RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 ZNF106Q9H2Y7 1883 aaKnown RBP15.86■□□□□ 0.13
BRCA1-228ENST00000618469 ATMQ13315 3056 aa15.85■□□□□ 0.13
BRCA1-228ENST00000618469 MT-CO3P00414 261 aa15.85■□□□□ 0.13
BRCA1-228ENST00000618469 ADCY8P40145 1251 aa15.85■□□□□ 0.13
BRCA1-228ENST00000618469 GDF10P55107 478 aa15.85■□□□□ 0.13
BRCA1-228ENST00000618469 CTBSQ01459 385 aa15.85■□□□□ 0.13
BRCA1-228ENST00000618469 OLIG2Q13516 323 aa15.85■□□□□ 0.13
BRCA1-228ENST00000618469 SFTPA2Q8IWL1 248 aa15.85■□□□□ 0.13
BRCA1-228ENST00000618469 TTC30BQ8N4P2 665 aa15.85■□□□□ 0.13
BRCA1-228ENST00000618469 TRAM1L1Q8N609 369 aa15.85■□□□□ 0.13
BRCA1-228ENST00000618469 SLC35B2Q8TB61 432 aa15.85■□□□□ 0.13
BRCA1-228ENST00000618469 GPBAR1Q8TDU6 330 aa15.85■□□□□ 0.13
BRCA1-228ENST00000618469 CCDC74AQ96AQ1 378 aa15.85■□□□□ 0.13
BRCA1-228ENST00000618469 APOL2Q9BQE5 337 aa15.85■□□□□ 0.13
BRCA1-228ENST00000618469 CCDC3Q9BQI4 270 aa15.85■□□□□ 0.13
BRCA1-228ENST00000618469 TMEM121Q9BTD3 319 aa15.85■□□□□ 0.13
BRCA1-228ENST00000618469 SEMA4CQ9C0C4 833 aa15.85■□□□□ 0.13
BRCA1-228ENST00000618469 ARFGAP3Q9NP61 516 aa15.85■□□□□ 0.13
BRCA1-228ENST00000618469 HACD3Q9P035 362 aa15.85■□□□□ 0.13
BRCA1-228ENST00000618469 VPS18Q9P253 973 aa15.85■□□□□ 0.13
BRCA1-228ENST00000618469 CNOT6Q9ULM6 557 aaKnown RBP15.85■□□□□ 0.13
BRCA1-228ENST00000618469 AAR2Q9Y312 384 aaKnown RBP15.85■□□□□ 0.13
BRCA1-228ENST00000618469 ZFC3H1O60293 1989 aaKnown RBP15.85■□□□□ 0.13
BRCA1-228ENST00000618469 MAST4O15021 2626 aa15.84■□□□□ 0.13
BRCA1-228ENST00000618469 NOBOXO60393 691 aa15.84■□□□□ 0.13
BRCA1-228ENST00000618469 AGTP01019 485 aa15.84■□□□□ 0.13
BRCA1-228ENST00000618469 HMGCLP35914 325 aa15.84■□□□□ 0.13
BRCA1-228ENST00000618469 ACTR1BP42025 376 aa15.84■□□□□ 0.13
BRCA1-228ENST00000618469 ACTR1AP61163 376 aa15.84■□□□□ 0.13
BRCA1-228ENST00000618469 TLE3Q04726 772 aa15.84■□□□□ 0.13
BRCA1-228ENST00000618469 LY6DQ14210 128 aa15.84■□□□□ 0.13
BRCA1-228ENST00000618469 C14orf28Q4W4Y0 310 aa15.84■□□□□ 0.13
BRCA1-228ENST00000618469 PYCR3Q53H96 274 aa15.84■□□□□ 0.13
BRCA1-228ENST00000618469 NRROSQ86YC3 692 aa15.84■□□□□ 0.13
BRCA1-228ENST00000618469 SLC13A5Q86YT5 568 aaPredicted RBP15.84■□□□□ 0.13
BRCA1-228ENST00000618469 PHYKPLQ8IUZ5 450 aa15.84■□□□□ 0.13
BRCA1-228ENST00000618469 SPACA3Q8IXA5 215 aa15.84■□□□□ 0.13
BRCA1-228ENST00000618469 DCBLD1Q8N8Z6 715 aa15.84■□□□□ 0.13
BRCA1-228ENST00000618469 GPR156Q8NFN8 814 aa15.84■□□□□ 0.13
BRCA1-228ENST00000618469 TRIM58Q8NG06 486 aa15.84■□□□□ 0.13
BRCA1-228ENST00000618469 ZDHHC1Q8WTX9 485 aa15.84■□□□□ 0.13
BRCA1-228ENST00000618469 FGF11Q92914 225 aa15.84■□□□□ 0.13
BRCA1-228ENST00000618469 SCARF2Q96GP6 870 aaPredicted RBP15.84■□□□□ 0.13
BRCA1-228ENST00000618469 PPP1R2P1Q96PQ5 205 aa15.84■□□□□ 0.13
BRCA1-228ENST00000618469 PLEKHG4BQ96PX9 1271 aa15.84■□□□□ 0.13
BRCA1-228ENST00000618469 DEPDC7Q96QD5 511 aa15.84■□□□□ 0.13
BRCA1-228ENST00000618469 CARD9Q9H257 536 aa15.84■□□□□ 0.13
BRCA1-228ENST00000618469 CPNE5Q9HCH3 593 aa15.84■□□□□ 0.13
BRCA1-228ENST00000618469 TAAR2Q9P1P5 351 aa15.84■□□□□ 0.13
BRCA1-228ENST00000618469 PRKAB1Q9Y478 270 aa15.84■□□□□ 0.13
BRCA1-228ENST00000618469 PLEKHM1Q9Y4G2 1056 aa15.84■□□□□ 0.13
BRCA1-228ENST00000618469 PCYT1BQ9Y5K3 369 aaPredicted RBP15.84■□□□□ 0.13
BRCA1-228ENST00000618469 ST14Q9Y5Y6 855 aa15.84■□□□□ 0.13
BRCA1-228ENST00000618469 NAV2Q8IVL1 2488 aa15.84■□□□□ 0.13
BRCA1-228ENST00000618469 TEX51A0A1B0GUA7 166 aa15.83■□□□□ 0.12
BRCA1-228ENST00000618469 C5orf60A6NFR6 353 aa15.83■□□□□ 0.12
BRCA1-228ENST00000618469 CASC3O15234 703 aaKnown RBP15.83■□□□□ 0.12
BRCA1-228ENST00000618469 BUD23O43709 281 aaKnown RBP15.83■□□□□ 0.12
BRCA1-228ENST00000618469 DNAJC6O75061 913 aa15.83■□□□□ 0.12
BRCA1-228ENST00000618469 USP12O75317 370 aa15.83■□□□□ 0.12
BRCA1-228ENST00000618469 SLC25A14O95258 325 aaPredicted RBP15.83■□□□□ 0.12
BRCA1-228ENST00000618469 RTP5Q14D33 572 aa15.83■□□□□ 0.12
BRCA1-228ENST00000618469 CERCAMQ5T4B2 595 aa15.83■□□□□ 0.12
BRCA1-228ENST00000618469 ZNF648Q5T619 568 aaPredicted RBP15.83■□□□□ 0.12
BRCA1-228ENST00000618469 CDCP2Q5VXM1 449 aa15.83■□□□□ 0.12
BRCA1-228ENST00000618469 PDPK2PQ6A1A2 396 aa15.83■□□□□ 0.12
BRCA1-228ENST00000618469 UBE2Q2Q8WVN8 375 aa15.83■□□□□ 0.12
BRCA1-228ENST00000618469 GLYATL1Q969I3 302 aa15.83■□□□□ 0.12
BRCA1-228ENST00000618469 LRRC45Q96CN5 670 aa15.83■□□□□ 0.12
BRCA1-228ENST00000618469 TBL1YQ9BQ87 522 aa15.83■□□□□ 0.12
BRCA1-228ENST00000618469 OR2AG1Q9H205 316 aa15.83■□□□□ 0.12
BRCA1-228ENST00000618469 SPATS2LQ9NUQ6 558 aaKnown RBP15.83■□□□□ 0.12
BRCA1-228ENST00000618469 ZNHIT2Q9UHR6 403 aa15.83■□□□□ 0.12
BRCA1-228ENST00000618469 RABGEF1Q9UJ41 708 aa15.83■□□□□ 0.12
BRCA1-228ENST00000618469 PKP3Q9Y446 797 aa15.83■□□□□ 0.12
BRCA1-228ENST00000618469 PCDHB1Q9Y5F3 818 aa15.83■□□□□ 0.12
BRCA1-228ENST00000618469 RP1P56715 2156 aa15.83■□□□□ 0.12
BRCA1-228ENST00000618469 ARHGEF17Q96PE2 2063 aaPredicted RBP15.82■□□□□ 0.12
BRCA1-228ENST00000618469 LIASO43766 372 aa15.82■□□□□ 0.12
BRCA1-228ENST00000618469 CSO75390 466 aaKnown RBP15.82■□□□□ 0.12
BRCA1-228ENST00000618469 MTX2O75431 263 aa15.82■□□□□ 0.12
BRCA1-228ENST00000618469 ACP5P13686 325 aa15.82■□□□□ 0.12
BRCA1-228ENST00000618469 ADRA1AP35348 466 aa15.82■□□□□ 0.12
BRCA1-228ENST00000618469 SPAM1P38567 509 aa15.82■□□□□ 0.12
BRCA1-228ENST00000618469 MAZP56270 477 aaKnown RBP15.82■□□□□ 0.12
BRCA1-228ENST00000618469 LRP8Q14114 963 aa15.82■□□□□ 0.12
BRCA1-228ENST00000618469 SPIDRQ14159 915 aa15.82■□□□□ 0.12
BRCA1-228ENST00000618469 SPARCL1Q14515 664 aa15.82■□□□□ 0.12
BRCA1-228ENST00000618469 HLTFQ14527 1009 aaKnown RBP eCLIP15.82■□□□□ 0.12
BRCA1-228ENST00000618469 P3H1Q32P28 736 aa15.82■□□□□ 0.12
BRCA1-228ENST00000618469 ARHGAP40Q5TG30 622 aa15.82■□□□□ 0.12
BRCA1-228ENST00000618469 CRTC3Q6UUV7 619 aa15.82■□□□□ 0.12
BRCA1-228ENST00000618469 FAM151BQ6UXP7 276 aa15.82■□□□□ 0.12
BRCA1-228ENST00000618469 CHST15Q7LFX5 561 aaPredicted RBP15.82■□□□□ 0.12
BRCA1-228ENST00000618469 TAB3Q8N5C8 712 aaPredicted RBP15.82■□□□□ 0.12
BRCA1-228ENST00000618469 OR6C4Q8NGE1 309 aa15.82■□□□□ 0.12
BRCA1-228ENST00000618469 SNIP1Q8TAD8 396 aaKnown RBP15.82■□□□□ 0.12
BRCA1-228ENST00000618469 C1orf54Q8WWF1 131 aa15.82■□□□□ 0.12
BRCA1-228ENST00000618469 NRSN2Q9GZP1 204 aa15.82■□□□□ 0.12
BRCA1-228ENST00000618469 IL17CQ9P0M4 197 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 217.4 ms