 0.7
PDLIM3-212ENST00000620787 EMX2Q04743 252 aa19.44■□□□□ 0.7
PDLIM3-212ENST00000620787 GRIK2Q13002 908 aa19.44■□□□□ 0.7
PDLIM3-212ENST00000620787 POLD3Q15054 466 aaPredicted RBP19.44■□□□□ 0.7
PDLIM3-212ENST00000620787 RGS21Q2M5E4 152 aa19.44■□□□□ 0.7
PDLIM3-212ENST00000620787 GPRC5AQ8NFJ5 357 aa19.44■□□□□ 0.7
PDLIM3-212ENST00000620787 POPDC3Q9HBV1 291 aa19.44■□□□□ 0.7
PDLIM3-212ENST00000620787 TMLHEQ9NVH6 421 aa19.44■□□□□ 0.7
PDLIM3-212ENST00000620787 WDR37Q9Y2I8 494 aa19.44■□□□□ 0.7
PDLIM3-212ENST00000620787 PRSS23O95084 383 aa19.44■□□□□ 0.7
PDLIM3-212ENST00000620787 GOT2P00505 430 aaKnown RBP19.44■□□□□ 0.7
PDLIM3-212ENST00000620787 ATXN1LP0C7T5 689 aaKnown RBP19.44■□□□□ 0.7
PDLIM3-212ENST00000620787 CDH1P12830 882 aa19.44■□□□□ 0.7
PDLIM3-212ENST00000620787 TCF3P15923 654 aa19.44■□□□□ 0.7
PDLIM3-212ENST00000620787 CASP2P42575 452 aa19.44■□□□□ 0.7
PDLIM3-212ENST00000620787 POLR2JP52435 117 aaKnown RBP19.44■□□□□ 0.7
PDLIM3-212ENST00000620787 IGFN1Q86VF2 1251 aa19.44■□□□□ 0.7
PDLIM3-212ENST00000620787 SGCDQ92629 289 aa19.44■□□□□ 0.7
PDLIM3-212ENST00000620787 ISG20Q96AZ6 181 aaKnown RBP19.44■□□□□ 0.7
PDLIM3-212ENST00000620787 TRIM62Q9BVG3 475 aa19.44■□□□□ 0.7
PDLIM3-212ENST00000620787 WASH4PA8MWX3 477 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 SUPT3HB4E1H0 165 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 SLC22A3O75751 556 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 RSL1D1O76021 490 aaKnown RBP19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 KCNH1O95259 989 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 ALPLP05186 524 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 CDH3P22223 829 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 CRHBPP24387 322 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 IL12AP29459 219 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 ACVR1Q04771 509 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 DAG1Q14118 895 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 PTPRCAPQ14761 206 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms