RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 NDFIP2Q9NV92 336 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 GJD2Q9UKL4 321 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 FXYD1O00168 92 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 AZIN1O14977 448 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 TBC1D4O60343 1298 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 TMCC2O75069 709 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 ARSFP54793 590 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 ATP6V0D1P61421 351 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 RBBP7Q16576 425 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 WDR45BQ5MNZ6 344 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 USP43Q70EL4 1123 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 THAP5Q7Z6K1 395 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 ZDHHC13Q8IUH4 622 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 SUN5Q8TC36 379 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 FRS2Q8WU20 508 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 TOP1MTQ969P6 601 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 RHNO1Q9BSD3 238 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 C17orf80Q9BSJ5 609 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 ALOXE3Q9BYJ1 711 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 RGS18Q9NS28 235 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 PGAP2Q9UHJ9 254 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 AQP12BA6NM10 295 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 FAM47E-STBD1D6RA91 191 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 PFDN6O15212 129 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 CDK14O94921 469 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 FADS2O95864 444 aaKnown RBP13.09□□□□□ -0.31
MSH6-214ENST00000616033 CAPNS1P04632 268 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 PAMP19021 973 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 PIK3CGP48736 1102 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 CREB5Q02930 508 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 SMU1Q2TAY7 513 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 WSCD1Q658N2 575 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 KCTD11Q693B1 232 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 CCDC103Q8IW40 242 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 AQP12AQ8IXF9 295 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 CLYBLQ8N0X4 340 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 ZNF555Q8NEP9 628 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 BLOC1S5Q8TDH9 187 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 SLC22A17Q8WUG5 538 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 PTERQ96BW5 349 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 ABCG8Q9H221 673 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 ELP3Q9H9T3 547 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 NT5MQ9NPB1 228 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 TRPV5Q9NQA5 729 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 RNF181Q9P0P0 153 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 VWA7Q9Y334 891 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 MSI1O43347 362 aaKnown RBP13.09□□□□□ -0.31
MSH6-214ENST00000616033 HBP1O60381 514 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 TSPAN1O60635 241 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 KATNA1O75449 491 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 SEC24AO95486 1093 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 GTF2E2P29084 291 aaKnown RBP13.09□□□□□ -0.31
MSH6-214ENST00000616033 SELPLGQ14242 412 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 PAFAH1B3Q15102 231 aaKnown RBP13.09□□□□□ -0.31
MSH6-214ENST00000616033 ARL13BQ3SXY8 428 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 UNC50Q53HI1 259 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 TJAP1Q5JTD0 557 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 DCAF15Q66K64 600 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 TMEM207Q6UWW9 146 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 ZDHHC17Q8IUH5 632 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 FNDC5Q8NAU1 212 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 B3GALNT2Q8NCR0 500 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 CALML6Q8TD86 181 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 FEM1CQ96JP0 617 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 SH3GL1Q99961 368 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 RASSF1Q9NS23 344 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 MARCH4Q9P2E8 410 aaPredicted RBP13.09□□□□□ -0.31
MSH6-214ENST00000616033 PDE10AQ9Y233 779 aa13.09□□□□□ -0.31
MSH6-214ENST00000616033 QSER1Q2KHR3 1735 aa13.08□□□□□ -0.32
MSH6-214ENST00000616033 GOLGA4Q13439 2230 aaKnown RBP13.08□□□□□ -0.32
MSH6-214ENST00000616033 SOBPA7XYQ1 873 aa13.08□□□□□ -0.32
MSH6-214ENST00000616033 ALDH2P05091 517 aa13.08□□□□□ -0.32
MSH6-214ENST00000616033 IDO1P14902 403 aa13.08□□□□□ -0.32
MSH6-214ENST00000616033 LBPP18428 481 aa13.08□□□□□ -0.32
MSH6-214ENST00000616033 CHRNB3Q05901 458 aa13.08□□□□□ -0.32
MSH6-214ENST00000616033 XAF1Q6GPH4 301 aa13.08□□□□□ -0.32
MSH6-214ENST00000616033 ZNF419Q96HQ0 510 aaPredicted RBP13.08□□□□□ -0.32
MSH6-214ENST00000616033 ZNF347Q96SE7 839 aa13.08□□□□□ -0.32
MSH6-214ENST00000616033 UHRF1Q96T88 793 aaPredicted RBP13.08□□□□□ -0.32
MSH6-214ENST00000616033 HOPXQ9BPY8 73 aaPredicted RBP13.08□□□□□ -0.32
MSH6-214ENST00000616033 C11orf84Q9BUA3 381 aaPredicted RBP13.08□□□□□ -0.32
MSH6-214ENST00000616033 ATP13A3Q9H7F0 1226 aa13.08□□□□□ -0.32
MSH6-214ENST00000616033 AMBNQ9NP70 447 aa13.08□□□□□ -0.32
MSH6-214ENST00000616033 POLG2Q9UHN1 485 aa13.08□□□□□ -0.32
MSH6-214ENST00000616033 TTC3P53804 2025 aa13.08□□□□□ -0.32
MSH6-214ENST00000616033 MYO1GB0I1T2 1018 aa13.08□□□□□ -0.32
MSH6-214ENST00000616033 MEN1O00255 615 aa13.08□□□□□ -0.32
MSH6-214ENST00000616033 ABCB7O75027 752 aa13.08□□□□□ -0.32
MSH6-214ENST00000616033 TOMM70O94826 608 aa13.08□□□□□ -0.32
MSH6-214ENST00000616033 C1RP00736 705 aa13.08□□□□□ -0.32
MSH6-214ENST00000616033 CST1P01037 141 aa13.08□□□□□ -0.32
MSH6-214ENST00000616033 RBP1P09455 135 aa13.08□□□□□ -0.32
MSH6-214ENST00000616033 CYP2C8P10632 490 aa13.08□□□□□ -0.32
MSH6-214ENST00000616033 HADHAP40939 763 aa13.08□□□□□ -0.32
MSH6-214ENST00000616033 TRPC1P48995 793 aa13.08□□□□□ -0.32
MSH6-214ENST00000616033 ACADVLP49748 655 aa13.08□□□□□ -0.32
MSH6-214ENST00000616033 GALNT2Q10471 571 aa13.08□□□□□ -0.32
MSH6-214ENST00000616033 GTF2H3Q13889 308 aa13.08□□□□□ -0.32
MSH6-214ENST00000616033 SYT16Q17RD7 645 aa13.08□□□□□ -0.32
MSH6-214ENST00000616033 SGO1Q5FBB7 561 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms