RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 CDAP32320 146 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 ADRA1BP35368 520 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 PTPN9P43378 593 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 ANXA11P50995 505 aaKnown RBP3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 ATXN3P54252 364 aaPredicted RBP3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 CASP9P55211 416 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 ASIC1P78348 528 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 ARF5P84085 180 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 DEUP1Q05D60 604 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 SGCGQ13326 291 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 TRA2AQ13595 282 aaKnown RBP eCLIP3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 FGFBP1Q14512 234 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 PDK1Q15118 436 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 RNPS1Q15287 305 aaKnown RBP3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 TRADDQ15628 312 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 SHROOM1Q2M3G4 852 aaPredicted RBP3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 GXYLT1Q4G148 440 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 CXorf66Q5JRM2 361 aaPredicted RBP3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 RBM20Q5T481 1227 aaKnown RBP3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 ISLR2Q6UXK2 745 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 MEX3BQ6ZN04 569 aaKnown RBP3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 CCDC73Q6ZRK6 1079 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 TMEM110Q86TL2 294 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 FAM160B2Q86V87 743 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 SYT12Q8IV01 421 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 ELOA2Q8IYF1 753 aaPredicted RBP3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 KDM1BQ8NB78 822 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 NHLRC2Q8NBF2 726 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 GMCL1P1Q8NEA9 526 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 OR52L2PQ8NGH6 319 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 TEKT4Q8WW24 435 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 PABPC5Q96DU9 382 aaKnown RBP3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 ARSGQ96EG1 525 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 CDCA5Q96FF9 252 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 CEP295NLQ96MC4 621 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 ZNF830Q96NB3 372 aaPredicted RBP3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 GNRHR2Q96P88 292 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 NEU1Q99519 415 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 H2AFJQ9BTM1 129 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 UTP14AQ9BVJ6 771 aaKnown RBP3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 R3HDMLQ9H3Y0 253 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 PLEKHA4Q9H4M7 779 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 PANK3Q9H999 370 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 KIF9Q9HAQ2 790 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 RANGRFQ9HD47 186 aaPredicted RBP3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 FANCFQ9NPI8 374 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 AURKAIP1Q9NWT8 199 aaPredicted RBP3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 KCTD5Q9NXV2 234 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 PLK2Q9NYY3 685 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 SEPT10Q9P0V9 454 aa3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 WBP11Q9Y2W2 641 aaKnown RBP3.95□□□□□ -1.78
IGHV3-29-201ENST00000604817 KIAA1217Q5T5P2 1943 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 A0A087WV48 116 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 EDDM13A0A1B0GTR0 161 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 A0A1W2PPC1 479 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 SMIM30A4D0T7 59 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 HTR3EA5X5Y0 456 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 OOEPA6NGQ2 149 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 LRRC72A6NJI9 287 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 NPIPB8E9PQR5 432 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 F5H697 171 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 SLC33A1O00400 549 aaPredicted RBP3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 FOXS1O43638 330 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 ZC3H11AO75152 810 aaKnown RBP eCLIP3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 LETM1O95202 739 aaPredicted RBP3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 MBPP02686 304 aaPredicted RBP3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 GBAP04062 536 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 SFTPCP11686 197 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 MMP9P14780 707 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 TMEM11P17152 192 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 ACHEP22303 614 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 SP100P23497 879 aaPredicted RBP3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 KIAA1024LP59773 190 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 B4GALNT1Q00973 533 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 DYRK1AQ13627 763 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 ARHGEF6Q15052 776 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 INAQ16352 499 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 PROSER3Q2NL68 480 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 PCGF3Q3KNV8 242 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 CEP55Q53EZ4 464 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 SERTAD4-AS1Q5TG53 156 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 SUSD4Q5VX71 490 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 ARMC6Q6NXE6 501 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 TMEM88Q6PEY1 159 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 NHLRC1Q6VVB1 395 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 PPP1R21Q6ZMI0 780 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 RNF207Q6ZRF8 634 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 MOB3CQ70IA8 216 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 TAOK1Q7L7X3 1001 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 GSTA5Q7RTV2 222 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 RNF144BQ7Z419 303 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 CEP57Q86XR8 500 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 P3H2Q8IVL5 708 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 ZNF34Q8IZ26 560 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 RBM15BQ8NDT2 890 aaKnown RBP3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 DENND6BQ8NEG7 585 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 BICD2Q8TD16 824 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 SGCDQ92629 289 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 EDAQ92838 391 aa3.94□□□□□ -1.78
IGHV3-29-201ENST00000604817 ARHGEF26Q96DR7 871 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms