RNA–Protein interactions for RNA: ENST00000614565.4

CDH4-203, Transcript of cadherin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH4, Length 6,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-203ENST00000614565 MPP5Q8N3R9 675 aa12.49□□□□□ -0.41
CDH4-203ENST00000614565 ARHGAP28Q9P2N2 729 aa12.49□□□□□ -0.41
CDH4-203ENST00000614565 MAFBQ9Y5Q3 323 aaPredicted RBP12.49□□□□□ -0.41
CDH4-203ENST00000614565 CCDC154A6NI56 674 aa12.49□□□□□ -0.41
CDH4-203ENST00000614565 PPP1R11O60927 126 aaPredicted RBP12.49□□□□□ -0.41
CDH4-203ENST00000614565 ZNF217O75362 1048 aa12.49□□□□□ -0.41
CDH4-203ENST00000614565 SLC29A2Q14542 456 aa12.49□□□□□ -0.41
CDH4-203ENST00000614565 C1orf94Q6P1W5 598 aa12.49□□□□□ -0.41
CDH4-203ENST00000614565 ZNF571Q7Z3V5 609 aaPredicted RBP12.49□□□□□ -0.41
CDH4-203ENST00000614565 SNAP91O60641 907 aa12.49□□□□□ -0.41
CDH4-203ENST00000614565 REM1O75628 298 aa12.49□□□□□ -0.41
CDH4-203ENST00000614565 AGKQ53H12 422 aa12.49□□□□□ -0.41
CDH4-203ENST00000614565 SPANXN3Q5MJ09 141 aa12.49□□□□□ -0.41
CDH4-203ENST00000614565 EID3Q8N140 333 aa12.49□□□□□ -0.41
CDH4-203ENST00000614565 GHDCQ8N2G8 530 aa12.49□□□□□ -0.41
CDH4-203ENST00000614565 ANKLE1Q8NAG6 615 aa12.49□□□□□ -0.41
CDH4-203ENST00000614565 HAS1Q92839 578 aa12.49□□□□□ -0.41
CDH4-203ENST00000614565 TP53INP1Q96A56 240 aa12.49□□□□□ -0.41
CDH4-203ENST00000614565 ARRDC3Q96B67 414 aa12.49□□□□□ -0.41
CDH4-203ENST00000614565 ARHGEF3Q9NR81 526 aa12.49□□□□□ -0.41
CDH4-203ENST00000614565 TBC1D23Q9NUY8 699 aa12.49□□□□□ -0.41
CDH4-203ENST00000614565 LAMA4Q16363 1823 aa12.49□□□□□ -0.41
CDH4-203ENST00000614565 CAPN14A8MX76 684 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 PGAM1P18669 254 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 CPN2P22792 545 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 COPAP53621 1224 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 DEFA1P59665 94 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 DEFA3P59666 94 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 RBBP4Q09028 425 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 CYLC2Q14093 348 aaPredicted RBP12.48□□□□□ -0.41
CDH4-203ENST00000614565 SLC36A4Q6YBV0 504 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 BNC2Q6ZN30 1099 aaPredicted RBP12.48□□□□□ -0.41
CDH4-203ENST00000614565 GMFBP60983 142 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 KLHL12Q53G59 568 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 LRRC6Q86X45 466 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 MICU2Q8IYU8 434 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 SLC43A3Q8NBI5 491 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 CLHC1Q8NHS4 586 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 ADAMTS15Q8TE58 950 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 TNFRSF25Q93038 417 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 SEPHS2Q99611 448 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 KCTD14Q9BQ13 255 aaPredicted RBP12.48□□□□□ -0.41
CDH4-203ENST00000614565 GRIP2Q9C0E4 1043 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 BCAS3Q9H6U6 928 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 CCDC177Q9NQR7 707 aaPredicted RBP12.48□□□□□ -0.41
CDH4-203ENST00000614565 CIB4A0PJX0 185 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 SMNDC1O75940 238 aaKnown RBP eCLIP12.48□□□□□ -0.41
CDH4-203ENST00000614565 RARAP10276 462 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 PBX2P40425 430 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 SIM1P81133 766 aaPredicted RBP12.48□□□□□ -0.41
CDH4-203ENST00000614565 CSTF3Q12996 717 aaKnown RBP12.48□□□□□ -0.41
CDH4-203ENST00000614565 NR0B2Q15466 257 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 TMEM119Q4V9L6 283 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 WDR36Q8NI36 951 aaKnown RBP12.48□□□□□ -0.41
CDH4-203ENST00000614565 RB1P06400 928 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 ARSAP15289 507 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 HOXB8P17481 243 aaPredicted RBP12.48□□□□□ -0.41
CDH4-203ENST00000614565 PSMA4P25789 261 aaKnown RBP12.48□□□□□ -0.41
CDH4-203ENST00000614565 EXOC3L2Q2M3D2 409 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 DGKKQ5KSL6 1271 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 C3orf20Q8ND61 904 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 DNAJC9Q8WXX5 260 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 TRNT1Q96Q11 434 aaKnown RBP12.48□□□□□ -0.41
CDH4-203ENST00000614565 ADAMTS3O15072 1205 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 WNT3AP56704 352 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 PCID2Q5JVF3 399 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 VANGL1Q8TAA9 524 aaPredicted RBP12.48□□□□□ -0.41
CDH4-203ENST00000614565 MDM1Q8TC05 714 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 ZDHHC12Q96GR4 267 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.48□□□□□ -0.41
CDH4-203ENST00000614565 IRF2BPLQ9H1B7 796 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 KCNMB3Q9NPA1 279 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 C19orf25Q9UFG5 118 aaPredicted RBP12.48□□□□□ -0.41
CDH4-203ENST00000614565 PCDHA3Q9Y5H8 950 aa12.48□□□□□ -0.41
CDH4-203ENST00000614565 A0A1B0GW55 424 aa12.47□□□□□ -0.41
CDH4-203ENST00000614565 PRR5-ARHGAP8B1AHC4 643 aa12.47□□□□□ -0.41
CDH4-203ENST00000614565 DUX4L2P0CJ85 424 aa12.47□□□□□ -0.41
CDH4-203ENST00000614565 DUX4L3P0CJ86 424 aa12.47□□□□□ -0.41
CDH4-203ENST00000614565 DUX4L4P0CJ87 422 aa12.47□□□□□ -0.41
CDH4-203ENST00000614565 DUX4L5P0CJ88 424 aa12.47□□□□□ -0.41
CDH4-203ENST00000614565 DUX4L6P0CJ89 424 aa12.47□□□□□ -0.41
CDH4-203ENST00000614565 DUX4L7P0CJ90 424 aa12.47□□□□□ -0.41
CDH4-203ENST00000614565 DRD4P21917 467 aa12.47□□□□□ -0.41
CDH4-203ENST00000614565 TARSP26639 723 aaKnown RBP12.47□□□□□ -0.41
CDH4-203ENST00000614565 TRIM61Q5EBN2 209 aa12.47□□□□□ -0.41
CDH4-203ENST00000614565 TTC33Q6PID6 262 aaPredicted RBP12.47□□□□□ -0.41
CDH4-203ENST00000614565 ZNF461Q8TAF7 563 aa12.47□□□□□ -0.41
CDH4-203ENST00000614565 MMABQ96EY8 250 aaPredicted RBP12.47□□□□□ -0.41
CDH4-203ENST00000614565 NCKIPSDQ9NZQ3 722 aa12.47□□□□□ -0.41
CDH4-203ENST00000614565 DUX4Q9UBX2 424 aa12.47□□□□□ -0.41
CDH4-203ENST00000614565 TTLL8A6PVC2 850 aa12.47□□□□□ -0.41
CDH4-203ENST00000614565 RNF225M0QZC1 329 aaPredicted RBP12.47□□□□□ -0.41
CDH4-203ENST00000614565 TRAFD1O14545 582 aaPredicted RBP12.47□□□□□ -0.41
CDH4-203ENST00000614565 TP73O15350 636 aa12.47□□□□□ -0.41
CDH4-203ENST00000614565 INSIG1O15503 277 aa12.47□□□□□ -0.41
CDH4-203ENST00000614565 ALPPP05187 535 aa12.47□□□□□ -0.41
CDH4-203ENST00000614565 ZSCAN5DPP0CG00 497 aa12.47□□□□□ -0.41
CDH4-203ENST00000614565 CEBPBP17676 345 aa12.47□□□□□ -0.41
CDH4-203ENST00000614565 RAB28P51157 221 aa12.47□□□□□ -0.41
CDH4-203ENST00000614565 GTF2BQ00403 316 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms