RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 GRID2O43424 1007 aa16.81■□□□□ 0.28
SCAF1-204ENST00000601038 AKR1B10O60218 316 aa16.81■□□□□ 0.28
SCAF1-204ENST00000601038 ACP5P13686 325 aa16.81■□□□□ 0.28
SCAF1-204ENST00000601038 F3P13726 295 aa16.81■□□□□ 0.28
SCAF1-204ENST00000601038 UGT1A3P35503 534 aa16.81■□□□□ 0.28
SCAF1-204ENST00000601038 PPM1FP49593 454 aaPredicted RBP16.81■□□□□ 0.28
SCAF1-204ENST00000601038 RAB15P59190 212 aa16.81■□□□□ 0.28
SCAF1-204ENST00000601038 AP1B1Q10567 949 aa16.81■□□□□ 0.28
SCAF1-204ENST00000601038 NFATC3Q12968 1075 aa16.81■□□□□ 0.28
SCAF1-204ENST00000601038 TRIM14Q14142 442 aa16.81■□□□□ 0.28
SCAF1-204ENST00000601038 GALNT3Q14435 633 aa16.81■□□□□ 0.28
SCAF1-204ENST00000601038 KIR2DS5Q14953 304 aa16.81■□□□□ 0.28
SCAF1-204ENST00000601038 PDK1Q15118 436 aa16.81■□□□□ 0.28
SCAF1-204ENST00000601038 TBR1Q16650 682 aa16.81■□□□□ 0.28
SCAF1-204ENST00000601038 DCAF12Q5T6F0 453 aa16.81■□□□□ 0.28
SCAF1-204ENST00000601038 ARHGAP22Q7Z5H3 698 aa16.81■□□□□ 0.28
SCAF1-204ENST00000601038 NT5DC3Q86UY8 548 aa16.81■□□□□ 0.28
SCAF1-204ENST00000601038 FAM129CQ86XR2 697 aa16.81■□□□□ 0.28
SCAF1-204ENST00000601038 BMPERQ8N8U9 685 aa16.81■□□□□ 0.28
SCAF1-204ENST00000601038 IMP4Q96G21 291 aaKnown RBP16.81■□□□□ 0.28
SCAF1-204ENST00000601038 TRIB3Q96RU7 358 aa16.81■□□□□ 0.28
SCAF1-204ENST00000601038 ZMYND15Q9H091 742 aa16.81■□□□□ 0.28
SCAF1-204ENST00000601038 MAGEE1Q9HCI5 957 aa16.81■□□□□ 0.28
SCAF1-204ENST00000601038 ZNHIT6Q9NWK9 470 aaKnown RBP16.81■□□□□ 0.28
SCAF1-204ENST00000601038 ATXN10Q9UBB4 475 aa16.81■□□□□ 0.28
SCAF1-204ENST00000601038 GPR89AB7ZAQ6 455 aa16.8■□□□□ 0.28
SCAF1-204ENST00000601038 APOL1O14791 398 aa16.8■□□□□ 0.28
SCAF1-204ENST00000601038 SLC28A2O43868 658 aa16.8■□□□□ 0.28
SCAF1-204ENST00000601038 SNX2O60749 519 aa16.8■□□□□ 0.28
SCAF1-204ENST00000601038 SLC25A14O95258 325 aaPredicted RBP16.8■□□□□ 0.28
SCAF1-204ENST00000601038 GPR89BP0CG08 455 aa16.8■□□□□ 0.28
SCAF1-204ENST00000601038 ITGB6P18564 788 aa16.8■□□□□ 0.28
SCAF1-204ENST00000601038 CLCNKAP51800 687 aa16.8■□□□□ 0.28
SCAF1-204ENST00000601038 EPHA4P54764 986 aa16.8■□□□□ 0.28
SCAF1-204ENST00000601038 DCDC1P59894 354 aa16.8■□□□□ 0.28
SCAF1-204ENST00000601038 CYP4F2P78329 520 aa16.8■□□□□ 0.28
SCAF1-204ENST00000601038 NFATC2Q13469 925 aa16.8■□□□□ 0.28
SCAF1-204ENST00000601038 LRRC38Q5VT99 294 aa16.8■□□□□ 0.28
SCAF1-204ENST00000601038 TMC3Q7Z5M5 1100 aa16.8■□□□□ 0.28
SCAF1-204ENST00000601038 IL22RA1Q8N6P7 574 aa16.8■□□□□ 0.28
SCAF1-204ENST00000601038 AVL9Q8NBF6 648 aa16.8■□□□□ 0.28
SCAF1-204ENST00000601038 HTR3CQ8WXA8 447 aa16.8■□□□□ 0.28
SCAF1-204ENST00000601038 NCSTNQ92542 709 aa16.8■□□□□ 0.28
SCAF1-204ENST00000601038 AGAP3Q96P47 875 aa16.8■□□□□ 0.28
SCAF1-204ENST00000601038 TEFMQ96QE5 360 aaKnown RBP16.8■□□□□ 0.28
SCAF1-204ENST00000601038 ZSCAN5AQ9BUG6 496 aa16.8■□□□□ 0.28
SCAF1-204ENST00000601038 SPATA16Q9BXB7 569 aa16.8■□□□□ 0.28
SCAF1-204ENST00000601038 SLC12A9Q9BXP2 914 aa16.8■□□□□ 0.28
SCAF1-204ENST00000601038 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.8■□□□□ 0.28
SCAF1-204ENST00000601038 BRD8Q9H0E9 1235 aa16.8■□□□□ 0.28
SCAF1-204ENST00000601038 SLC25A51Q9H1U9 297 aa16.8■□□□□ 0.28
SCAF1-204ENST00000601038 TRIM39Q9HCM9 518 aa16.8■□□□□ 0.28
SCAF1-204ENST00000601038 RAD18Q9NS91 495 aa16.8■□□□□ 0.28
SCAF1-204ENST00000601038 STARD5Q9NSY2 213 aa16.8■□□□□ 0.28
SCAF1-204ENST00000601038 ADGRG1Q9Y653 693 aa16.8■□□□□ 0.28
SCAF1-204ENST00000601038 PPP1R12AO14974 1030 aaPredicted RBP16.79■□□□□ 0.28
SCAF1-204ENST00000601038 MTA2O94776 668 aa16.79■□□□□ 0.28
SCAF1-204ENST00000601038 FAM87AP0C7U9 286 aa16.79■□□□□ 0.28
SCAF1-204ENST00000601038 ZFXP17010 805 aaPredicted RBP16.79■□□□□ 0.28
SCAF1-204ENST00000601038 ZNF8P17098 575 aaPredicted RBP16.79■□□□□ 0.28
SCAF1-204ENST00000601038 MC2RQ01718 297 aa16.79■□□□□ 0.28
SCAF1-204ENST00000601038 SLC14A2Q15849 920 aa16.79■□□□□ 0.28
SCAF1-204ENST00000601038 SNAP47Q5SQN1 464 aa16.79■□□□□ 0.28
SCAF1-204ENST00000601038 ANKS6Q68DC2 871 aa16.79■□□□□ 0.28
SCAF1-204ENST00000601038 PDPK2PQ6A1A2 396 aa16.79■□□□□ 0.28
SCAF1-204ENST00000601038 KDELC2Q7Z4H8 507 aa16.79■□□□□ 0.28
SCAF1-204ENST00000601038 PHYKPLQ8IUZ5 450 aa16.79■□□□□ 0.28
SCAF1-204ENST00000601038 RHOT2Q8IXI1 618 aa16.79■□□□□ 0.28
SCAF1-204ENST00000601038 CACNA2D3Q8IZS8 1091 aa16.79■□□□□ 0.28
SCAF1-204ENST00000601038 GPR26Q8NDV2 337 aa16.79■□□□□ 0.28
SCAF1-204ENST00000601038 TADA1Q96BN2 335 aa16.79■□□□□ 0.28
SCAF1-204ENST00000601038 OLFM3Q96PB7 478 aa16.79■□□□□ 0.28
SCAF1-204ENST00000601038 CEP41Q9BYV8 373 aa16.79■□□□□ 0.28
SCAF1-204ENST00000601038 FAM117AQ9C073 453 aa16.79■□□□□ 0.28
SCAF1-204ENST00000601038 OR2AG1Q9H205 316 aa16.79■□□□□ 0.28
SCAF1-204ENST00000601038 EPB41L1Q9H4G0 881 aa16.79■□□□□ 0.28
SCAF1-204ENST00000601038 NFKBIL1Q9UBC1 381 aaPredicted RBP16.79■□□□□ 0.28
SCAF1-204ENST00000601038 CPNE7Q9UBL6 633 aa16.79■□□□□ 0.28
SCAF1-204ENST00000601038 SHOC2Q9UQ13 582 aa16.79■□□□□ 0.28
SCAF1-204ENST00000601038 HEMK1Q9Y5R4 338 aaPredicted RBP16.79■□□□□ 0.28
SCAF1-204ENST00000601038 A8MU76 341 aa16.78■□□□□ 0.28
SCAF1-204ENST00000601038 CHUKO15111 745 aa16.78■□□□□ 0.28
SCAF1-204ENST00000601038 CBFA2T2O43439 604 aa16.78■□□□□ 0.28
SCAF1-204ENST00000601038 CDK18Q07002 472 aa16.78■□□□□ 0.28
SCAF1-204ENST00000601038 ZNF569Q5MCW4 686 aa16.78■□□□□ 0.28
SCAF1-204ENST00000601038 FAM182AQ5T1J6 154 aa16.78■□□□□ 0.28
SCAF1-204ENST00000601038 ALS2CLQ60I27 953 aa16.78■□□□□ 0.28
SCAF1-204ENST00000601038 NPNTQ6UXI9 565 aa16.78■□□□□ 0.28
SCAF1-204ENST00000601038 PRICKLE2Q7Z3G6 844 aa16.78■□□□□ 0.28
SCAF1-204ENST00000601038 ADGRG6Q86SQ4 1221 aa16.78■□□□□ 0.28
SCAF1-204ENST00000601038 TRAM1L1Q8N609 369 aa16.78■□□□□ 0.28
SCAF1-204ENST00000601038 GLYATL1Q969I3 302 aa16.78■□□□□ 0.28
SCAF1-204ENST00000601038 RTP4Q96DX8 246 aa16.78■□□□□ 0.28
SCAF1-204ENST00000601038 CCDC42Q96M95 316 aa16.78■□□□□ 0.28
SCAF1-204ENST00000601038 SRPK1Q96SB4 655 aaKnown RBP16.78■□□□□ 0.28
SCAF1-204ENST00000601038 CHP1Q99653 195 aa16.78■□□□□ 0.28
SCAF1-204ENST00000601038 ZPBPQ9BS86 351 aa16.78■□□□□ 0.28
SCAF1-204ENST00000601038 GPR63Q9BZJ6 419 aa16.78■□□□□ 0.28
SCAF1-204ENST00000601038 SPRY4Q9C004 299 aa16.78■□□□□ 0.28
SCAF1-204ENST00000601038 ARFGAP3Q9NP61 516 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms