RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 CORO1BQ9BR76 489 aa17.32■□□□□ 0.36
HMGXB3-206ENST00000613459 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.32■□□□□ 0.36
HMGXB3-206ENST00000613459 MSRAQ9UJ68 235 aa17.32■□□□□ 0.36
HMGXB3-206ENST00000613459 MAN2B2Q9Y2E5 1009 aa17.32■□□□□ 0.36
HMGXB3-206ENST00000613459 RIC1Q4ADV7 1423 aa17.32■□□□□ 0.36
HMGXB3-206ENST00000613459 A0A0X1KG70 313 aa17.32■□□□□ 0.36
HMGXB3-206ENST00000613459 THRBP10828 461 aa17.32■□□□□ 0.36
HMGXB3-206ENST00000613459 CYP4B1P13584 511 aa17.32■□□□□ 0.36
HMGXB3-206ENST00000613459 SPAM1P38567 509 aa17.32■□□□□ 0.36
HMGXB3-206ENST00000613459 HADHBP55084 474 aaKnown RBP17.32■□□□□ 0.36
HMGXB3-206ENST00000613459 TMEM44Q2T9K0 475 aa17.32■□□□□ 0.36
HMGXB3-206ENST00000613459 ATP13A5Q4VNC0 1218 aa17.32■□□□□ 0.36
HMGXB3-206ENST00000613459 PLET1Q6UQ28 207 aa17.32■□□□□ 0.36
HMGXB3-206ENST00000613459 CHCHD6Q9BRQ6 235 aa17.32■□□□□ 0.36
HMGXB3-206ENST00000613459 UNC93B1Q9H1C4 597 aa17.32■□□□□ 0.36
HMGXB3-206ENST00000613459 GMIPQ9P107 970 aa17.32■□□□□ 0.36
HMGXB3-206ENST00000613459 A8MUI8 341 aa17.32■□□□□ 0.36
HMGXB3-206ENST00000613459 DNM1LO00429 736 aa17.32■□□□□ 0.36
HMGXB3-206ENST00000613459 BCKDKO14874 412 aa17.32■□□□□ 0.36
HMGXB3-206ENST00000613459 C9P02748 559 aa17.32■□□□□ 0.36
HMGXB3-206ENST00000613459 CTSKP43235 329 aa17.32■□□□□ 0.36
HMGXB3-206ENST00000613459 PTPN5P54829 565 aa17.32■□□□□ 0.36
HMGXB3-206ENST00000613459 PGBD2Q6P3X8 592 aa17.32■□□□□ 0.36
HMGXB3-206ENST00000613459 ZFPM1Q8IX07 1006 aa17.32■□□□□ 0.36
HMGXB3-206ENST00000613459 AGO3Q9H9G7 860 aaKnown RBP17.32■□□□□ 0.36
HMGXB3-206ENST00000613459 PHPT1Q9NRX4 125 aaPredicted RBP17.32■□□□□ 0.36
HMGXB3-206ENST00000613459 MAT2BQ9NZL9 334 aa17.32■□□□□ 0.36
HMGXB3-206ENST00000613459 ZNF490Q9ULM2 529 aaPredicted RBP17.32■□□□□ 0.36
HMGXB3-206ENST00000613459 MST1RQ04912 1400 aa17.32■□□□□ 0.36
HMGXB3-206ENST00000613459 ERAL1O75616 437 aaKnown RBP17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 KRT33AO76009 404 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 IGFBP5P24593 272 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 IL18Q14116 193 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 LARS2Q15031 903 aaKnown RBP17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 KCNA10Q16322 511 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 RUNDC3AQ59EK9 446 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 LCN1P1Q5VSP4 162 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 MON1BQ7L1V2 547 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 CYP4X1Q8N118 509 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 MECRQ9BV79 373 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 TMEM27Q9HBJ8 222 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 MIOSQ9NXC5 875 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 EGFL7Q9UHF1 273 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 ELOVL7A1L3X0 281 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 UROSP10746 265 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 SSR2P43308 183 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 AP3S2P59780 193 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 SULT1C3Q6IMI6 304 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 DRICH1Q6PGQ1 229 aaPredicted RBP17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 SLC30A8Q8IWU4 369 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 OR10H5Q8NGA6 315 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 MRPL45Q9BRJ2 306 aaKnown RBP17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 GLIS2Q9BZE0 524 aaPredicted RBP17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 SMPD3Q9NY59 655 aaPredicted RBP17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 GNEQ9Y223 722 aaKnown RBP17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 PPLO60437 1756 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 ZNF879B4DU55 563 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 NPHS1O60500 1241 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 PRPS2P11908 318 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 ADAMTS15Q8TE58 950 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 AARSD1Q9BTE6 412 aaKnown RBP17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 NPEPPSL1A6NEC2 478 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 CLDN9O95484 217 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 CALCAP01258 141 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 AKR1D1P51857 326 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 NDUFA9Q16795 377 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 PTPN20Q4JDL3 420 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 TATDN1Q6P1N9 297 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 FAM151BQ6UXP7 276 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 GK5Q6ZS86 529 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 GPR142Q7Z601 462 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 SLC34A3Q8N130 599 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 PPP1R14BQ96C90 147 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 GSDMCQ9BYG8 508 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 PCDHB9Q9Y5E1 797 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 ADAMDEC1O15204 470 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 ZNF12P17014 697 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 SP100P23497 879 aaPredicted RBP17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 MBTD1Q05BQ5 628 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 ABHD15Q6UXT9 468 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 JOSD2Q8TAC2 188 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 CIDEBQ9UHD4 219 aa17.31■□□□□ 0.36
HMGXB3-206ENST00000613459 FADS2P1A8MWK0 482 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 PSIP1O75475 530 aaKnown RBP17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 CAPN15O75808 1086 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 IL1BP01584 269 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 ITGB5P18084 799 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 LCP2Q13094 533 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 TOMM20Q15388 145 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 ZNF697Q5TEC3 545 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 RTL4Q6ZR62 310 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 TWIST2Q8WVJ9 160 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 ZNF354BQ96LW1 612 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 TTPALQ9BTX7 342 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 SDCBP2Q9H190 292 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 SP140LQ9H930 580 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 REXO2Q9Y3B8 237 aaKnown RBP17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 FAM25EA8MYX2 175 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 AGPSO00116 658 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 STK16O75716 305 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms