RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 ZNF567Q8N184 647 aa16.99■□□□□ 0.31
HMGN3-203ENST00000620514 SLC37A2Q8TED4 501 aa16.99■□□□□ 0.31
HMGN3-203ENST00000620514 OXNAD1Q96HP4 312 aaPredicted RBP16.99■□□□□ 0.31
HMGN3-203ENST00000620514 RBM41Q96IZ5 413 aaKnown RBP16.99■□□□□ 0.31
HMGN3-203ENST00000620514 OR2AG1Q9H205 316 aa16.99■□□□□ 0.31
HMGN3-203ENST00000620514 BPIFA1Q9NP55 256 aa16.99■□□□□ 0.31
HMGN3-203ENST00000620514 LUC7LQ9NQ29 371 aaKnown RBP16.99■□□□□ 0.31
HMGN3-203ENST00000620514 KLHL8Q9P2G9 620 aaPredicted RBP16.99■□□□□ 0.31
HMGN3-203ENST00000620514 TBC1D29Q9UFV1 150 aa16.99■□□□□ 0.31
HMGN3-203ENST00000620514 FAM153AQ9UHL3 310 aa16.99■□□□□ 0.31
HMGN3-203ENST00000620514 SSUH2Q9Y2M2 353 aa16.99■□□□□ 0.31
HMGN3-203ENST00000620514 PCDHGA7Q9Y5G6 932 aa16.99■□□□□ 0.31
HMGN3-203ENST00000620514 IGHV1OR21-1A0A087WYE8 117 aa16.98■□□□□ 0.31
HMGN3-203ENST00000620514 LOC285095A0A1B0GVY8 99 aa16.98■□□□□ 0.31
HMGN3-203ENST00000620514 GRID2O43424 1007 aa16.98■□□□□ 0.31
HMGN3-203ENST00000620514 NUAK1O60285 661 aa16.98■□□□□ 0.31
HMGN3-203ENST00000620514 SNX2O60749 519 aa16.98■□□□□ 0.31
HMGN3-203ENST00000620514 SLC25A14O95258 325 aaPredicted RBP16.98■□□□□ 0.31
HMGN3-203ENST00000620514 CSF2RBP32927 897 aa16.98■□□□□ 0.31
HMGN3-203ENST00000620514 CHRNA4P43681 627 aa16.98■□□□□ 0.31
HMGN3-203ENST00000620514 MAPK10P53779 464 aa16.98■□□□□ 0.31
HMGN3-203ENST00000620514 DCDC1P59894 354 aa16.98■□□□□ 0.31
HMGN3-203ENST00000620514 CFHR1Q03591 330 aa16.98■□□□□ 0.31
HMGN3-203ENST00000620514 PPP2R5EQ16537 467 aa16.98■□□□□ 0.31
HMGN3-203ENST00000620514 BBS12Q6ZW61 710 aa16.98■□□□□ 0.31
HMGN3-203ENST00000620514 PID1Q7Z2X4 250 aa16.98■□□□□ 0.31
HMGN3-203ENST00000620514 ADGRG6Q86SQ4 1221 aa16.98■□□□□ 0.31
HMGN3-203ENST00000620514 TMTC1Q8IUR5 882 aa16.98■□□□□ 0.31
HMGN3-203ENST00000620514 SFRP1Q8N474 314 aa16.98■□□□□ 0.31
HMGN3-203ENST00000620514 SLC25A41Q8N5S1 370 aa16.98■□□□□ 0.31
HMGN3-203ENST00000620514 TRAM1L1Q8N609 369 aa16.98■□□□□ 0.31
HMGN3-203ENST00000620514 RCBTB1Q8NDN9 531 aa16.98■□□□□ 0.31
HMGN3-203ENST00000620514 ACRBPQ8NEB7 543 aa16.98■□□□□ 0.31
HMGN3-203ENST00000620514 HTR3CQ8WXA8 447 aa16.98■□□□□ 0.31
HMGN3-203ENST00000620514 CCDC97Q96F63 343 aaPredicted RBP16.98■□□□□ 0.31
HMGN3-203ENST00000620514 ZSCAN5AQ9BUG6 496 aa16.98■□□□□ 0.31
HMGN3-203ENST00000620514 CARD9Q9H257 536 aa16.98■□□□□ 0.31
HMGN3-203ENST00000620514 RMI1Q9H9A7 625 aa16.98■□□□□ 0.31
HMGN3-203ENST00000620514 KCNK4Q9NYG8 393 aa16.98■□□□□ 0.31
HMGN3-203ENST00000620514 TMEM9Q9P0T7 183 aa16.98■□□□□ 0.31
HMGN3-203ENST00000620514 NFKBIL1Q9UBC1 381 aaPredicted RBP16.98■□□□□ 0.31
HMGN3-203ENST00000620514 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.98■□□□□ 0.31
HMGN3-203ENST00000620514 ADGRG1Q9Y653 693 aa16.98■□□□□ 0.31
HMGN3-203ENST00000620514 ATRXP46100 2492 aa16.97■□□□□ 0.31
HMGN3-203ENST00000620514 IGHV5-10-1A0A0J9YXX1 117 aa16.97■□□□□ 0.31
HMGN3-203ENST00000620514 MTSS1O43312 755 aa16.97■□□□□ 0.31
HMGN3-203ENST00000620514 MTX2O75431 263 aa16.97■□□□□ 0.31
HMGN3-203ENST00000620514 PRB1P04280 392 aa16.97■□□□□ 0.31
HMGN3-203ENST00000620514 MPSTP25325 297 aa16.97■□□□□ 0.31
HMGN3-203ENST00000620514 CTNNA1P35221 906 aaKnown RBP16.97■□□□□ 0.31
HMGN3-203ENST00000620514 FASLGP48023 281 aa16.97■□□□□ 0.31
HMGN3-203ENST00000620514 UCNP55089 124 aa16.97■□□□□ 0.31
HMGN3-203ENST00000620514 TGIF1Q15583 401 aa16.97■□□□□ 0.31
HMGN3-203ENST00000620514 SIRPB2Q5JXA9 342 aa16.97■□□□□ 0.31
HMGN3-203ENST00000620514 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.97■□□□□ 0.31
HMGN3-203ENST00000620514 CRTC3Q6UUV7 619 aa16.97■□□□□ 0.31
HMGN3-203ENST00000620514 USP7Q93009 1102 aa16.97■□□□□ 0.31
HMGN3-203ENST00000620514 GLYATL1Q969I3 302 aa16.97■□□□□ 0.31
HMGN3-203ENST00000620514 MRGPRX2Q96LB1 330 aa16.97■□□□□ 0.31
HMGN3-203ENST00000620514 CCDC74BQ96LY2 380 aa16.97■□□□□ 0.31
HMGN3-203ENST00000620514 FCRL5Q96RD9 977 aa16.97■□□□□ 0.31
HMGN3-203ENST00000620514 CMKLR1Q99788 373 aa16.97■□□□□ 0.31
HMGN3-203ENST00000620514 LACRTQ9GZZ8 138 aa16.97■□□□□ 0.31
HMGN3-203ENST00000620514 TRIM39Q9HCM9 518 aa16.97■□□□□ 0.31
HMGN3-203ENST00000620514 RAD18Q9NS91 495 aa16.97■□□□□ 0.31
HMGN3-203ENST00000620514 WDR70Q9NW82 654 aa16.97■□□□□ 0.31
HMGN3-203ENST00000620514 FOXJ2Q9P0K8 574 aa16.97■□□□□ 0.31
HMGN3-203ENST00000620514 TMPRSS11EQ9UL52 423 aa16.97■□□□□ 0.31
HMGN3-203ENST00000620514 PCDHA3Q9Y5H8 950 aa16.97■□□□□ 0.31
HMGN3-203ENST00000620514 PRAMEF33A0A0G2JMD5 474 aa16.96■□□□□ 0.31
HMGN3-203ENST00000620514 TEX51A0A1B0GUA7 166 aa16.96■□□□□ 0.31
HMGN3-203ENST00000620514 A6NCN8 305 aa16.96■□□□□ 0.31
HMGN3-203ENST00000620514 HACD1B0YJ81 288 aa16.96■□□□□ 0.31
HMGN3-203ENST00000620514 H7C0C1 242 aa16.96■□□□□ 0.31
HMGN3-203ENST00000620514 ZW10O43264 779 aa16.96■□□□□ 0.31
HMGN3-203ENST00000620514 PRAMEF10O60809 474 aa16.96■□□□□ 0.31
HMGN3-203ENST00000620514 CCL4P13236 92 aa16.96■□□□□ 0.31
HMGN3-203ENST00000620514 RBL1P28749 1068 aa16.96■□□□□ 0.31
HMGN3-203ENST00000620514 ATP5OP48047 213 aa16.96■□□□□ 0.31
HMGN3-203ENST00000620514 LIMK2P53671 638 aa16.96■□□□□ 0.31
HMGN3-203ENST00000620514 NAP1L1P55209 391 aaKnown RBP16.96■□□□□ 0.31
HMGN3-203ENST00000620514 CLPPQ16740 277 aaPredicted RBP16.96■□□□□ 0.31
HMGN3-203ENST00000620514 PLA2G4EQ3MJ16 856 aa16.96■□□□□ 0.31
HMGN3-203ENST00000620514 KHDC1Q4VXA5 237 aaKnown RBP16.96■□□□□ 0.31
HMGN3-203ENST00000620514 AADACL2Q6P093 401 aa16.96■□□□□ 0.31
HMGN3-203ENST00000620514 IYDQ6PHW0 289 aa16.96■□□□□ 0.31
HMGN3-203ENST00000620514 TTC30BQ8N4P2 665 aa16.96■□□□□ 0.31
HMGN3-203ENST00000620514 IPMKQ8NFU5 416 aa16.96■□□□□ 0.31
HMGN3-203ENST00000620514 TMEM159Q96B96 161 aa16.96■□□□□ 0.31
HMGN3-203ENST00000620514 VAT1Q99536 393 aa16.96■□□□□ 0.31
HMGN3-203ENST00000620514 SLC38A3Q99624 504 aa16.96■□□□□ 0.31
HMGN3-203ENST00000620514 FAM118BQ9BPY3 351 aa16.96■□□□□ 0.31
HMGN3-203ENST00000620514 PRDM8Q9NQV8 689 aa16.96■□□□□ 0.31
HMGN3-203ENST00000620514 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.96■□□□□ 0.31
HMGN3-203ENST00000620514 SLC23A2Q9UGH3 650 aa16.96■□□□□ 0.31
HMGN3-203ENST00000620514 RSPH14Q9UHP6 348 aa16.96■□□□□ 0.31
HMGN3-203ENST00000620514 BPTFQ12830 3046 aa16.96■□□□□ 0.3
HMGN3-203ENST00000620514 C9orf172C9J069 976 aa16.95■□□□□ 0.3
HMGN3-203ENST00000620514 APOC4-APOC2K7ER74 178 aa16.95■□□□□ 0.3
HMGN3-203ENST00000620514 ATXN7O15265 892 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms