RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 SPDYE2Q495Y8 402 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 NT5DC4Q86YG4 428 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 OR2T12Q8NG77 320 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 OR5B17Q8NGF7 314 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 ZNF431Q8TF32 576 aaPredicted RBP13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 CENPIQ92674 756 aaPredicted RBP13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 SLC2A11Q9BYW1 496 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 CASS4Q9NQ75 786 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 MAGEL2Q9UJ55 1249 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 SAMHD1Q9Y3Z3 626 aaKnown RBP13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 SPEF2Q9C093 1822 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 SPDYE2BA6NHP3 402 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 SPDYE6P0CI01 402 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 MTPNP58546 118 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 RAB10P61026 200 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 WSCD2Q2TBF2 565 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 BCL7AQ4VC05 210 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 ALFQ53S48 1182 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 SMIM5Q71RC9 77 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 KRT74Q7RTS7 529 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 PROSER1Q86XN7 944 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 SIMC1Q8NDZ2 872 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 MRPL45Q9BRJ2 306 aaKnown RBP13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 FAM49AQ9H0Q0 323 aaPredicted RBP13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 CRISPLD1Q9H336 500 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 NRBP2Q9NSY0 501 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 EIF3KQ9UBQ5 218 aaKnown RBP13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 PFDN2Q9UHV9 154 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 PCDHGB6Q9Y5F9 930 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 CHD4Q14839 1912 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 TCP10L2B9ZVM9 353 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 AP2A2O94973 939 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 SLURP2P0DP57 97 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 ARNTP27540 789 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 GALEQ14376 348 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 GOLGA7BQ2TAP0 167 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 ZACNQ401N2 412 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 INO80DQ53TQ3 878 aaPredicted RBP13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 CAND1Q86VP6 1230 aaKnown RBP13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 PTCD2Q8WV60 388 aaKnown RBP13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 MRPL57Q9BQC6 102 aaKnown RBP13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 NECTIN3Q9NQS3 549 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 BTG4Q9NY30 223 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 FAM8A1Q9UBU6 413 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 MRPL42Q9Y6G3 142 aaKnown RBP13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 MT-ND2P03891 347 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 SLC26A2P50443 739 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 ATP6V0D1P61421 351 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 GTF2BQ00403 316 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 PTPN11Q06124 597 aaPredicted RBP13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 C1DQ13901 141 aaKnown RBP13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 RFTN1Q14699 578 aaPredicted RBP13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 OR10Q1Q8NGQ4 319 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 DDX1Q92499 740 aaKnown RBP13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 LRRC58Q96CX6 371 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 PABPC5Q96DU9 382 aaKnown RBP13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 CGRRF1Q99675 332 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 FANCFQ9NPI8 374 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 RNF112Q9ULX5 631 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 EDARQ9UNE0 448 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 RNF6Q9Y252 685 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 EIF3LQ9Y262 564 aaKnown RBP13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 MAGED1Q9Y5V3 778 aaPredicted RBP13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 AFDNP55196 1824 aaKnown RBP13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 TCAF2A6NFQ2 919 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 NUMBP49757 651 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 DSTNP60981 165 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 LRRC74AQ0VAA2 488 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 FSCN1Q16658 493 aaKnown RBP13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 SH3PXD2AQ5TCZ1 1133 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 MAVSQ7Z434 540 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 PTGR2Q8N8N7 351 aaPredicted RBP13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 SPPL2AQ8TCT8 520 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 MZB1Q8WU39 189 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 WDR18Q9BV38 432 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 REEP1Q9H902 201 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 HCN4Q9Y3Q4 1203 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 CCDC88AQ3V6T2 1871 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 CYP3A7-CYP3A51PA0A087WV96 503 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 FCER2P06734 321 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 CYP3A7P24462 503 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 OXTRP30559 389 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 TALDO1P37837 337 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 GJA9P57773 515 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 CTBSQ01459 385 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 NCF4Q15080 339 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 KIF18BQ86Y91 864 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 MAP4K3Q8IVH8 894 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 ST8SIA2Q92186 375 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 C1QTNF1Q9BXJ1 281 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 NKIRAS2Q9NYR9 191 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 TJP2Q9UDY2 1190 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 STAP1Q9ULZ2 295 aa13.47□□□□□ -0.25
PPP4R3B-205ENST00000616288 SMIM30A4D0T7 59 aa13.46□□□□□ -0.25
PPP4R3B-205ENST00000616288 RFC2P35250 354 aa13.46□□□□□ -0.25
PPP4R3B-205ENST00000616288 CD47Q08722 323 aa13.46□□□□□ -0.25
PPP4R3B-205ENST00000616288 ELP6Q0PNE2 266 aa13.46□□□□□ -0.25
PPP4R3B-205ENST00000616288 SMARCB1Q12824 385 aa13.46□□□□□ -0.25
PPP4R3B-205ENST00000616288 SLC10A2Q12908 348 aaPredicted RBP13.46□□□□□ -0.25
PPP4R3B-205ENST00000616288 CLCA4Q14CN2 919 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms