RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 C8orf59Q8N0T1 100 aaPredicted RBP8.63□□□□□ -1.03
LIG4-204ENST00000611712 SFRP1Q8N474 314 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 FOPNLQ96NB1 174 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 ZBED2Q9BTP6 218 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 DGCR6LQ9BY27 220 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 TMCO1Q9UM00 188 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 KIAA1217Q5T5P2 1943 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 ANKRD12Q6UB98 2062 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 PQBP1O60828 265 aaKnown RBP8.62□□□□□ -1.03
LIG4-204ENST00000611712 URODP06132 367 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 ALOX15P16050 662 aaPredicted RBP8.62□□□□□ -1.03
LIG4-204ENST00000611712 CES1P23141 567 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 IGFBP6P24592 240 aaPredicted RBP8.62□□□□□ -1.03
LIG4-204ENST00000611712 CDKN2DP55273 166 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 PIK3R6Q5UE93 754 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 TTC23Q5W5X9 447 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 KLHDC10Q6PID8 442 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 PLD3Q8IV08 490 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 ARHGAP12Q8IWW6 846 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 UMODL1-AS1Q8N2C9 162 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 ATG16L2Q8NAA4 619 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 ANKRD49Q8WVL7 239 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 TOP1MTQ969P6 601 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 AARSD1Q9BTE6 412 aaKnown RBP8.62□□□□□ -1.03
LIG4-204ENST00000611712 IPPKQ9H8X2 491 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 INTS10Q9NVR2 710 aaKnown RBP8.62□□□□□ -1.03
LIG4-204ENST00000611712 SMPD3Q9NY59 655 aaPredicted RBP8.62□□□□□ -1.03
LIG4-204ENST00000611712 GNPTGQ9UJJ9 305 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 ATAD5Q96QE3 1844 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 LRRC14BA6NHZ5 514 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 TTC36A6NLP5 189 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 AQP12BA6NM10 295 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 H3BSA7 217 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 SH3BGRLO75368 114 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 S1PR4O95977 384 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 CST1P01037 141 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 ITGB1P05556 798 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 ANXA5P08758 320 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 GABRB3P28472 473 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 SLC26A3P40879 764 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 RPS9P46781 194 aaKnown RBP8.62□□□□□ -1.03
LIG4-204ENST00000611712 HSPA7P48741 367 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 CDH4P55283 916 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 C1QTNF8P60827 252 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 IKBKEQ14164 716 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 CES4AQ5XG92 561 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 FUT10Q6P4F1 479 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 PROSER1Q86XN7 944 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 AQP12AQ8IXF9 295 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 MICU2Q8IYU8 434 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 OR2T12Q8NG77 320 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 CLHC1Q8NHS4 586 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 ZFAND2BQ8WV99 257 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 MS4A4AQ96JQ5 239 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 NSUN5Q96P11 429 aaKnown RBP8.62□□□□□ -1.03
LIG4-204ENST00000611712 CDK15Q96Q40 435 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 TMEM248Q9NWD8 314 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 MAGEL2Q9UJ55 1249 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 PTGDR2Q9Y5Y4 395 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 TCAF2A6NFQ2 919 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 UNCXA6NJT0 531 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 H3BNX3 289 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 ENPP3O14638 875 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 EI24O14681 340 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 KERAO60938 352 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 ZNF623O75123 536 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 EOMESO95936 686 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 IGSF6O95976 241 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 PABPC4LP0CB38 370 aaKnown RBP8.62□□□□□ -1.03
LIG4-204ENST00000611712 RPL17P18621 184 aaKnown RBP8.62□□□□□ -1.03
LIG4-204ENST00000611712 CLK1P49759 484 aaKnown RBP8.62□□□□□ -1.03
LIG4-204ENST00000611712 TTC23LQ6PF05 361 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 CLEC14AQ86T13 490 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 SERINC5Q86VE9 423 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 MARVELD2Q8N4S9 558 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 SHKBP1Q8TBC3 707 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 IGSF8Q969P0 613 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 C1orf74Q96LT6 269 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 PLAC1Q9HBJ0 212 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 GPBP1L1Q9HC44 474 aaPredicted RBP8.62□□□□□ -1.03
LIG4-204ENST00000611712 PLK2Q9NYY3 685 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 FLRT1Q9NZU1 646 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 OAZ3Q9UMX2 235 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 SQORQ9Y6N5 450 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 CDK14O94921 469 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 SLC25A14O95258 325 aaPredicted RBP8.62□□□□□ -1.03
LIG4-204ENST00000611712 LRG1P02750 347 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 ZNF37AP17032 561 aaPredicted RBP8.62□□□□□ -1.03
LIG4-204ENST00000611712 STC1P52823 247 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 DIO3P55073 304 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 SERINC3Q13530 473 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 LPIN1Q14693 890 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 TAF1AQ15573 450 aaPredicted RBP8.62□□□□□ -1.03
LIG4-204ENST00000611712 UNC50Q53HI1 259 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 RABL3Q5HYI8 236 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 RAB41Q5JT25 222 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 TMEM214Q6NUQ4 689 aaKnown RBP8.62□□□□□ -1.03
LIG4-204ENST00000611712 PRSS55Q6UWB4 352 aaPredicted RBP8.62□□□□□ -1.03
LIG4-204ENST00000611712 TMEM26Q6ZUK4 368 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 TMEM126BQ8IUX1 230 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms