RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 LYSMD3Q7Z3D4 306 aa13.21□□□□□ -0.29
HMGB1P24-201ENST00000611897 TIPARPQ7Z3E1 657 aaKnown RBP13.21□□□□□ -0.29
HMGB1P24-201ENST00000611897 NIPA2Q8N8Q9 360 aa13.21□□□□□ -0.29
HMGB1P24-201ENST00000611897 CCHCR1Q8TD31 782 aa13.21□□□□□ -0.29
HMGB1P24-201ENST00000611897 MAML1Q92585 1016 aa13.21□□□□□ -0.29
HMGB1P24-201ENST00000611897 SH3KBP1Q96B97 665 aa13.21□□□□□ -0.29
HMGB1P24-201ENST00000611897 ELMO2Q96JJ3 720 aa13.21□□□□□ -0.29
HMGB1P24-201ENST00000611897 HERPUD2Q9BSE4 406 aa13.21□□□□□ -0.29
HMGB1P24-201ENST00000611897 SPATA16Q9BXB7 569 aa13.21□□□□□ -0.29
HMGB1P24-201ENST00000611897 CEP41Q9BYV8 373 aa13.21□□□□□ -0.29
HMGB1P24-201ENST00000611897 OR2AG1Q9H205 316 aa13.21□□□□□ -0.29
HMGB1P24-201ENST00000611897 FAM83DQ9H4H8 585 aa13.21□□□□□ -0.29
HMGB1P24-201ENST00000611897 SARS2Q9NP81 518 aaKnown RBP13.21□□□□□ -0.29
HMGB1P24-201ENST00000611897 PRDM8Q9NQV8 689 aa13.21□□□□□ -0.29
HMGB1P24-201ENST00000611897 KLC4Q9NSK0 619 aa13.21□□□□□ -0.29
HMGB1P24-201ENST00000611897 TMEM63CQ9P1W3 806 aa13.21□□□□□ -0.29
HMGB1P24-201ENST00000611897 RCOR3Q9P2K3 495 aaPredicted RBP13.21□□□□□ -0.29
HMGB1P24-201ENST00000611897 CPNE7Q9UBL6 633 aa13.21□□□□□ -0.29
HMGB1P24-201ENST00000611897 RP1L1Q8IWN7 2480 aaPredicted RBP13.2□□□□□ -0.3
HMGB1P24-201ENST00000611897 A0A1B0GTH6 734 aa13.2□□□□□ -0.3
HMGB1P24-201ENST00000611897 PDZK1P1A8MUH7 402 aa13.2□□□□□ -0.3
HMGB1P24-201ENST00000611897 KCNK1O00180 336 aa13.2□□□□□ -0.3
HMGB1P24-201ENST00000611897 CAPN5O15484 640 aaPredicted RBP13.2□□□□□ -0.3
HMGB1P24-201ENST00000611897 GRID2O43424 1007 aa13.2□□□□□ -0.3
HMGB1P24-201ENST00000611897 RASSF9O75901 435 aa13.2□□□□□ -0.3
HMGB1P24-201ENST00000611897 MTA2O94776 668 aa13.2□□□□□ -0.3
HMGB1P24-201ENST00000611897 PRLP01236 227 aa13.2□□□□□ -0.3
HMGB1P24-201ENST00000611897 TCN2P20062 427 aa13.2□□□□□ -0.3
HMGB1P24-201ENST00000611897 IL4RP24394 825 aa13.2□□□□□ -0.3
HMGB1P24-201ENST00000611897 MAP4P27816 1152 aaKnown RBP13.2□□□□□ -0.3
HMGB1P24-201ENST00000611897 PAFAH1B3Q15102 231 aaKnown RBP13.2□□□□□ -0.3
HMGB1P24-201ENST00000611897 QPCTQ16769 361 aa13.2□□□□□ -0.3
HMGB1P24-201ENST00000611897 ANKRD20A8PQ5CZ79 823 aa13.2□□□□□ -0.3
HMGB1P24-201ENST00000611897 HENMT1Q5T8I9 393 aaKnown RBP13.2□□□□□ -0.3
HMGB1P24-201ENST00000611897 IYDQ6PHW0 289 aa13.2□□□□□ -0.3
HMGB1P24-201ENST00000611897 WDR74Q6RFH5 385 aaPredicted RBP13.2□□□□□ -0.3
HMGB1P24-201ENST00000611897 ARHGAP22Q7Z5H3 698 aa13.2□□□□□ -0.3
HMGB1P24-201ENST00000611897 LRRC49Q8IUZ0 686 aa13.2□□□□□ -0.3
HMGB1P24-201ENST00000611897 ARRDC2Q8TBH0 407 aa13.2□□□□□ -0.3
HMGB1P24-201ENST00000611897 ZNF830Q96NB3 372 aaPredicted RBP13.2□□□□□ -0.3
HMGB1P24-201ENST00000611897 TGM7Q96PF1 710 aa13.2□□□□□ -0.3
HMGB1P24-201ENST00000611897 WDR24Q96S15 920 aa13.2□□□□□ -0.3
HMGB1P24-201ENST00000611897 MLPHQ9BV36 600 aaPredicted RBP13.2□□□□□ -0.3
HMGB1P24-201ENST00000611897 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.2□□□□□ -0.3
HMGB1P24-201ENST00000611897 ULBP3Q9BZM4 244 aa13.2□□□□□ -0.3
HMGB1P24-201ENST00000611897 BRD8Q9H0E9 1235 aa13.2□□□□□ -0.3
HMGB1P24-201ENST00000611897 CTTNBP2NLQ9P2B4 639 aa13.2□□□□□ -0.3
HMGB1P24-201ENST00000611897 CNOT6Q9ULM6 557 aaKnown RBP13.2□□□□□ -0.3
HMGB1P24-201ENST00000611897 SHOC2Q9UQ13 582 aa13.2□□□□□ -0.3
HMGB1P24-201ENST00000611897 A0A087X0T9 212 aa13.19□□□□□ -0.3
HMGB1P24-201ENST00000611897 KIR2DS5A0A0G2JLQ3 304 aa13.19□□□□□ -0.3
HMGB1P24-201ENST00000611897 A0A0G2JNG1 304 aa13.19□□□□□ -0.3
HMGB1P24-201ENST00000611897 A6NCN8 305 aa13.19□□□□□ -0.3
HMGB1P24-201ENST00000611897 KIR2DS3K7RE56 304 aa13.19□□□□□ -0.3
HMGB1P24-201ENST00000611897 MTX2O75431 263 aa13.19□□□□□ -0.3
HMGB1P24-201ENST00000611897 VIPP01282 170 aa13.19□□□□□ -0.3
HMGB1P24-201ENST00000611897 JCHAINP01591 159 aa13.19□□□□□ -0.3
HMGB1P24-201ENST00000611897 FAM228BP0C875 321 aa13.19□□□□□ -0.3
HMGB1P24-201ENST00000611897 ZNF8P17098 575 aaPredicted RBP13.19□□□□□ -0.3
HMGB1P24-201ENST00000611897 AMD1P17707 334 aa13.19□□□□□ -0.3
HMGB1P24-201ENST00000611897 NR1D1P20393 614 aa13.19□□□□□ -0.3
HMGB1P24-201ENST00000611897 EPHA4P54764 986 aa13.19□□□□□ -0.3
HMGB1P24-201ENST00000611897 KIR2DS5Q14953 304 aa13.19□□□□□ -0.3
HMGB1P24-201ENST00000611897 PCSK7Q16549 785 aa13.19□□□□□ -0.3
HMGB1P24-201ENST00000611897 HGSNATQ68CP4 663 aa13.19□□□□□ -0.3
HMGB1P24-201ENST00000611897 ALG1LQ6GMV1 187 aa13.19□□□□□ -0.3
HMGB1P24-201ENST00000611897 PLXDC1Q8IUK5 500 aa13.19□□□□□ -0.3
HMGB1P24-201ENST00000611897 CCDC13Q8IYE1 715 aa13.19□□□□□ -0.3
HMGB1P24-201ENST00000611897 APOBEC4Q8WW27 367 aaKnown RBP13.19□□□□□ -0.3
HMGB1P24-201ENST00000611897 ZNF670Q9BS34 389 aa13.19□□□□□ -0.3
HMGB1P24-201ENST00000611897 ZPBPQ9BS86 351 aa13.19□□□□□ -0.3
HMGB1P24-201ENST00000611897 EFHD1Q9BUP0 239 aa13.19□□□□□ -0.3
HMGB1P24-201ENST00000611897 PDP2Q9P2J9 529 aa13.19□□□□□ -0.3
HMGB1P24-201ENST00000611897 ATXN10Q9UBB4 475 aa13.19□□□□□ -0.3
HMGB1P24-201ENST00000611897 TRIM10Q9UDY6 481 aa13.19□□□□□ -0.3
HMGB1P24-201ENST00000611897 LNPEPQ9UIQ6 1025 aa13.19□□□□□ -0.3
HMGB1P24-201ENST00000611897 TUBD1Q9UJT1 453 aa13.19□□□□□ -0.3
HMGB1P24-201ENST00000611897 RPS6KL1Q9Y6S9 549 aa13.19□□□□□ -0.3
HMGB1P24-201ENST00000611897 SPTAN1Q13813 2472 aaKnown RBP13.18□□□□□ -0.3
HMGB1P24-201ENST00000611897 KATNA1O75449 491 aa13.18□□□□□ -0.3
HMGB1P24-201ENST00000611897 SLC25A14O95258 325 aaPredicted RBP13.18□□□□□ -0.3
HMGB1P24-201ENST00000611897 SERPING1P05155 500 aa13.18□□□□□ -0.3
HMGB1P24-201ENST00000611897 CYP1A2P05177 515 aa13.18□□□□□ -0.3
HMGB1P24-201ENST00000611897 ZNF28P17035 718 aa13.18□□□□□ -0.3
HMGB1P24-201ENST00000611897 MX2P20592 715 aa13.18□□□□□ -0.3
HMGB1P24-201ENST00000611897 CES1P23141 567 aa13.18□□□□□ -0.3
HMGB1P24-201ENST00000611897 CCNCP24863 283 aa13.18□□□□□ -0.3
HMGB1P24-201ENST00000611897 DLSTP36957 453 aa13.18□□□□□ -0.3
HMGB1P24-201ENST00000611897 CASRP41180 1078 aa13.18□□□□□ -0.3
HMGB1P24-201ENST00000611897 STAT5AP42229 794 aa13.18□□□□□ -0.3
HMGB1P24-201ENST00000611897 TAS2R40P59535 323 aa13.18□□□□□ -0.3
HMGB1P24-201ENST00000611897 RPL26P61254 145 aaKnown RBP13.18□□□□□ -0.3
HMGB1P24-201ENST00000611897 SH3BP2P78314 561 aa13.18□□□□□ -0.3
HMGB1P24-201ENST00000611897 MC1RQ01726 317 aa13.18□□□□□ -0.3
HMGB1P24-201ENST00000611897 ABHD18Q0P651 414 aa13.18□□□□□ -0.3
HMGB1P24-201ENST00000611897 ZBTB17Q13105 803 aa13.18□□□□□ -0.3
HMGB1P24-201ENST00000611897 SEPT6Q14141 434 aa13.18□□□□□ -0.3
HMGB1P24-201ENST00000611897 LACTB2Q53H82 288 aaPredicted RBP13.18□□□□□ -0.3
HMGB1P24-201ENST00000611897 CAVIN1Q6NZI2 390 aaKnown RBP13.18□□□□□ -0.3
HMGB1P24-201ENST00000611897 ALKBH5Q6P6C2 394 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms