RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 MTFR2Q6P444 385 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 TTC39CQ8N584 583 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 RNASE11Q8TAA1 199 aaKnown RBP5.01□□□□□ -1.61
VPS13D-214ENST00000620676 KAT2AQ92830 837 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 PFDN5Q99471 154 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 GATA5Q9BWX5 397 aaPredicted RBP5.01□□□□□ -1.61
VPS13D-214ENST00000620676 GTPBP2Q9BX10 602 aaKnown RBP5.01□□□□□ -1.61
VPS13D-214ENST00000620676 MAST1Q9Y2H9 1570 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 GNG14A0A1W2PPG7 69 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 PROM1O43490 865 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 VIPP01282 170 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 RBP1P09455 135 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 GRIA1P42261 906 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 CDH18Q13634 790 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 CAMK1Q14012 370 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 COL9A2Q14055 689 aaPredicted RBP5.01□□□□□ -1.61
VPS13D-214ENST00000620676 STILQ15468 1287 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 HYAL4Q2M3T9 481 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 ASTE1Q2TB18 679 aaPredicted RBP5.01□□□□□ -1.61
VPS13D-214ENST00000620676 SPATA20Q8TB22 786 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 HAS1Q92839 578 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 NSUN4Q96CB9 384 aaKnown RBP5.01□□□□□ -1.61
VPS13D-214ENST00000620676 FRMD6Q96NE9 622 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 NT5C1AQ9BXI3 368 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 TTYH3Q9C0H2 523 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 ASF1AQ9Y294 204 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 TESMINQ9Y4I5 508 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 hCG_1984214I3L0E3 225 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 DYRK3O43781 588 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 CYP2C18P33260 490 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 NFATC4Q14934 902 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 GPR156Q8NFN8 814 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 FRS2Q8WU20 508 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 MUS81Q96NY9 551 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 MAFFQ9ULX9 164 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 SCAMP2O15127 329 aaKnown RBP5.01□□□□□ -1.61
VPS13D-214ENST00000620676 CKMT1AP12532 417 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 LHCGRP22888 699 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 CD151P48509 253 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 TMBIM1Q969X1 311 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 MYLPFQ96A32 169 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 RBM4BQ9BQ04 359 aaKnown RBP5.01□□□□□ -1.61
VPS13D-214ENST00000620676 RBM4Q9BWF3 364 aaKnown RBP5.01□□□□□ -1.61
VPS13D-214ENST00000620676 RGS18Q9NS28 235 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 ZDHHC2Q9UIJ5 367 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 MGAT4AQ9UM21 535 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 ZNF451Q9Y4E5 1061 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 MLH3Q9UHC1 1453 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 TGDSO95455 350 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 GADD45AP24522 165 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 YWHAQP27348 245 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 SDC2P34741 201 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 ENPEPQ07075 957 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 USP30Q70CQ3 517 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 TFAP2DQ7Z6R9 452 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 LRRC15Q8TF66 581 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 SH3YL1Q96HL8 342 aaPredicted RBP5.01□□□□□ -1.61
VPS13D-214ENST00000620676 KCNE2Q9Y6J6 123 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 OAS3Q9Y6K5 1087 aaKnown RBP5.01□□□□□ -1.61
VPS13D-214ENST00000620676 RNF17Q9BXT8 1623 aaKnown RBP5.01□□□□□ -1.61
VPS13D-214ENST00000620676 ARHGEF33A8MVX0 844 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 MAGEB2O15479 319 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 ITGB3P05106 788 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 S100A2P29034 98 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 RHBDL3P58872 404 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 STX4Q12846 297 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 USP43Q70EL4 1123 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 ADCK2Q7Z695 626 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 FAM71AQ8IYT1 594 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 FIBCD1Q8N539 461 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 CD300LFQ8TDQ1 290 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 C11orf24Q96F05 449 aaPredicted RBP5.01□□□□□ -1.61
VPS13D-214ENST00000620676 C8orf48Q96LL4 319 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 TCRBV5S4A2TA0A5A2 114 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 NPPAP01160 153 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 MLNP12872 115 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 SLC38A6Q8IZM9 456 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 LPCAT1Q8NF37 534 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 LPIN3Q9BQK8 851 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 ACAD9Q9H845 621 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 LRRC40Q9H9A6 602 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 BPIFA1Q9NP55 256 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 ANKMY1Q9P2S6 941 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 TRPC4Q9UBN4 977 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 PHF11Q9UIL8 331 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 PCDHB3Q9Y5E6 796 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 BCLAF3A2AJT9 711 aaKnown RBP5.01□□□□□ -1.61
VPS13D-214ENST00000620676 SLITRK3O94933 977 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 CNTFP26441 200 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 TAF13Q15543 124 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 NAPRTQ6XQN6 538 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 FAM109AQ8N4B1 249 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 OR10A6Q8NH74 314 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 MTMR9Q96QG7 549 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 TMEM185BQ9H7F4 350 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 AAASQ9NRG9 546 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 MKLN1Q9UL63 735 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 MGAT4BQ9UQ53 548 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 HCN4Q9Y3Q4 1203 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 MAGED1Q9Y5V3 778 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms