RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 FKBPLQ9UIM3 349 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 ANAPC5Q9UJX4 755 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 GPR34Q9UPC5 381 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 VPS9D1Q9Y2B5 631 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 CA5BQ9Y2D0 317 aa9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 ZFC3H1O60293 1989 aaKnown RBP9.4□□□□□ -0.9
SQSTM1P1-201ENST00000603451 A0A0U1RQS6 177 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 TMEM202A6NGA9 273 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 E7ESA3 106 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 SLC30A4O14863 429 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 CHUKO15111 745 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 NUAK1O60285 661 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 TNFP01375 233 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 CEACAM5P06731 702 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 POLBP06746 335 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 ALPPL2P10696 532 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 JUNDP17535 347 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 TPH1P17752 444 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 PGAM1P18669 254 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 CSRP1P21291 193 aaKnown RBP9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 MGAT1P26572 445 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 MC4RP32245 332 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 RPL21P46778 160 aaKnown RBP9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 TTPAP49638 278 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 ITGA8P53708 1063 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 SESN2P58004 480 aaPredicted RBP9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 ILF3Q12906 894 aaKnown RBP eCLIP9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 EIF2B5Q13144 721 aaKnown RBP9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 GTF2H3Q13889 308 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 CCDC6Q16204 474 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 ALG11Q2TAA5 492 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 DNTTIP2Q5QJE6 756 aaKnown RBP9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 RNF187Q5TA31 235 aaPredicted RBP9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 STPG1Q5TH74 334 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 ALS2CLQ60I27 953 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 ENPP7Q6UWV6 458 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 PACS1Q6VY07 963 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 KANSL1Q7Z3B3 1105 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 PELI3Q8N2H9 469 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 EIF1ADQ8N9N8 165 aaKnown RBP9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 ZNF548Q8NEK5 533 aaPredicted RBP9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 OR13C4Q8NGS5 318 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 ZNF398Q8TD17 642 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 CALML6Q8TD86 181 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 SAP25Q8TEE9 199 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 STAMBPL1Q96FJ0 436 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 PDXPQ96GD0 296 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 TTC25Q96NG3 672 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 OR2M4Q96R27 311 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 TCF12Q99081 682 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 COPS8Q99627 209 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 TIMM29Q9BSF4 260 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 LGR4Q9BXB1 951 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 SMOC1Q9H4F8 434 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 ASB8Q9H765 288 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 VPS37BQ9H9H4 285 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 FGF22Q9HCT0 170 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 BPIFA1Q9NP55 256 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 SYBUQ9NX95 663 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 NLGN3Q9NZ94 848 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 CRLS1Q9UJA2 301 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 CDV3Q9UKY7 258 aaKnown RBP9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 CNOT6Q9ULM6 557 aaKnown RBP9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 FNDC3AQ9Y2H6 1198 aaKnown RBP9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 DNMT3AQ9Y6K1 912 aaPredicted RBP9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 CEP250Q9BV73 2442 aa9.39□□□□□ -0.91
SQSTM1P1-201ENST00000603451 WDR87Q6ZQQ6 2873 aa9.38□□□□□ -0.91
SQSTM1P1-201ENST00000603451 KNL1Q8NG31 2342 aa9.38□□□□□ -0.91
SQSTM1P1-201ENST00000603451 CABIN1Q9Y6J0 2220 aa9.38□□□□□ -0.91
SQSTM1P1-201ENST00000603451 BHMG1C9JSJ3 638 aaPredicted RBP9.38□□□□□ -0.91
SQSTM1P1-201ENST00000603451 LMO7DNF2Z398 122 aa9.38□□□□□ -0.91
SQSTM1P1-201ENST00000603451 SCAMP1O15126 338 aa9.38□□□□□ -0.91
SQSTM1P1-201ENST00000603451 TP73O15350 636 aa9.38□□□□□ -0.91
SQSTM1P1-201ENST00000603451 AQP9O43315 295 aa9.38□□□□□ -0.91
SQSTM1P1-201ENST00000603451 AP2A2O94973 939 aa9.38□□□□□ -0.91
SQSTM1P1-201ENST00000603451 SLC2A4P14672 509 aa9.38□□□□□ -0.91
SQSTM1P1-201ENST00000603451 VCLP18206 1134 aa9.38□□□□□ -0.91
SQSTM1P1-201ENST00000603451 OGNP20774 298 aaKnown RBP9.38□□□□□ -0.91
SQSTM1P1-201ENST00000603451 DGKAP23743 735 aa9.38□□□□□ -0.91
SQSTM1P1-201ENST00000603451 ACRV1P26436 265 aa9.38□□□□□ -0.91
SQSTM1P1-201ENST00000603451 FOXN2P32314 431 aa9.38□□□□□ -0.91
SQSTM1P1-201ENST00000603451 NSG1P42857 185 aa9.38□□□□□ -0.91
SQSTM1P1-201ENST00000603451 CLCNKAP51800 687 aa9.38□□□□□ -0.91
SQSTM1P1-201ENST00000603451 ADARP55265 1226 aaKnown RBP9.38□□□□□ -0.91
SQSTM1P1-201ENST00000603451 CUL1Q13616 776 aa9.38□□□□□ -0.91
SQSTM1P1-201ENST00000603451 SHBQ15464 509 aa9.38□□□□□ -0.91
SQSTM1P1-201ENST00000603451 CHRNA6Q15825 494 aa9.38□□□□□ -0.91
SQSTM1P1-201ENST00000603451 BCL7AQ4VC05 210 aa9.38□□□□□ -0.91
SQSTM1P1-201ENST00000603451 CCDC38Q502W7 563 aa9.38□□□□□ -0.91
SQSTM1P1-201ENST00000603451 SPANXN3Q5MJ09 141 aa9.38□□□□□ -0.91
SQSTM1P1-201ENST00000603451 TPRG1LQ5T0D9 272 aa9.38□□□□□ -0.91
SQSTM1P1-201ENST00000603451 GPRC6AQ5T6X5 926 aa9.38□□□□□ -0.91
SQSTM1P1-201ENST00000603451 MRNIPQ6NTE8 343 aa9.38□□□□□ -0.91
SQSTM1P1-201ENST00000603451 CASC4Q6P4E1 433 aa9.38□□□□□ -0.91
SQSTM1P1-201ENST00000603451 ZNF449Q6P9G9 518 aa9.38□□□□□ -0.91
SQSTM1P1-201ENST00000603451 RFLNAQ6ZTI6 216 aa9.38□□□□□ -0.91
SQSTM1P1-201ENST00000603451 CENPUQ71F23 418 aa9.38□□□□□ -0.91
SQSTM1P1-201ENST00000603451 LRRTM4Q86VH4 590 aa9.38□□□□□ -0.91
SQSTM1P1-201ENST00000603451 LRRC6Q86X45 466 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms