RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 ARL14Q8N4G2 192 aa12.21□□□□□ -0.45
CBWD3-208ENST00000612050 Q8N9G6 341 aaPredicted RBP12.21□□□□□ -0.45
CBWD3-208ENST00000612050 CCL4L1Q8NHW4 92 aa12.21□□□□□ -0.45
CBWD3-208ENST00000612050 CCDC110Q8TBZ0 833 aa12.21□□□□□ -0.45
CBWD3-208ENST00000612050 OXNAD1Q96HP4 312 aaPredicted RBP12.21□□□□□ -0.45
CBWD3-208ENST00000612050 VPS35Q96QK1 796 aa12.21□□□□□ -0.45
CBWD3-208ENST00000612050 DPYSL5Q9BPU6 564 aa12.21□□□□□ -0.45
CBWD3-208ENST00000612050 FAM118BQ9BPY3 351 aa12.21□□□□□ -0.45
CBWD3-208ENST00000612050 TBL1YQ9BQ87 522 aa12.21□□□□□ -0.45
CBWD3-208ENST00000612050 HERPUD2Q9BSE4 406 aa12.21□□□□□ -0.45
CBWD3-208ENST00000612050 OSGEPL1Q9H4B0 414 aa12.21□□□□□ -0.45
CBWD3-208ENST00000612050 POLR1BQ9H9Y6 1135 aa12.21□□□□□ -0.45
CBWD3-208ENST00000612050 GRPEL1Q9HAV7 217 aa12.21□□□□□ -0.45
CBWD3-208ENST00000612050 THSD1Q9NS62 852 aa12.21□□□□□ -0.45
CBWD3-208ENST00000612050 ZNF148Q9UQR1 794 aa12.21□□□□□ -0.45
CBWD3-208ENST00000612050 CCDC187A0A096LP49 1063 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 SRRM3A6NNA2 597 aaPredicted RBP12.2□□□□□ -0.46
CBWD3-208ENST00000612050 NUAK1O60285 661 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 NOBOXO60393 691 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 CDK14O94921 469 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 ECEL1O95672 775 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 RALBP11234 206 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 ACP5P13686 325 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 ALDH4A1P30038 563 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 AKT1P31749 480 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 CHRNA4P43681 627 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 INHBCP55103 352 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 CCL7P80098 99 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 TAF1AQ15573 450 aaPredicted RBP12.2□□□□□ -0.46
CBWD3-208ENST00000612050 C3orf38Q5JPI3 329 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 FOXR1Q6PIV2 292 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 LINC00523Q86TU6 105 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 SLC9B2Q86UD5 537 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 PIM3Q86V86 326 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 TRIM48Q8IWZ4 208 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 CCDC89Q8N998 374 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 FAM71DQ8N9W8 422 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 WDR36Q8NI36 951 aaKnown RBP12.2□□□□□ -0.46
CBWD3-208ENST00000612050 DTX3LQ8TDB6 740 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 TMEM159Q96B96 161 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 CCDC97Q96F63 343 aaPredicted RBP12.2□□□□□ -0.46
CBWD3-208ENST00000612050 ZNF578Q96N58 590 aaPredicted RBP12.2□□□□□ -0.46
CBWD3-208ENST00000612050 DCBLD2Q96PD2 775 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 SLC38A3Q99624 504 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.2□□□□□ -0.46
CBWD3-208ENST00000612050 OR2AG1Q9H205 316 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 C10orf88Q9H8K7 445 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 LRRC40Q9H9A6 602 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 EPB41L5Q9HCM4 733 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 SPATS2LQ9NUQ6 558 aaKnown RBP12.2□□□□□ -0.46
CBWD3-208ENST00000612050 SPO11Q9Y5K1 396 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 RNF215Q9Y6U7 377 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 D6RAR5 112 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 BRINP1O60477 761 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 SNX2O60749 519 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 KCNJ13O60928 360 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 DNAJC6O75061 913 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 CPNE6O95741 557 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 AGTP01019 485 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 JMJD7P0C870 316 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 HALP42357 657 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 MLLT3P42568 568 aaPredicted RBP12.2□□□□□ -0.46
CBWD3-208ENST00000612050 LSSP48449 732 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 KLF1Q13351 362 aaPredicted RBP12.2□□□□□ -0.46
CBWD3-208ENST00000612050 LAMB3Q13751 1172 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 MEI1Q5TIA1 1274 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 KCTD16Q68DU8 428 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 FAM151BQ6UXP7 276 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 SPRED1Q7Z699 444 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 TRAPPC5Q8IUR0 188 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 OR10G6Q8NH81 332 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 FGF11Q92914 225 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 WDR24Q96S15 920 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 TMEM121Q9BTD3 319 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 HOMER3Q9NSC5 361 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 KCNK4Q9NYG8 393 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 IL17CQ9P0M4 197 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 ATXN10Q9UBB4 475 aa12.2□□□□□ -0.46
CBWD3-208ENST00000612050 ZFC3H1O60293 1989 aaKnown RBP12.19□□□□□ -0.46
CBWD3-208ENST00000612050 ACACBO00763 2458 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 KIR2DS5A0A0G2JLQ3 304 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 A0A0G2JNG1 304 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 KLHL33A6NCF5 533 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 ERI2A8K979 691 aaKnown RBP12.19□□□□□ -0.46
CBWD3-208ENST00000612050 PDZK1P1A8MUH7 402 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 CFAP99D6REC4 459 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 KIR2DS3K7RE56 304 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 NTN3O00634 580 aaPredicted RBP12.19□□□□□ -0.46
CBWD3-208ENST00000612050 AURKAO14965 403 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 ZSCAN12O43309 604 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 IFNB1P01574 187 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 MPOP05164 745 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 ZNF8P17098 575 aaPredicted RBP12.19□□□□□ -0.46
CBWD3-208ENST00000612050 MSH3P20585 1137 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 FDFT1P37268 417 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 MAZP56270 477 aaKnown RBP12.19□□□□□ -0.46
CBWD3-208ENST00000612050 PCBP4P57723 403 aaKnown RBP12.19□□□□□ -0.46
CBWD3-208ENST00000612050 ERVPABLB-1P60509 514 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 GPLD1P80108 840 aa12.19□□□□□ -0.46
CBWD3-208ENST00000612050 HHEXQ03014 270 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms