RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 SFTPA2Q8IWL1 248 aa17.02■□□□□ 0.32
HERC3-214ENST00000601319 SLC25A41Q8N5S1 370 aa17.02■□□□□ 0.32
HERC3-214ENST00000601319 CCDC110Q8TBZ0 833 aa17.02■□□□□ 0.32
HERC3-214ENST00000601319 ALS2CR12Q96Q35 445 aa17.02■□□□□ 0.32
HERC3-214ENST00000601319 C19orf43Q9BQ61 176 aa17.02■□□□□ 0.32
HERC3-214ENST00000601319 FICDQ9BVA6 458 aa17.02■□□□□ 0.32
HERC3-214ENST00000601319 FRMD8P1Q9BZ68 369 aaPredicted RBP17.02■□□□□ 0.32
HERC3-214ENST00000601319 TRIM39Q9HCM9 518 aa17.02■□□□□ 0.32
HERC3-214ENST00000601319 IL17CQ9P0M4 197 aa17.02■□□□□ 0.32
HERC3-214ENST00000601319 R3HDM2Q9Y2K5 976 aaKnown RBP17.02■□□□□ 0.32
HERC3-214ENST00000601319 ENTPD2Q9Y5L3 495 aa17.02■□□□□ 0.32
HERC3-214ENST00000601319 RNF215Q9Y6U7 377 aa17.02■□□□□ 0.32
HERC3-214ENST00000601319 ADAMTS20P59510 1910 aa17.02■□□□□ 0.31
HERC3-214ENST00000601319 ZFHX4Q86UP3 3567 aa17.01■□□□□ 0.31
HERC3-214ENST00000601319 CHUKO15111 745 aa17.01■□□□□ 0.31
HERC3-214ENST00000601319 USP12O75317 370 aa17.01■□□□□ 0.31
HERC3-214ENST00000601319 SLC25A14O95258 325 aaPredicted RBP17.01■□□□□ 0.31
HERC3-214ENST00000601319 RPLP0P05388 317 aaKnown RBP17.01■□□□□ 0.31
HERC3-214ENST00000601319 SPAM1P38567 509 aa17.01■□□□□ 0.31
HERC3-214ENST00000601319 P3H1Q32P28 736 aa17.01■□□□□ 0.31
HERC3-214ENST00000601319 MEI1Q5TIA1 1274 aa17.01■□□□□ 0.31
HERC3-214ENST00000601319 NAGSQ8N159 534 aa17.01■□□□□ 0.31
HERC3-214ENST00000601319 BLOC1S5Q8TDH9 187 aa17.01■□□□□ 0.31
HERC3-214ENST00000601319 LRRC45Q96CN5 670 aa17.01■□□□□ 0.31
HERC3-214ENST00000601319 RTP4Q96DX8 246 aa17.01■□□□□ 0.31
HERC3-214ENST00000601319 GFM1Q96RP9 751 aaKnown RBP17.01■□□□□ 0.31
HERC3-214ENST00000601319 LRRN3Q9H3W5 708 aa17.01■□□□□ 0.31
HERC3-214ENST00000601319 ARNT2Q9HBZ2 717 aa17.01■□□□□ 0.31
HERC3-214ENST00000601319 LRIT1Q9P2V4 623 aa17.01■□□□□ 0.31
HERC3-214ENST00000601319 ATXN10Q9UBB4 475 aa17.01■□□□□ 0.31
HERC3-214ENST00000601319 ZNHIT2Q9UHR6 403 aa17.01■□□□□ 0.31
HERC3-214ENST00000601319 FEZ2Q9UHY8 353 aaPredicted RBP17.01■□□□□ 0.31
HERC3-214ENST00000601319 PLEKHM1Q9Y4G2 1056 aa17.01■□□□□ 0.31
HERC3-214ENST00000601319 PCYT1BQ9Y5K3 369 aaPredicted RBP17.01■□□□□ 0.31
HERC3-214ENST00000601319 AK5Q9Y6K8 562 aa17.01■□□□□ 0.31
HERC3-214ENST00000601319 FAM208BQ5VWN6 2430 aa17■□□□□ 0.31
HERC3-214ENST00000601319 A0A1W2PQM1 296 aa17■□□□□ 0.31
HERC3-214ENST00000601319 TCRBV7S2A1N4TA0A589 114 aa17■□□□□ 0.31
HERC3-214ENST00000601319 GRID2O43424 1007 aa17■□□□□ 0.31
HERC3-214ENST00000601319 VEGFDO43915 354 aa17■□□□□ 0.31
HERC3-214ENST00000601319 BRINP1O60477 761 aa17■□□□□ 0.31
HERC3-214ENST00000601319 ECEL1O95672 775 aa17■□□□□ 0.31
HERC3-214ENST00000601319 AGTP01019 485 aa17■□□□□ 0.31
HERC3-214ENST00000601319 ZNF8P17098 575 aaPredicted RBP17■□□□□ 0.31
HERC3-214ENST00000601319 FASLGP48023 281 aa17■□□□□ 0.31
HERC3-214ENST00000601319 LSSP48449 732 aa17■□□□□ 0.31
HERC3-214ENST00000601319 CLCNKAP51800 687 aa17■□□□□ 0.31
HERC3-214ENST00000601319 MAZP56270 477 aaKnown RBP17■□□□□ 0.31
HERC3-214ENST00000601319 CLPPQ16740 277 aaPredicted RBP17■□□□□ 0.31
HERC3-214ENST00000601319 ARHGEF18Q6ZSZ5 1173 aa17■□□□□ 0.31
HERC3-214ENST00000601319 ADGRG6Q86SQ4 1221 aa17■□□□□ 0.31
HERC3-214ENST00000601319 LSMEM2Q8N112 164 aa17■□□□□ 0.31
HERC3-214ENST00000601319 ARL14Q8N4G2 192 aa17■□□□□ 0.31
HERC3-214ENST00000601319 FAM71DQ8N9W8 422 aa17■□□□□ 0.31
HERC3-214ENST00000601319 SNIP1Q8TAD8 396 aaKnown RBP17■□□□□ 0.31
HERC3-214ENST00000601319 LIN37Q96GY3 246 aaPredicted RBP17■□□□□ 0.31
HERC3-214ENST00000601319 POLR1BQ9H9Y6 1135 aa17■□□□□ 0.31
HERC3-214ENST00000601319 IL26Q9NPH9 171 aa17■□□□□ 0.31
HERC3-214ENST00000601319 LZTFL1Q9NQ48 299 aa17■□□□□ 0.31
HERC3-214ENST00000601319 SMOXQ9NWM0 555 aa17■□□□□ 0.31
HERC3-214ENST00000601319 RAXQ9Y2V3 346 aa17■□□□□ 0.31
HERC3-214ENST00000601319 PKP3Q9Y446 797 aa17■□□□□ 0.31
HERC3-214ENST00000601319 A0A087WV48 116 aa16.99■□□□□ 0.31
HERC3-214ENST00000601319 A6NCN8 305 aa16.99■□□□□ 0.31
HERC3-214ENST00000601319 TMX2-CTNND1H3BSU7 103 aa16.99■□□□□ 0.31
HERC3-214ENST00000601319 CASC3O15234 703 aaKnown RBP16.99■□□□□ 0.31
HERC3-214ENST00000601319 ZW10O43264 779 aa16.99■□□□□ 0.31
HERC3-214ENST00000601319 CCKBRP32239 447 aa16.99■□□□□ 0.31
HERC3-214ENST00000601319 MLLT3P42568 568 aaPredicted RBP16.99■□□□□ 0.31
HERC3-214ENST00000601319 GPR3P46089 330 aa16.99■□□□□ 0.31
HERC3-214ENST00000601319 GABREP78334 506 aa16.99■□□□□ 0.31
HERC3-214ENST00000601319 CCL7P80098 99 aa16.99■□□□□ 0.31
HERC3-214ENST00000601319 RPS6KA1Q15418 735 aa16.99■□□□□ 0.31
HERC3-214ENST00000601319 TAF1AQ15573 450 aaPredicted RBP16.99■□□□□ 0.31
HERC3-214ENST00000601319 PARP6Q2NL67 630 aa16.99■□□□□ 0.31
HERC3-214ENST00000601319 TBC1D25Q3MII6 688 aa16.99■□□□□ 0.31
HERC3-214ENST00000601319 ATP13A5Q4VNC0 1218 aa16.99■□□□□ 0.31
HERC3-214ENST00000601319 KCTD11Q693B1 232 aa16.99■□□□□ 0.31
HERC3-214ENST00000601319 CHST15Q7LFX5 561 aaPredicted RBP16.99■□□□□ 0.31
HERC3-214ENST00000601319 SLC13A5Q86YT5 568 aaPredicted RBP16.99■□□□□ 0.31
HERC3-214ENST00000601319 SFRP1Q8N474 314 aa16.99■□□□□ 0.31
HERC3-214ENST00000601319 TRIM58Q8NG06 486 aa16.99■□□□□ 0.31
HERC3-214ENST00000601319 ATXN7L3BQ96GX2 97 aa16.99■□□□□ 0.31
HERC3-214ENST00000601319 TMEM121Q9BTD3 319 aa16.99■□□□□ 0.31
HERC3-214ENST00000601319 OR2AG1Q9H205 316 aa16.99■□□□□ 0.31
HERC3-214ENST00000601319 SYNDIG1Q9H7V2 258 aa16.99■□□□□ 0.31
HERC3-214ENST00000601319 GRPEL1Q9HAV7 217 aa16.99■□□□□ 0.31
HERC3-214ENST00000601319 BPIFA1Q9NP55 256 aa16.99■□□□□ 0.31
HERC3-214ENST00000601319 TMPRSS11EQ9UL52 423 aa16.99■□□□□ 0.31
HERC3-214ENST00000601319 PCDHGA8Q9Y5G5 932 aa16.99■□□□□ 0.31
HERC3-214ENST00000601319 ZFYVE26Q68DK2 2539 aa16.98■□□□□ 0.31
HERC3-214ENST00000601319 CCDC187A0A096LP49 1063 aa16.98■□□□□ 0.31
HERC3-214ENST00000601319 GLYATL1P3A0A0U1RQE8 302 aa16.98■□□□□ 0.31
HERC3-214ENST00000601319 PRR19A6NJB7 356 aa16.98■□□□□ 0.31
HERC3-214ENST00000601319 GAPDHSO14556 408 aaPredicted RBP16.98■□□□□ 0.31
HERC3-214ENST00000601319 LIASO43766 372 aa16.98■□□□□ 0.31
HERC3-214ENST00000601319 KRT37O76014 449 aa16.98■□□□□ 0.31
HERC3-214ENST00000601319 ACP5P13686 325 aa16.98■□□□□ 0.31
HERC3-214ENST00000601319 SLC2A4P14672 509 aa16.98■□□□□ 0.31
HERC3-214ENST00000601319 LPOP22079 712 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms